Ictalurus furcatus (blue catfish): 128614814
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Entry
128614814 CDS
T09387
Symbol
scn8ab
Name
(RefSeq) sodium channel, voltage gated, type VIII, alpha subunit b
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ifu04040
]
128614814 (scn8ab)
Ion channels [BR:
ifu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
128614814 (scn8ab)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ
ATP-synt_B
GPHH
SieB
Motif
Other DBs
NCBI-GeneID:
128614814
NCBI-ProteinID:
XP_053492411
LinkDB
All DBs
Position
11:complement(390436..487242)
Genome browser
AA seq
1977 aa
AA seq
DB search
MAAPLLAPPGPDSFKKFTRESLANIEKRIAEEKKKKPVKPRSDSSHRDDDDDNGPKPNSD
LEAGKSLPFIYGDVPSNMVAVPLEDLDPFYLNKKTFIVLNKGKTIFRFSATPSLYIISPF
NLFRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPEWSKQVEYTFTGIYTFESLTKIV
ARGFCIDGFTFLRDPWNWLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLK
TIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVFWPISNETITYLSNGS
RGFDFNEYIMNDTNFYFLPDQGDALLCGNSSDSGRCPEGYTCMKAGRNPNYGYTSFDSFG
WAFLALFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQ
NQATIEEAQQKEEEFKAMLEQLKKQQEEAQANAMATSAGTVSEDAVEDDGGGHLSRSSSE
VSKLSSKSAKERRNRKKKWRKEQEKEKGDSEKVVKSESDDGSKRSRFRFPDNRLGRKTSI
MNQSLLSIPGSPFMSRHNSRSSIFSFKARPRDVGSENEFADDEHSTVEESEDRRGSLFIP
YRRNSYSGYSQGSSRINPLAPHSGCKRNSTVDCNGVVSLIGPGRLLPEVKIDKAASDDST
TEVDMKGKHSGSLMVSVDQLNTSFGRKERANSVMTVITNTLVEELEESQRKCPPCWYKFA
NRFLIWQCCPLWLKIKEIVNLIVFDPFVDLAITICIVLNTVFMAMEHYPMSPEFEAVLYV
GNLVFTAIFTAEMVAKLVAMDPYYYFQESWNIFDGFIVSLSLVELMLADVQGLSLLRSFR
LLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCK
IASDCDLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMCLTVFMMVMVIGNLV
VLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKTGIAWTKVHVRLLVAHILKKSP
LEDEDKPLDDMYDKKLNIIGNHTGVDIKCGELDFVKNGNGTTSGIGSSVGKYMIDEDRMS
FIHNPNLTVRVPIAVGESDFENLNTEDFSSESDVENSKDLDTSSSEGSTIDIKPEEEEAG
VVEVVEEYLDPEACWTDACVARYKCCDVPITEGWGKHWWYLRKTCYLIVEHNWFETLIIF
MILLSSGALAFEDVYIEQRKTIQIILEYADRVFTYIFILEMLLKWVAYGFVKYFTNAWCW
LDFFIVDVSIVSLIANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPS
IMNVLLVCLIFWLIFSIMGVNLFAGKYYYCFNETSKEYFEPDDVNNKTECEALMSSNHND
VRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSREVEDQPKYEDNLYMYIYFVI
FIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPR
PQNQIQGMVFDFVTQQAFDISIMILICLNMVTMMVETDDQSEETENILYWVNFVFIVVFT
GEFVLKLFALRHYYFTNGWNIFDCVVVILSIVGMFLADLIEKYFVSPTLFRVIRLARIGR
ILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKRELGIDDMY
NFETFGNSMIILFMITTSAGWDGLLAPILNYPPDCNPDKENPGTTVKGDCGNPSVGIFFF
VMYIIVSFLIVVNMYIAIILENFSVATEESADPLCEDDFESFYEIWEKFDPDASQFITFA
KLPDFADTLEHPLRVPKPNIIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGDLDMMR
QQMEERFVAANPSKVSYEPITSTLRRKQEEVSAVVIQRAYRAHLTRRGFVCKRRPANNKL
ENGGTNQEKKEDTPSTASLPSYDSVTKPEKEKQDDDNEGKGRKEKGRNQKDVRESKC
NT seq
5934 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgccgctgctcgcacccccaggccctgacagcttcaagaagttcacccgggag
agtttggccaacatcgagaagcgcattgctgaggaaaagaagaagaaacccgtcaaaccc
