Ictalurus furcatus (blue catfish): 128615050
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Entry
128615050 CDS
T09387
Symbol
prpf38a
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128615050 (prpf38a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ifu03041
]
128615050 (prpf38a)
Spliceosome [BR:
ifu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
128615050 (prpf38a)
Complex C
U4/U6.U5 tri-SnRNP related factors
128615050 (prpf38a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
128615050
NCBI-ProteinID:
XP_053492851
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All DBs
Position
11:7381457..7390849
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AA seq
311 aa
AA seq
DB search
MANRTVKDANSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKFIGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGAMYMRLTGTSVDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHGERVCDIILPRLQKRQVLEEAELLDTR
ISALEEDLDEVESSEEEEEEEEEKPERVQAPEPHRRSYRDLDRPRRSPSPRYKRSRSPRR
RSRSPKRRSPSPRRERERDRHRSKSPRRHRSRSRDRRHRSKSPGHHRSHRHRSHSKSPES
RSKKSHKSKRK
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacagaacagttaaagatgccaacagcatacacggaactaatccgcaatatctg
gtggagaaaatcattcggacgcgaatctacgagtctaaatactggaaagaagaatgtttc
gggcttacagccgagctggtcgtggacaaagcgatggagctgaaattcatcggcggtgtg
tacggaggcaacatcaaacccacccccttcttatgtctcaccctgaagatgctccagatt
cagccagaaaaagacatcattgtagaattcatcaagaacgaagatttcaaatatgtccgc
ctgcttggagccatgtatatgcgcttgaccggcacctcagtggactgctataagtatctg
gaaccactctacaacgattacagaaagattaaaagccagaacagaaatggagagtttgaa
ctgatgcacgtggacgagttcatagacgagctgcttcatggcgagcgcgtgtgtgacatc
atcctcccgaggcttcagaagaggcaggttctggaggaggctgagctgctcgatacacgt
atcagtgccctggaagaagacctggatgaggtggagtccagtgaagaagaagaggaggag
gaggaagagaagccggagcgagtacaggcgccagagccacacagacgcagttacagagat
ttggatagaccacgcagatctccatctcctcgctacaaacgaagccgctcgcccagaaga
cgaagcagatcaccgaagagacgaagtccttctcccagacgtgagcgagagcgcgatcgt
caccgcagtaagagtccacgcagacaccgcagcagatccagagacaggaggcaccgctcc
aaatctccaggtcatcacaggagccacaggcaccgcagtcactcaaaatcaccagagagt
cgctcgaagaagagtcacaagtcgaagaggaaatga
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integrated database retrieval system
