Ictalurus furcatus (blue catfish): 128614888
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Entry
128614888 CDS
T09387
Symbol
ccdc174
Name
(RefSeq) coiled-coil domain-containing protein 174
KO
K25178
coiled-coil domain-containing protein 174
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128614888 (ccdc174)
03041 Spliceosome [BR:
ifu03041
]
128614888 (ccdc174)
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
128614888 (ccdc174)
Spliceosome [BR:
ifu03041
]
Complex C
Other components
EJC/TREX
128614888 (ccdc174)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
128614888
NCBI-ProteinID:
XP_053492550
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All DBs
Position
11:3165389..3169400
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AA seq
474 aa
AA seq
DB search
MDKKKKQYNVTASSLVDLKAELYRKQEAFKQDKLAQDAGTASKSHNHTKKPSVWSKQNQG
VTARAQKDVEKTAEEEQSLDRSRQKLEEKARLYEQMTKGDFPDEETESLYLVDFTQKIIE
QKRAAQSREDEAGDRDGEGSETRVPVPPPQSADEEWVDYVDALGRSRKCLRKDLHQFQKM
DQDLHSKRVVGADRTLLSEDMRREMQREQWEREEEEQMKRPVGPVHYEDIRDGEARDLGV
GYYAFSQEEDQRKKQRETLDMLRDQTAEQRTKREHLKERRKALLEARLAKVRMRKTKKSK
MDPGAEDEEEAPVPDGAVKEGEDDPEDVIGPPPAPEAAAKKVEVEIQERKDSRPGVPHVR
EWDRGKEFTWGQWTTQRRDERDSDFAPPSSYFLDERRAGRGRSTQEARGKGKPGFKRSEA
HGGWDQDGTERRAQNTHASFTDQSSFSQPQQTSQAHSAQTHDLDALLSFYKNSV
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggataagaagaaaaaacaatataatgtcacagcttcatcgctggttgatttgaaagca
gagctttataggaaacaggaggcgttcaagcaggacaaacttgctcaggatgcagggact
gcatccaaatcacacaaccatacaaagaaacccagtgtatggagtaaacagaaccaagga
gtgactgcacgtgctcagaaggatgtggagaaaacggcagaggaggaacaaagcctggac
agatcgaggcagaagctggaggagaaagcacgcctctatgagcagatgactaaaggggat
tttccagacgaggagacggagagtctgtacctggtggatttcacacagaagataatcgag
cagaagagagcagcacagagcagagaggatgaagcaggagacagagatggagaaggatcg
gagacgcgcgtccccgtccctcccccacagagtgctgacgaggaatgggtggactatgtt
gatgcgctgggtcgatcaagaaagtgtttaagaaaagatttacatcagtttcagaaaatg
gaccaagatttacacagcaagcgagtggtcggagctgataggacgctgttgtctgaagac
atgaggcgagagatgcagagagagcagtgggagcgggaggaagaagagcagatgaagaga
cccgtaggacccgttcactatgaagacatccgagatggagaggccagagatctgggtgtt
gggtattacgctttttctcaagaggaagaccagcgcaagaagcaaagggaaactctggat
atgctgagagaccagaccgctgagcaacgcaccaagcgagagcatctgaaggagagacgg
aaagctctgctcgaggctcgactggctaaagtgagaatgaggaagacgaagaaaagcaag
atggatcccggagccgaggacgaggaagaagctcctgtgcctgatggagcggttaaagaa
ggcgaggacgatcccgaggatgtgatcggacctccacctgctcctgaagctgccgccaaa
aaggtggaggttgaaattcaggagagaaaagactcgagaccgggagtgccgcatgtgaga
gagtgggacagaggaaaagagttcacatggggtcagtggacgactcagagacgggacgag
agggattcggattttgccccgccctcgtcttacttcctggatgagagacgagccggtcga
ggcaggtcgacgcaggaagcgcggggcaaagggaaacccggtttcaaacggtctgaggcg
cacgggggatgggatcaggatggcacggaaagacgagctcaaaacacgcacgcatctttt
acagaccagagctcgttctcacagcctcagcaaacgtcacaagcacattcggcacagaca
cacgatctggacgcccttttatccttctataaaaactctgtttga
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