cgatccgacagcagtcatcgtgatgacgacgacgacaacgggcccaagcccaactccgac
ctggaggcggggaagagcctgcccttcatctacggggacgtcccctccaatatggtggcc
gtgcctctggaggacttggaccccttctatttgaacaagaaaacctttatagtgctaaac
aaagggaaaacgatcttccgcttcagtgccacgccctcgttgtatatcattagccctttt
aatctgttcaggcgaatagctattaaaatattgatacattcagttttcagcatgatcata
atgtgcaccattttaaccaactgtgtgttcatgacattcagcaacccgccagaatggtcc
aaacaagtcgagtacacattcacagggatttacacgttcgagtctctcacaaagatcgtg
gctcgaggattttgtatagacggcttcacgtttctcagagatccctggaactggctggac
tttatggtcatctccatggcatatgtaacagagtttgtggacctcgggaatgtgtccgcc
ctgagaaccttcagggttctacgagctctcaaaactatttctgtcataccagggctgaaa
accatcgtgggcgctctgatccagtcggtgaagaagctgtctgatgtgatgatcctgacg
gtgttttgtctcagcgtgtttgcgctcatcggcctgcagctcttcatggggaacctgcgg
cagaagtgtgtgttctggccaatcagcaacgagaccatcacgtacctgtccaatgggagc
agaggattcgactttaatgagtacatcatgaatgatacaaatttctacttcctgccagac
cagggagatgctttactgtgtggaaacagctcagattctggacgctgtccggagggttac
acgtgcatgaaggcaggccgtaaccctaactacgggtacaccagctttgactcattcggc
tgggcgttcctcgctctcttcagactcatgacacaggacttctgggagaatctgtaccag
ctgacccttcgagctgcaggaaaaacctacatgatcttcttcgtgctggtgatctttgtg
ggttccttctacctggtgaatctgatcctggctgtggtggccatggcctatgaggagcag
aaccaggccactattgaagaggcccagcagaaagaggaggagtttaaagccatgttggag
cagctcaagaaacagcaggaggaggctcaggccaacgcaatggccacgtctgcagggaca
gtatctgaggatgctgtggaggacgacggaggcggacatctctcccgcagctcctctgag
gtgtccaagctgagctccaaaagtgccaaggagcgacggaacaggaagaaaaagtggagg
aaagagcaggagaaggagaagggagacagcgagaaagtggtcaaatctgagtcggatgac
ggcagcaagaggagtcgcttccgtttcccagacaaccgtctgggcagaaagacctccatc
atgaaccagtctctgttaagtatacctggctcgcccttcatgtcccgccataacagtcgc
agctccatcttcagctttaaggcgcgtccgcgggacgtcggctcagagaacgagtttgcg
gatgacgagcacagcacggtggaagagagcgaagaccggcgaggctccctcttcatcccg
taccggcgcaacagctacagcggttacagtcagggctcatcacgcatcaacccactggcg
ccacactcaggctgcaagaggaacagcacggtcgactgcaacggcgtggtgtctctgatc
gggcccggtcgccttctgcctgaggtgaaaatagataaggcagcctctgatgacagtacg
actgaggtggacatgaaggggaaacactccgggtctctcatggtgtccgtggaccagctg
aacacgtcgtttgggcgtaaagagcgagcgaacagcgtgatgaccgtcatcactaacaca
ctagtggaggagctcgaggagtctcagcggaagtgtcctccatgctggtacaagttcgcc
aacaggtttctgatctggcaatgctgtccactctggttgaaaattaaggagatagtcaat
ctgatagtgttcgacccgtttgtggatttggccattactatatgtatcgtactcaacacc
gtgttcatggcgatggagcactaccccatgagcccagagtttgaggcggttctgtatgta
ggaaatctggtgttcactgccattttcacagccgagatggtcgcgaagctcgtagcgatg
gacccgtattactacttccaggagagctggaacatattcgatggcttcatcgtgagcctg
agtttggtggagttgatgctcgctgatgttcagggattgtcgctgctgagatccttcaga
ttgctgagggttttcaaactggcaaagtcgtggcccactctgaacatgctgatcaagatc
atcgggaactctgtgggcgctctgggaaacctgaccctggtgctggccatcatcgtcttc
atcttcgccgtggtgggcatgcaactgtttgggaagagctacaaggactgtgtgtgtaaa
attgcctcagattgtgacctgccgcgctggcacatgcacgacttcttccactcgttcctg
attgtgttccgcgtgctgtgtggagaatggatcgagaccatgtgggactgcatggaggtg
gcaggacagaccatgtgcctcaccgtttttatgatggtcatggtcattggaaacttagtg
gtgctgaatctgttcctggctctgctgctcagctcgttcagcgctgataatttggctgcc
actgatgacgacggggagatgaacaacttgcagatctccgtgatccggattaaaacgggc
attgcctggaccaaagtccatgtgcggctgctggtggctcacatcctgaagaagtcgcct
