Ictalurus furcatus (blue catfish): 128614732
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Entry
128614732 CDS
T09387
Symbol
chd1l
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ifu03036
]
128614732 (chd1l)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
128614732 (chd1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
LIG3_BRCT
DEAD
AAA_22
Torsin
DUF6040
Motif
Other DBs
NCBI-GeneID:
128614732
NCBI-ProteinID:
XP_053492291
LinkDB
All DBs
Position
11:complement(2627356..2651033)
Genome browser
AA seq
1025 aa
AA seq
DB search
MSRFLQAVQSNISEKEKSELSVSELQKCGLTGIVLKPYQLDGVRWLSQCLKTLDGCILGD
EMGLGKTCQTISLLVYARGHLRMKGPFLVLCPLTVIEHWEKELKSLCPSLHVVHYKGDKT
KRAELQRNMEDQPFHILLTHYQICQNDASVLKRWNWDILVVDEAQRLKNENSKLHRILTE
FSLGFRLLLTGTPIQNNLQEVYSLLTFIQPDIFPPDATTEFVNAYADVQTQSSQAKELHR
VLQPFLLRRVKAEVETELPKKVELVVYHGMSAVQKKYYKAILMKDLDVFRSDQGINNRLL
NVLMQLRKCVNHPYLFNGVEPEPFEMGEHLVEASGKLSLLDSMLAHLLEEGHRVLLFSQM
TRMLDVVQDYLEYRGYSYERLDGSVRGEERHLSVNKFSTEEVFIFLLSTKAGGVGLNLTV
ADTVIFLDSDFNPQNDVQAAARAHRIGQKRPVKVIRLLGRDTVEEMIFSRAVSKLRLTNT
VIEEGQFSLLEKSKAASQLELSEILKFGVHKLLSSDESSVQRVDVLQVLGQSRDGKWLVD
EEHVRPAEEEEDEDEERQNHMYFFEGKDYSKIPSTEDEKRFELMLEEQSTPAEDAGKEGR
SLRHKAGVLFSGHLASTSRVKRPLTESELEERRRKREETAAKKAKQQEEKKREREEQKYK
KKMAWWASCGYTSLCLPSADSEGEDVDEEEEGDVSSVNSTDSDDTAIRYVLGDVTHPQAE
REDVIIVQCVDDSGRWGRGGLFTALELRSDEAKKQYELAGDMEDLELGSVLLFSIDDKQS
RLSGRDYLALIVAQRRDKTNQLSGIHLNALDEGLKKIYRAAKQKKASVHLPRIGHATKGF
NWYGTERLIRKHLASRGVPTFIYYYKRTSSDPTTTASSSTAAIPSTSRSAFAPPAPVSPS
SSCSLGPPEEQAESPEGSRASRQGGEASGLPDFMRGVCVLFYHVGATERKQLARYLIAYD
GDEEDLVSSHVTHIVAEVESPAHIQELQDMCQQCPQAILVKKNWLKSCFANQRKVSTSKY
IHHFK
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggtttctccaggcggttcagagtaatatatcggagaaagaaaagtcggaactg
tctgtgagtgagctgcagaaatgcggactaacaggaattgtgctgaagccgtaccagctg
gatggcgtgcggtggctctctcaatgtttgaagactctggacggctgcatcctgggggat
gaaatgggtttgggtaaaacctgtcagaccatctccttgctggtgtacgccagaggacat
ctccgcatgaagggtccctttctggtgctctgtcctctgacagttattgagcactgggaa
aaggagttgaagagtctgtgccccagtctgcacgtggtgcattataaaggtgataaaaca
aaaagagctgagctgcagagaaacatggaggaccaacctttccacatcctgctgactcac
taccagatttgccagaatgacgcgtcggtattaaaaaggtggaactgggatattttggtt
gtggacgaggctcagcgactgaagaacgaaaactcgaagcttcaccgaatccttacagag
ttctctttaggcttcagacttttgctaaccggaacgcccatccagaataacctgcaggag
gtctactcgctcctgaccttcatccagcctgatattttcccacctgacgctacaaccgag
tttgtgaacgcgtatgcggatgtacagactcaaagctcacaagctaaggagctccatcgg
gttctccagcccttcttgctccgcagggtgaaggccgaggtggagacagaactgccgaag
