Ictalurus furcatus (blue catfish): 128614638
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Entry
128614638 CDS
T09387
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu00260
Glycine, serine and threonine metabolism
ifu00630
Glyoxylate and dicarboxylate metabolism
ifu00670
One carbon pool by folate
ifu01100
Metabolic pathways
ifu01200
Carbon metabolism
ifu01230
Biosynthesis of amino acids
ifu01240
Biosynthesis of cofactors
ifu04981
Folate transport and metabolism
Module
ifu_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
128614638 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
128614638 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
128614638 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
128614638 (shmt2)
Enzymes [BR:
ifu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
128614638 (shmt2)
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Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
128614638
NCBI-ProteinID:
XP_053492099
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Position
11:20199249..20239412
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AA seq
498 aa
AA seq
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MLTQPLRYLVRPLCQRVSVTLRGQHSAAARSPDHDRPWTGQDSLAQDDPEMWDLLRKEKD
RQCRGLELIASENFCSRAALEAQGSCLNNKYSEGYPGKRYYGGAEVVDQIELLCQKRALA
AFDLDPALWGVNVQPYSGSPANFAAYTAVLKPHERIMGLDLPDGGHLTHGYMSDVKRISA
TSIYFESMPYKLNPKTGLIDYDQMELTAKLFRPRLIIAGTSAYARLIDYARIKKLCTELN
AYLLADMAHISGLVAAKAVPSPFEHADLVTTTTHKSLRGARAGLIFYRKGVRSVDKKGAQ
VTYDLEDKVNFSVFPSLQGGPHNHAIAGVAVALRQATTPMFREYIAQVMKNAKAMAEALL
KKGYTLVSGGTDNHLVLVDLRPQGMDGARAERVLELVSITANKNTCPGDKSALTPGGLRL
GAPALTSRQFKEADFERVVDFLDEGFKIALDVKKKTKKLAEFKSFLLEDPETVARIGELR
SRVEAFARPFPMPGFSDH
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgttgacacagccactgagatatttagtccggcccctgtgccagcgtgtgagcgtgact
ctgagagggcaacactctgcagcagcgcggtcgcctgatcatgatcggccctggaccggg
caggacagcctggcacaggatgatcccgagatgtgggacctgttgcggaaagagaaggac
cgacagtgtcgtgggctggagctcattgcttcggagaacttctgcagccgagcagcactc
gaggcccagggctcctgcctcaataataagtactcagaaggctacccaggaaagaggtat
tatggcggtgcggaggtagtagatcagatcgagctgctgtgtcagaagcgcgctctggct
gcttttgatctggacccggcactctggggagttaacgttcagccgtactcgggctcgccg
gctaacttcgccgcctacacggccgtgctgaagccccacgagcgtatcatgggtctagac
ctacctgatggaggacaccttacacatggctacatgtctgatgtgaagcggatctctgct
acttccatctactttgagtctatgccctacaaactcaatcctaaaacaggtctgatagac
tacgaccagatggagctgactgcaaagctgtttcggccccggctgatcatcgctggcacc
agtgcttatgcccgcctcatcgactatgctcgcatcaagaagctgtgtacagagttaaat
gcgtacctgctggcagacatggcccacattagtggcctcgtggctgctaaagctgttccc
tctccatttgagcacgctgacctcgtcaccacaaccacgcacaaatccctcagaggtgcc
agagctgggctgatattctaccgtaaaggcgtgcgctctgtggataagaaaggtgctcag
gtgacgtatgaccttgaggacaaggtcaacttttcagtcttcccctctctccagggaggt
cctcacaatcatgctatcgctggggttgctgtggctctgcgacaggccaccactccaatg
tttagagaatatattgcacaggtgatgaagaacgctaaagccatggctgaagcattgctg
aaaaaaggatacacccttgtgtcaggtgggactgataatcacctggtgctggttgatttg
agaccacagggaatggatggagcacgtgctgaaagggttttggagctggtctccattaca
gccaataaaaacacctgccctggggacaagagcgcactcacacccggaggcctacgactg
ggtgctccagctctgacctctcggcagtttaaagaggcagacttcgagcgcgtcgtggac
ttcttggacgaaggcttcaaaatcgctctggacgtcaagaaaaagaccaagaaattagcg
gagtttaagagcttcctgctggaggatcctgagactgttgcacggatcggtgagctgcgc
agtcgggtggaggcattcgctcggcctttccccatgccaggcttctccgaccactaa
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