Ictalurus furcatus (blue catfish): 128614636
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Entry
128614636 CDS
T09387
Symbol
mars1
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic isoform X1
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu00450
Selenocompound metabolism
ifu00970
Aminoacyl-tRNA biosynthesis
ifu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
128614636 (mars1)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
128614636 (mars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ifu01007
]
128614636 (mars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ifu03016
]
128614636 (mars1)
Enzymes [BR:
ifu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
128614636 (mars1)
Amino acid related enzymes [BR:
ifu01007
]
Aminoacyl-tRNA synthetase
Class I (U)
128614636 (mars1)
Transfer RNA biogenesis [BR:
ifu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
128614636 (mars1)
Prokaryotic type
Other AARSs
128614636 (mars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
Anticodon_3
GST_N_5
tRNA-synt_1
GST_C_3
GST_C_2
DUF4404
Motif
Other DBs
NCBI-GeneID:
128614636
NCBI-ProteinID:
XP_053492094
LinkDB
All DBs
Position
11:complement(19729058..19751368)
Genome browser
AA seq
1467 aa
AA seq
DB search
MKLFVSEGSPQCVKVLAAREHTGQQCDVQLLGHEERVVSFLSRPVLPAALLPSGKQLFSA
NAICQYLFEVGGKEITDTSRQLLEWEATELQPVLLQALHVAVLQGKSSEAGTLLKKPLSW
LEQYLSGKSTQFLTADTVEVADIVLWAALYPVLSNPALEAGELRSVRGWFDRVGQLPACT
KAVQKILPGKDLNALKNFLQKQPAPHSQRRENLPNETDDAEHVITEEEIEVAAQAWSKGL
AECHDIMERQHPILPKEGKRNVLVTSALPYVNNVPHLGNIIGCVLSADVFSRYGRLRGWN
LLYLCGTDEYGTATENKALEEGLTPQEICDKYFVVHEAIYKWFQIDFDFFGRTTTPQQTE
ISQNIFFRLLERGFLNEDTVEQLRCEKCQRFLADRFVEGGCPHCAYPEARGDQCDKCSRL
INAVELKNPQCKVCGETPVIRSSKHLFLDLPKLEGELEKWLEQSLNTGDWTANARQITRS
WIRDGLKPRCITRDLKWGTPVPLPDYSEKVFYVWFDAPIGYLSITANYTSEWEKWWKNPQ
QVELYNFMAKDNVPFHSVVFPCSLLGAQDNYTLVNHLVATEYLNYEDTKFSKSRGVGVFG
DMAKDTGIPSDVWRFYLTYVRPESQDSSFSWADLALKNNSELLNNLGNFINRAGMFVSKF
FNSCVPEIVLQDEDKRLIAQVSWELKQYIQLLDKVRIRDALKCILNISRHGNQYIQTSEP
WKKIKGGDEDRKRAGTVTGLSVNVACLLSAMLEPYMPTVSQTIRTQLQAPDNCAFAMLGA
EGCFLRSLSTGHQIGTVSPLFQKLEPEQIEILRKKFGGQQPEEETPMGKTEDTEHVITPK
EIEVAAQAWSKGLAECHDIIERKHPILPKEGKRNVLVTSALPYVNNVPHLGNIIGCVLSA
DVFSRYGRLRGWNLLYLCGTDEYGTATENKALEEGLTPQEICDKYFVVHEAIYKWFQIDF
DFFGRTTTPQQTEISQNIFFRLLERGFLNEDTVEQLRCEKCQRFLADRFVEGGCPHCAYP
EARGDQCDKCSRLINAVELKNPQCKVCGETPVIRSSKHLFLDLPKLEGELEKWLEQSLNT
GDWTANARQITRSWIRDGLKPRCITRDLKWGTPVPLPDYSEKVFYVWFDAPIGYLSITAN