aaagtagagttggtggtttatcacgggatgtctgctgtccaaaagaagtactacaaagcc
attctgatgaaggacctggatgtgtttaggagcgatcagggcattaacaaccggctcctg
aatgttctgatgcagctgaggaagtgtgtgaaccacccctacctgttcaacggtgtggag
cccgagccgtttgagatgggtgaacacttggtggaggcgagcgggaagctctctctgctc
gactctatgcttgcccacctgttggaggagggtcaccgggttctgctgttctctcaaatg
accaggatgttggacgttgtgcaggattacctggagtacagaggttacagctatgagcgt
ctggatggctcggtgcgaggagaagagcgccatctctctgtcaataaattcagcaccgaa
gaggtcttcatcttcctgctcagcacaaaagctggaggggtcggtttgaacctgacggta
gccgacactgtaatcttcttggacagcgattttaatccacagaacgacgtgcaagcggcg
gctcgagctcaccggatcggccagaaaaggcctgtgaaagtgatccggctgctggggagg
gacacggtggaggagatgatcttctcccgcgccgtgtccaaactgcgtctcaccaacacc
gtgatcgaggagggacagttctctctgctggagaagagtaaggctgcttctcaactcgag
ttgagcgagatcctgaagtttggagtccacaaactgctgtcgtcagatgagagctcagtc
cagcgtgtggacgttctgcaggtcctgggacagtcccgagatggcaagtggctggtggac
gaggagcacgtcaggcctgctgaggaagaggaggatgaagacgaggagagacagaatcac
atgtacttctttgaggggaaggactactccaaaatcccgagcacggaggacgagaaaagg
ttcgagctcatgctggaggagcagtcaactcccgcggaggacgccgggaaagaaggacgc
agcctacgccacaaagccggagttttattctctggacatttagcatcgacttcgagagtg
aagaggcctctgacggagtctgagctggaagagaggcgtcggaagagagaggaaactgct
gctaaaaaagccaagcagcaggaagagaagaagagagagcgcgaggagcaaaaatacaag
aagaagatggcgtggtgggcatcatgtgggtatacatcgctgtgcctgccctctgctgat
agtgaaggcgaggatgtggacgaagaagaagaaggagacgtcagcagtgtgaactctacc
gactcggatgacacggcgattcgttacgtactcggtgatgtcacacaccctcaggctgag
cgcgaggacgtcattatcgttcagtgtgtggacgattctggacggtgggggcgaggcggc
ttgttcacagctctggagctccggtcagatgaggcgaagaaacagtatgaactggcagga
gacatggaagatttggagctcgggagcgtgctgctgttctccattgacgacaaacagtcg
agactgagcggacgagactacttggctctgatcgtcgcccagaggagagataaaaccaac
cagctgtcagggattcacctcaatgccctggacgaggggctcaagaagatctacagagct
gccaagcagaagaaagcgagtgtccaccttccacgaattggacacgccaccaaaggcttc
aactggtacggcactgagaggctgatacgcaagcacttagcctcccgaggagttcctacc
ttcatatactactacaagcgtacatcctctgaccccaccacgactgcttcgtcttcgacc
gcggcgatcccgtccacctcgcgctcggcgttcgctcctccagcaccggtctctcccagc
tcctcgtgttctctcggtcctccggaagagcaagccgagtctccagaaggttctcgtgca
tcgcggcagggtggagaagcttccggtttacccgactttatgagaggagtctgcgtgttg
ttctaccacgtgggggcgacggagagaaagcaactcgcacgctacctcatcgcatacgat
ggcgatgaagaggacctcgtgagctcacacgttactcacattgtagcagaggtagaaagt
ccagctcatatacaggaattgcaggatatgtgtcagcagtgccctcaggccatccttgta
aagaagaactggctcaagtcttgctttgccaaccagagaaaagtcagcacttccaagtat
atccatcattttaaataa
DBGET
integrated database retrieval system
