Ictalurus furcatus (blue catfish): 128614441
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Entry
128614441 CDS
T09387
Symbol
rae1
Name
(RefSeq) mRNA export factor isoform X1
KO
K14298
mRNA export factor
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128614441 (rae1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128614441 (rae1)
03036 Chromosome and associated proteins [BR:
ifu03036
]
128614441 (rae1)
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128614441 (rae1)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
128614441 (rae1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WDR55
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
ANAPC4_WD40
WD40_RFWD3
Beta-prop_IFT140_1st
eIF2A
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_SPT8
Exonuc_X-T_C
Motif
Other DBs
NCBI-GeneID:
128614441
NCBI-ProteinID:
XP_053491693
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Position
11:23870439..23881271
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AA seq
369 aa
AA seq
DB search
MSLFGTSSGFGAGGTGVFGNTTTDSHNPMKDVEVTSPPDDSISCLAFSPPTLPGNFLIGG
SWANDVRCWEVQDNGQTVPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQA
MQIAQHEGPIRTIHWIKAPNYSCVMTGSWDKTLKFWDTRSPNPMMSLQMPERCYCADVVY
PMAAVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTTTPQDIYAVNAIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPITACCFNNNGNIFAYSSSYDWSKGHEYYNPQKKNYIFLRNAAE
ELKPRNKKW
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgtttggtacaagttctggatttggggctggaggcacaggtgtttttggcaac
accacgacagacagtcataatccaatgaaggatgttgaagtgacttccccacccgatgac
agcataagctgcttggcctttagccctccaacgttgcctggaaacttcttgattggtggc
tcttgggccaatgatgtgagatgctgggaggttcaggataacggccagacagtccctaaa
gctcagcagatgcacacgggccctgtgctggatgtctgctggagtgatgatggaagtaaa
gtctttacagcctcctgtgacaaaactgctaagatgtgggatctgaacagcaaccaggcc
atgcagatagcacaacatgaaggtccaatcaggacaatccactggataaaagccccaaac
tacagctgtgtcatgacgggtagttgggacaagacactgaaattttgggacactcgctct
ccaaaccccatgatgtccctgcagatgccagagagatgttactgtgctgatgtggtgtat
cctatggctgcggtggccactgcagaacgagggctaattgtgtaccagctagagaatcag
ccatctgagttccggcgtatagattcacctctgaaacatcagcaccgctgtgtggccatc
tttaaggacaaacaaaataaacctactggatttgcactgggcagtattgaggggcgagtg
gccattcactatattaacccacccaatcccgccaaggataatttcaccttcaagtgccat
agatctaatggaacaaacaccaccacaccccaggatatttacgctgtcaatgccattgct
ttccatcccgtgcacggcacgttggccacggtgggctctgacggtcgcttcagtttctgg
gacaaggatgctcgcacgaagctgaaaacctccgagcagcttgatcagccgatcacagct
tgctgttttaacaacaatggcaacatctttgcctacagctccagctatgattggtccaag
ggacatgagtactacaacccccagaagaagaactacatttttctgcgaaatgccgctgag
gaactcaagcctcgaaacaagaaatggtga
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integrated database retrieval system