YTSEWEKWWKNPQQVELYNFMAKDNVPFHSVVFPCSLLGAQDNYTLVNHLVATEYLNYED
TKFSKSRGVGVFGDMAKDTGIPSDVWRFYLTYVRPESQDSSFSWADLALKNNSELLNNLG
NFINRAGMFVSKFFNSCVPEIVLQDEDKRLIAQVSWELKQYIQLLDKVRIRDALKCILNI
SRHGNQYIQTSEPWKKIKGGDEDRKRAGTVTGLSVNVACLLSAMLEPYMPTVSQTIRTQL
QAPDNCAFAMLGAEGCFLRSLPTGHQIGTVSPLFQKLEPEQIEILRKKFGGQQPGEETPT
GKGPSDKSTAETKPPTAAAPTASQGKK
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtttgtgagtgaaggcagtccgcagtgtgtgaaggtgctggcggcgcgcgag
cacaccggacagcagtgtgacgtgcagctgctcggccacgaggaacgggtggtgtccttc
ctgagtcgcccagtcctgcctgctgcgctgttacccagcggcaagcaacttttcagtgct
aatgccatctgccaatatctgttcgaggttggtgggaaagagatcaccgatactagcagg
cagttattggaatgggaagcaacagaattgcagcctgtgctgcttcaggccctccatgtg
gcagtgcttcaggggaagagcagcgaggctggcacactgctgaaaaaacctctgagctgg
ctggagcagtatctgagtggaaaatccacacagttcctaactgcagacacagtcgaagtg
gcagacatcgtcttgtgggctgcactgtaccccgttctgtctaacccggctttggaagct
ggtgagctgcgttctgttcgaggttggtttgaccgtgtaggtcagctcccagcatgcacc
aaagcagtgcagaaaattctgccaggcaaagaccttaatgctctgaagaatttccttcag
aagcaaccagctccacactcacagcgaagagagaacctgcccaatgagactgatgatgct
gagcatgtgattactgaggaggagattgaggtagctgctcaggcttggagtaaaggactg
gcagagtgtcatgatatcatggaacggcaacaccctatcttacctaaggaggggaagcgt
aatgtgctggtcaccagtgcactgccgtatgtcaacaacgtgcctcaccttggcaacatc
atcggttgcgtgctcagtgctgatgtattctccagatacggccgtttgcgtggctggaac
ttgctgtatctgtgcgggacagacgagtatggcactgcaaccgagaacaaggctcttgag
gagggtctaacgccccaggagatatgcgacaaatactttgttgtccacgaggccatctac
aagtggttccagatcgactttgacttttttggccgcaccaccactccacaacagacagaa
atttcgcagaacattttctttcgtttactcgagcgtggatttctgaacgaggacacagtg
gagcagctgcgctgtgagaagtgccagcgcttcctagctgaccgctttgtggagggtggg
tgtcctcactgcgcatatcctgaagccagaggagaccagtgtgataagtgcagccgactc
attaacgctgtagagctcaagaatcctcagtgtaaggtgtgtggagagactcctgtgatt
cgcagctctaagcacttgttcctcgacctgcccaagctggaaggcgagttggagaagtgg
ctggagcagtctttaaatactggcgactggacagctaacgctaggcaaatcacccgctca
tggataagagatggtctgaagccacgctgcatcacacgagatctgaagtgggggacacct
gtaccactcccagattatagtgagaaggtcttttatgtctggttcgatgcccccattggc
tacctctccataaccgccaactacaccagtgaatgggagaaatggtggaagaacccgcaa
caggtggagctgtacaacttcatggcaaaagacaatgttccattccacagtgtggttttc
ccctgctctctgctcggggcacaggacaactacacactcgtcaaccatctcgtcgctaca
gaatatttgaactatgaggacacaaagttctcaaagagccgtggtgtgggagtgtttgga
gacatggctaaagacacgggcattccatctgatgtttggcggttctaccttacctacgtg
agacctgagagccaagactcttccttctcttgggctgacctggctctgaagaacaactcc
gagctgctcaataacctgggcaattttatcaacagggcaggcatgtttgtgagtaagttc
tttaatagctgtgtgccggagattgttctgcaggatgaagacaagcgtctcattgctcag
