Ictalurus furcatus (blue catfish): 128614500
Help
Entry
128614500 CDS
T09387
Name
(RefSeq) contactin-4 isoform X1
KO
K06761
contactin 3/4/5/6
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ifu04515
]
128614500
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ifu00537
]
128614500
Cell adhesion molecules [BR:
ifu04515
]
Immunoglobulin superfamily
Contactins
128614500
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ifu00537
]
Others
128614500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_5
Sp38
Ig_DSCAM-DSCAML_C
Ig_4
Pur_ac_phosph_N
Tissue_fac
C2-set
Motif
Other DBs
NCBI-GeneID:
128614500
NCBI-ProteinID:
XP_053491808
LinkDB
All DBs
Position
11:complement(14215623..14387105)
Genome browser
AA seq
1029 aa
AA seq
DB search
MKHDFLFFFFLNMPTWTWCCIFAERIIQYGPVFTQEPSDSVFPLSTEDPKIFINCKAKGN
PLPHYRWKFNGKDFDTYTDLNYSLVEGNLLINNPQAMKDGGSYQCIATNAFGTILSRKAK
VEFAYLQNFTSKARNAVSVREGQAVVLLCGPPLHFGEVRYSWIFNGNPSVLIQDNRRFVS
QRTGNLYIAKMEPSDAGNYTCVVKNLMTNSTVYSSPTPVVLRQDDVMGEYEPKIEVQFEE
MLHVVRGSSVRLECFALGNPVPSISWRRADRSPFPGKMKINQSNGVLEIPYFRPEDAGFY
ECVAENSRGHSIAKGQLIFDDVEHLHWVQTLHDAYMAIDANLHWECRANGKPQPVYRWLK
NGQVMVSKDRIRINGGKLMLLKVNLEDSGMYQCLAENEHSVVYASAELKVVAFPPDFSKS
PVKKSTLVQKGGEVIIECRPHASPKASFSWRKEGDLLKNSERRTISEDGTLRITNVSESD
AGRYTCVAHNLFGVARSTGTLMVKEPTKITVPPLSMDASLGESIVLSCRVSRDSNMDLIF
KWFFNGKLVDFSRHEHFEMIGGGVSGDIMVRNVQLKHSGKYVCMVHTAMDSVSAAADLIV
RGPPGCPERVLVGEVTERTVQLSWRPSPDNHSPITNYVVQARSHFLIGWQAVKTVPHAVP
GQMTHAIAVGLSPWVQYKFRVAAMNSVGMGEPSAPSEAVLTKAAVPEVAPTNVRGGGGSR
SELVIMWEPVPEELQNGEEFGYVVAFRLLGSLVWMQTVVPSVDASRYVFKNDTFPPLSQF
EVKVGEYNSIGEGPYSPISVVYSAAEEPTVAPTKVWAHSLSFSELQVFWDPILPNHSKST
ILGYQVLLWEEGSLEREAMKERVIRSPAYITGLKGSTLYLISVRAHNSGGIGPTSAVINM
TTKKPPPSQSPGNIEWNLTNSKIFLHWQHVKAMDNESEVTGYKVMYRQNWHRGTSIVETN
QTSLELQVPSEDLLIQIKTLSDGGDGSYSSPIHIPKMSNLNSRGYFSSDANKLVHIHKVA
FLMLAWLFL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatgattttttattttttttttttctgaatatgccaacatggacctggtgttgc
atttttgcagagagaattattcaatatggacctgttttcacccaagagcctagtgacagt
gtttttccgctgagcactgaagaccccaagatattcatcaactgcaaagccaaaggaaat
ccgctgccccattacaggtggaaattcaacggaaaagatttcgacacttacactgatttg
aactacagcctagtagagggcaacctcttgatcaataacccacaggcgatgaaagacgga
ggatcttaccagtgtattgccactaatgcctttggaaccatcctgagccgcaaggccaaa
gtggagtttgcctatcttcagaatttcactagcaaggccagaaatgcagtctcagtaaga
gaaggccaggctgttgtgcttctgtgtggcccaccactccattttggagaggttagatat
tcatggatcttcaatggtaatcccagtgtcctcatccaggataatcggcgctttgtgtcc
cagaggacagggaacctgtacatcgccaaaatggagccatctgatgcgggcaactatacg
tgtgtggtaaagaacttgatgaccaatagcaccgtgtacagctcgcccactcctgtggtg