ctggaggatgaagacaagcctttggatgacatgtacgacaagaaactgaacatcattggc
aaccatacaggagtggacatcaaatgtggtgagctcgacttcgtcaagaatggcaacggc
accaccagcggcatcggtagcagtgtggggaagtacatgatcgacgaggaccgcatgtcc
ttcatccacaatcccaacctgactgtgcgtgtcccgatcgccgtcggagagtcggacttc
gagaacctgaacacggaggacttcagcagcgaatcggatgtggagaacagcaaggacctt
gatacgagctcgtcggagggcagcactatagacataaagccggaggaggaggaagcaggg
gtggtggaggtggtggaggagtatctggacccggaagcgtgctggacggacgcctgtgtg
gcacggtataagtgctgtgatgtgcccatcactgagggttgggggaaacactggtggtac
ctgaggaaaacctgctacctcattgtagaacacaactggttcgagacactcatcatcttc
atgatcctgctcagctctggagctctggcatttgaggacgtgtatatagaacagaggaaa
acgattcagatcattctggaatacgcagatcgagtcttcacctacatcttcatcttggaa
atgctgctcaaatgggttgcttatggattcgtcaaatatttcactaatgcatggtgctgg
ctcgacttcttcatcgtagacgtgtctatagtcagccttatagctaatgcgctggggtac
tcagacttgggccccattaagtccctgaggactttgcgggccctcaggcccctgagagct
ttgtcccggtttgagggaatgagggtcgtggtgaatgcgctggtgggtgccatcccatcc
atcatgaacgtgctgttggtgtgtttgatcttctggctcatcttcagcattatgggggtg
aacctgttcgctggaaagtactactactgctttaacgagacaagcaaggagtatttcgag
cccgatgatgtcaacaacaagacggagtgtgaagcgctcatgtcttcaaatcacaatgac
gttcgctggaaaaacgtcaagatcaactttgataacgtgggtgctggatatctggcactc
ttacaagtggccacgtttaaaggttggatggacatcatgtacgcagcggtggattccaga
gaggttgaagatcaaccgaagtatgaagataatctctacatgtacatctatttcgtcatc
ttcatcatcttcggctcattcttcacactgaatctgtttattggtgtcatcatcgacaac
ttcaaccagcagaagaaaaagtttggaggtcaggatatcttcatgacagaagaacagaag
aagtactataatgccatgaagaaactgggctcgaagaaaccgcagaagcccatccccaga
ccacagaaccaaatccaggggatggtgtttgacttcgtcacgcagcaggccttcgacatc
tccatcatgatactcatctgtctcaacatggtcacgatgatggtggaaacagatgaccag
tcggaagagacagagaacattctgtactgggtcaacttcgtcttcatcgtggttttcact
ggcgagtttgtactgaagctctttgcactacgacattactacttcaccaacggctggaac
atctttgactgtgtggtggtgattctgtctattgtgggtatgttcctggcagacctgatc
gagaagtactttgtgtcacctactctgttcagggtgatccgtctggctcgaattggtcgt
atcctgcgtttaatcaaaggagccaagggtatccggaccttactgtttgccttaatgatg
tcacttcctgccctgtttaacatcggcctgttgcttttcttggtcatgttcatcttctcc
atattcggtatgtccaactttgcgtacgtgaagcgggagctcggcatcgacgacatgtac
aactttgagacgttcggtaacagcatgatcatcttgttcatgatcaccacttcggcaggg
tgggacggtttgctcgcgcccatcctcaactacccacctgattgcaaccctgacaaggag
aacccaggaaccacagtgaagggggactgtggcaacccttctgtaggaatcttcttcttt
gtcatgtacatcatcgtgtccttcctgattgttgtaaacatgtacattgccattattctg
gagaactttagcgttgcgacagaggagagcgctgatccgttgtgtgaggatgactttgag
tccttctacgagatctgggagaagtttgacccagacgcatcacagtttattacctttgcc
aagctgccggactttgcagatacgctggaacatcctctacgtgtgcctaagcctaatata
atcgagcttattgcaatggatctacccatggtgagtggtgatcgtatccactgcttggac
atcctgtttgcttttaccaagcgcgtcctgggcgacagcggtgacctggacatgatgcgt
cagcagatggaggagcgctttgtggcggcgaacccttccaaagtgtcctacgagcctatc
acctccacgctacgccgtaaacaggaagaggtgtcggccgtggtgatccagagggcgtac
cgcgcccacctcacccgccgggggttcgtctgcaaacgccggccggccaacaacaagctg
gaaaacggagggacaaatcaggagaagaaggaggacaccccctctaccgcatcgctgccg
tcgtacgacagcgtaaccaagcccgagaaggagaagcaagatgacgacaacgagggaaag
ggccgtaaggagaagggccgaaaccaaaaagacgtcagggaatccaagtgttaa
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