gtgtcctgggagctcaagcagtacatccagttgctggacaaagtcaggattcgcgatgcc
ctgaagtgcattctcaacatctctcgtcacggcaaccagtatattcagaccagcgaaccc
tggaagaagattaaaggaggagatgaggacaggaaacgtgcaggcacagtaactggtttg
tctgtgaatgtggcgtgtctcctgtcggccatgttggagccgtacatgcccacagtcagt
cagaccatccgtacccagctgcaagctccggataattgtgcctttgccatgctgggtgct
gagggatgtttcctccgcagcctctcaaccggccaccaaatcggcacggtaagccctctg
ttccagaagctggagcctgagcaaattgagatcctgaggaagaaatttggaggacaacag
ccggaggaggagacccctatgggaaagactgaagacactgagcatgtgatcacgccaaag
gagattgaggtagctgctcaggcttggagtaaaggattggcagagtgtcatgatatcata
gaaaggaaacaccctatcttgcctaaggaagggaagcgtaatgtgctggtcaccagtgca
ctgccgtatgtcaacaatgtgcctcacctcggcaacatcatcggttgcgtgctcagcgct
gatgtattctccagatacggccgtttgcgtggctggaacttgctgtatctgtgcgggacg
gacgagtatggcactgcaaccgagaacaaggctcttgaggagggtctaactccccaggag
atatgcgacaaatactttgttgtccacgaggccatctacaagtggttccagatcgacttt
gacttttttggccgcaccaccactccacaacagacagaaatttcgcagaacattttcttt
cgtttactcgagcgtggatttctgaacgaggacacagtggagcagctgcgctgtgagaag
tgccagcgcttcctagctgaccgctttgtggagggtgggtgtcctcactgcgcatatcct
gaagccagaggagaccagtgtgataagtgcagccgactcattaacgctgtagagctcaag
aatcctcagtgtaaggtgtgtggagagactcctgtgattcgcagctctaagcacttgttc
ctcgacctgcccaagctggaaggcgagttggagaagtggctggagcagtctttaaatact
ggcgactggacagctaacgctaggcaaatcacccgctcatggataagagatggtctgaag
ccacgctgcatcacacgagatctgaagtgggggacacctgtaccactcccagattatagt
gagaaggtcttttatgtctggttcgatgcccccattggctacctctccataaccgccaac
tacaccagtgaatgggagaaatggtggaagaacccgcaacaggtggagctgtacaacttc
atggcaaaagacaatgttccattccacagtgtggttttcccctgctctctgctcggggca
caggacaactacacactcgtcaaccatctcgtcgctacagaatatttgaactatgaggac
acaaagttctcaaagagccgtggtgtgggagtgtttggagacatggctaaagacacgggc
attccatctgatgtttggcggttctaccttacctacgtgagacctgagagccaagactct
tccttctcttgggctgacctggctctgaagaacaactccgagctgctcaataacctgggc
aattttatcaacagggcaggcatgtttgtgagtaagttctttaatagctgtgtgccggag
attgttctgcaggatgaagacaagcgtctcattgctcaggtgtcctgggagctcaagcag
tacatccagttgctggacaaagtcaggattcgcgatgccctgaagtgcattctcaacatc
tctcgtcacggcaaccagtatattcagaccagcgaaccctggaagaagattaaaggagga
gatgaggacaggaaacgtgcaggcacagtaactggtttgtctgtgaatgtggcgtgtctc
ctgtcggccatgttggagccgtacatgcccacagtcagtcagaccatccgtacccagctg
caagctccggataattgtgcctttgccatgctgggtgctgagggatgtttcctccgcagc
ctcccaaccggccaccaaatcggcacggtcagccctctgttccagaagctggagcctgag
caaattgagatcctgaggaagaaatttggaggacaacagccgggggaggagacccctacg
ggaaagggtcccagtgataagagcacagcggagaccaagcctcccactgccgcagcacct
actgctagtcaaggaaagaagtga
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