ctgcgccaggatgatgtgatgggtgaatacgagcctaaaattgaagtccagtttgaagaa
atgctgcatgtcgtcagaggatcgtcggttagactggagtgcttcgctctaggaaatcca
gtgccgtctatctcttggagaagagcagacagaagcccttttcctggaaagatgaaaatc
aatcaatcaaatggcgtcctagagatcccttatttccggcctgaggatgctggcttttat
gaatgtgtggcagagaactccagaggccacagtattgcaaaaggacaactcatatttgat
gatgtggaacatctgcattgggtccagacactgcatgatgcctacatggccatagatgcc
aatttgcactgggagtgcagggctaatgggaaaccccagccggtgtacagatggcttaaa
aatggacaggtcatggtgtctaaggacagaatccgcattaatggaggcaagctcatgctc
ttgaaagttaacctagaggattcggggatgtatcagtgtttggccgagaatgagcatagt
gtcgtttatgccagtgccgaactcaaagttgtagcttttcctccagacttttctaaaagt
ccagtgaagaagtccacgttggttcaaaaaggaggtgaagtcatcattgaatgccggcca
catgcatcccccaaggcatccttctcatggaggaaagaaggtgatctgctgaaaaacagt
gagagaaggacaatctcagaggatggcactctgcgtattaccaatgtgagtgagtcagat
gcaggtagatacacatgtgtggcgcacaacctgttcggcgtggccaggagcacaggaaca
ctgatggtcaaagaaccaaccaaaattacagttcctccactaagtatggatgccagtttg
ggtgagagcattgttctgtcatgtagggtgtccagagactccaacatggacctcatcttc
aagtggttcttcaacgggaaacttgttgatttcagccgccatgaacactttgagatgatt
ggagggggagtatccggtgacatcatggtacgtaatgttcagctaaaacactctgggaaa
tatgtgtgcatggtccatacagcgatggacagtgtctcggctgcagctgatttgatagtc
agagggccccctggttgccctgagcgagttttggtgggggaagtcactgaacggacagtt
cagctctcatggcgtcccagtcctgacaatcatagccccatcacaaattatgtagtgcag
gcccgaagtcatttcttgattggctggcaggctgtaaaaacagttcctcatgctgtgcct
gggcagatgacacatgctattgcagtgggcttaagcccatgggttcagtacaagtttagg
gtggcagccatgaacagtgtcggcatgggtgagcccagtgccccatctgaggctgttctc
actaaggcagcagttcctgaggttgctccaaccaatgtgagaggaggtggtggaagccgc
agcgaactggtgattatgtgggagcctgttccagaagaactacagaatggagaagaattt
ggatatgtggtagcctttcgtttacttggttctctggtttggatgcagaccgtggtgccc
tcagtggatgcatcccgatatgtgtttaaaaatgacacctttcctccactctcacagttc
gaggtgaaggtgggagagtacaacagcattggagaaggaccctatagccctatatctgtt
gtctactcagcagcggaagaacccactgtagcccctactaaagtgtgggcacatagtctt
tccttctcagaactgcaggttttctgggatcccatcctgccaaaccatagcaaatccaca
atcttaggataccaggtgctgttgtgggaggagggctcattagagcgtgaggcaatgaag
gaaagggtcataagaagcccagcttatatcacaggcctgaagggcagcacgctgtatcta
atctcagtcagagctcacaacagtggtggaattggacctaccagtgctgtcatcaacatg
acaacaaagaaaccgcctccaagccagtctccagggaatattgagtggaacttgacaaac
tccaagatctttttgcattggcagcatgtaaaggcaatggacaatgaatctgaagtaaca
ggctacaaggtgatgtaccgtcaaaactggcacagagggaccagcatagtggaaacaaat
cagacgtcattggagctacaggttccatcagaagatctgcttatacagatcaaaacctta
agtgatggaggagatggcagctacagcagtcctattcacataccaaagatgtccaatctg
aactcaaggggctacttcagctctgatgcaaacaagctggtccatatccacaaagtagca
tttcttatgctagcatggctatttctgtag
DBGET
integrated database retrieval system
