Ictalurus furcatus (blue catfish): 128615019
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Entry
128615019 CDS
T09387
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ifu04040
]
128615019 (trpc1)
Ion channels [BR:
ifu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128615019 (trpc1)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
TALPID3
Motif
Other DBs
NCBI-GeneID:
128615019
NCBI-ProteinID:
XP_053492812
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Position
1:34735135..34771533
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AA seq
784 aa
AA seq
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MAALYRGPHTASPRAHLALKDVREVQEETTLDEKLFLLACEKGDYYMVKKLLEEKRHGEL
NINCVDVLGRDAITIAIENENLEILQLLLENGCQTTDALLVAIDSEVVGAVDILLNHRPR
RSSKPSIAKLMQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDISLPRPHAVGCEC
TLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFELSADLKELSLVEVEFR
TDYEELAKQCKMFAKDLLAQARNSRELEVILNHTSNEDHVNKRGLMEERMNLSRLKLAIR
YNQKEFVAQSNCQQFLNTVWFGDMASYRRKHTGLKLLMVLSVVLLWPLLSVCYLLGPRSR
VGHIIHTPFVKFIIHSASYLTFLLLLNLYSLVYNKDTKDTVGPALELIDYLLILWIIGMV
WSDVKRLWYEGLEDFLEESRNHLSFVMNSLYLATFALKVVAHSKFKNGNVDRKDWDASHP
ILVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQEFGKFLGLFLLVLFSFTIG
LTQLYGKDQKDPSKSKNDSKDCEGIFCEQQSNDAFHTFMGTCYALFWYIFSLAHVALFVT
RISYTEELRSFVGALIIGTYNIVVVIVLTKLLVAMLHKSFRQIANHEDKEWKFARAKLWL
SYFDDKCTLPPPFNILPSPKTLCYLVTSVSKWVCSHTSTGKMKRQNSLKEWKNLKQKRDE
NYQKIMCCLVHRYLTSTRQKMQSTDQATVENLNDLRQDLSKFRNEMRDLLGFRTSKYAMF
YPRS
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgctgtaccggggcccgcacaccgcctctccccgcgcccacctggcgctcaag
gacgtccgggaggttcaggaggaaaccacgctggatgagaagctcttcttgttggcctgt
gagaagggtgattactacatggtgaagaagcttctggaggaaaaacggcacggcgagctg
aatatcaactgcgtggacgtgttggggagggacgccatcaccatcgccatcgagaacgag
aacctggaaatcctgcagctgctcctggaaaacggctgccagacgacagatgctcttttg
gtggccatcgactcggaagtggtgggagctgtcgatattcttctcaaccaccggcccaga
cgatcctccaaaccctcgattgcgaaactgatgcagcggatccagaacccggaatattcc
accaccatggacgtggcccccgtcatcctggctgctcacaggaacaactacgagatcctg
accatgcttctgaagcaggacatctcacttcccagacctcacgccgtgggctgcgagtgc
actctctgcaacgccaagaacaagaaggacagcctgcgtcactccaggtttcggctggac
atctatcgctgcctggcgagtccgtcgctcatcatgctgacggaggaggaccctattctc
agagcgttcgagctcagcgctgacctcaaggagctcagcctggtcgaggtggagttcagg
actgattatgaagaactagccaagcagtgcaagatgttcgctaaagacctgttagcccag
gcgcgaaactcacgtgagcttgaagtcatcctgaaccacacgagcaacgaggatcacgtg
aataagagaggactaatggaggagcgcatgaacctcagccgactcaaactcgccatcaga
tacaaccagaaagagttcgtggcgcagtctaactgtcagcagttcctgaacacggtgtgg
ttcggtgacatggcgagctaccggcgtaaacacacgggtctgaagctgctgatggtgctg
agcgtggttctgctgtggccgctgctctcggtgtgctacctgctcggaccgcgctcgcgc
gtcggacacatcatccacacgcccttcgtgaagttcatcatccacagcgcctcttacctc
accttcctcctcctgctcaacctctactcgctggtctacaacaaggacaccaaggacacc
gtgggcccggcgctggagttgatcgactacctgctcatcctctggatcataggaatggtg
tggtcagatgtaaagcgtctgtggtacgagggcctggaggacttcctggaggagtcgagg
aaccatctgagttttgtcatgaactctctgtacctggccacctttgcgcttaaagttgtg
gctcacagcaagtttaagaacgggaatgttgaccggaaagactgggacgcctctcacccc
atcctggtggccgagggacttttcgccttcgctaacgtgctgagctacctgcgtctcttc
ttcatgtacaccaccagctccatcctcggccctctacagatctcgatgggtcagatgctg
caggagtttggaaagttcttaggcctgttcctgctggtgctcttctccttcaccatcggc
ctgacgcagctttacggaaaagaccagaaggatccgtccaagagcaaaaacgacagcaag
gactgcgaaggaatcttctgtgaacagcagagcaatgacgcctttcacacgtttatgggg
acgtgttatgcactcttctggtacatcttctctcttgcccacgtggcgctgttcgtgacc
aggatcagctacacggaggaactgcgctcgttcgtgggcgccctcatcatcggcacgtac
aacatcgtcgtcgtgatcgttctcaccaagcttctagtggccatgctgcataagagcttc
agacagatcgctaaccatgaggataaagaatggaaatttgcccgggccaagctctggctc
agctactttgatgataaatgcacattgcctccaccgtttaacatccttccatctccgaag
acgttgtgctacttagtgaccagcgtgagcaagtgggtctgttcccatacatccactgga
aagatgaagagacagaacagcctcaaggagtggaagaacctgaagcagaaacgggacgag
aactaccagaagatcatgtgctgcctggtgcatcgttacctgacgtccacacggcagaag
atgcagagcacggaccaggccacggtggagaacctcaacgacctgcggcaggacctgtcc
aagttccgcaacgagatgagagacctgctcggctttcgcacatccaaatacgccatgttc
taccctagaagctaa
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