Ictalurus furcatus (blue catfish): 128615193
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Entry
128615193 CDS
T09387
Symbol
ift140
Name
(RefSeq) intraflagellar transport protein 140 homolog isoform X1
KO
K19672
intraflagellar transport protein 140
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ifu03037
]
128615193 (ift140)
Cilium and associated proteins [BR:
ifu03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
128615193 (ift140)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_WDHD1_1st
Beta-prop_WDR19_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_HPS5
TPR_GEMI5
WD40_Prp19
TPR_COPA_B
WDR55
Beta-prop_WDR90_POC16_2nd
Clathrin
Beta-prop_EML
Beta-prop_CAF1B_HIR1
tRNA_int_end_N2
TPR_IFT80_172
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_2nd
Consortin_N
Motif
Other DBs
NCBI-GeneID:
128615193
NCBI-ProteinID:
XP_053493048
LinkDB
All DBs
Position
1:37662998..37723852
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AA seq
1473 aa
AA seq
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MAVYFDHRIDAPESHGETTLITWHSTQPLLAVGSFNPASGGCVDIYLQQGERVELCHVER
VCAPVLLRWHPSKPVLAVGWEMGETLLLTHPHGEHTPLPNNTHTARITLLEWSCSGARMV
TGDQAGVLVVWKLDARGRLNGTHMTRQTYNKPLTTCIFRPTPPTEDVTVLAKAAVSGDEE
ALDKFNWKKNGKGGGVWSPGSQEGLIIYVSTAEGCVYSVDEHGRSVHLLTVEGRVQKLCY
LECRAVLAVVTDSLLLSQFRLGPEGGAQELSKVKLSGRGGQSSDIMWTESGLLITASGDQ
VIRLWDLERDDNYVLSLDENLGFEKGELLNCVAFCTAKAVLAAGTSRGRVAMWQMVTLTN
QKGDTKTQWRLQTPTELEGNITQLQWGSSLQLLAVLNSSAVFILSEHVMSSHYSQQGAAV
QLSPTQLSLTCFTSNTHLTLRTDTHIRAVQVTKDTVTVWDGRCVTVYEKSGQSLRSTASF
QCDSAALAVHEENIYTVEPNRVQVRTQQGTVKQLLVFTEAEGNPVMLSVCGSYLAVGTDT
AHVRVFNLSRREAKPLCNAKNMAELIPDLGALKSVKCNANGSQLSILITQVNGRPAHRVY
FYDVEMDTLSHFDFFTGRPLSSLSQSDDNQRAQRKEVELAGRYPISQFWDETEPRLFVCE
TVLVNSEYHIANQSHSTDMVDVLVVTFFVTQEHGLLRQDSQPRPAALQGLLALDTPYYYY
TCKLLFRRGGVFLPHPGELDTTSPAPAALPSSAQMVVRRALRDFVGLESCEKQTRDAMLN
FSFYLTIGDMDEAFRAIKLIKSEAVWENMARMCVKTCRLDVARVCLGNMGNARAARALRE
AEKEPELEARVAVLATQLGMLDEAEALYRSCGRFDLLNKFYQARGDWQTAIETAESHDRI
HLRSTYYSYAQHLENTGDKNLGLTYYERSDTHRFEVPRMLMEDSVSLELYINKMKDKCLY
KWWGHYLESQSEMESALRYYDYAQDYLSQVRVHCYLGNIQKASEIANETGNRAASYHVAR
QYESQDQISQSVHFYTRAQAYNNAIRLCKENHMDEQLMNLALLSNAEDMMDTAAYYEERG
EHMDRAVMLYHKAGRVSKALELAFSTEQFGALQLIAEELNENSDPAVLTRCSDFFIKHTH
YHKAVQLLVAAKKYHEALQLCLDQNLTITEDLAESMTVSQSSAHLSEEERKELLERIADC
CMRQGNYHLATKKYTQAGKKIKAMRALLKSGDTEKIVFFAGVSRQKEIYVMAGNYLQSLD
WRKDPEIMKNIISFYTKGRALELLAGFYQACAQVEIDDYQDYEKAYGALTESYKCLSKAK
SRHGDETDERLAQLTHHLTLIKRFIQARRLYEQDPAAALSECECLLEECDLDPAVRVGDV
FGFIIEHHCQHASYQKAWMKLEELRRLHPSVNVSVYISARSLDALQNAIGVRLNHGDTTH
TNTHHRDMDNTNTCTHSDGEDEDEVEEDENLND
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgtattttgatcaccgtattgatgcaccggagagtcacggcgagacgactctt
atcacgtggcactctactcagcccttattggctgtcggctcctttaatcccgcctccgga
ggctgtgtagacatttacttgcaacagggcgagcgtgtggagctgtgtcatgtggagcgt
gtgtgtgcgccggtgctgttgcgttggcatcccagtaaaccggtgctggctgtgggctgg
gagatgggagaaaccctgctgctcacacacccacacggagaacacacacccctgcccaac
aacacacacaccgcccgcatcacactgctggagtggagctgcagcggagccagaatggtc
acaggggatcaggcaggggtgctggtcgtgtggaagttggatgctcgagggagactgaac
ggaactcacatgacgagacagacctacaacaaacccttaaccacctgtatcttcagaccc
acaccacccacagaggatgttacagtgttggcaaaagcagcagtcagtggcgatgaagag
gctctggataaatttaattggaagaaaaatggtaaagggggcggagtttggtctcctggc
tcacaagaaggactcatcatctacgttagcactgctgaagggtgtgtgtacagcgtggat
gagcatggccgtagtgtacacttgctgactgtagagggcagagtacagaaactgtgttat
ttggagtgcagggctgtactcgccgttgtcacagactccctgctcctatcacagttccgc
cttggtccagaaggaggcgctcaggagctcagcaaggtgaagctgagtggtagaggagga
cagagctcagacatcatgtggacggagagcggcctgctaatcacagcatcaggagatcag
gtcatcaggttgtgggatctggagagagatgataactatgtcctgtctctggatgagaac
ctgggctttgagaaaggagagctgctcaactgtgtggccttctgcactgctaaagcggtc
cttgcagcaggcaccagcagggggcgtgtcgcgatgtggcagatggtgacactgaccaat
cagaaaggagacacaaaaactcagtggaggttacagacacctactgaactggagggaaac
attacacagctgcagtggggctccagtctgcagctcctggcggttttaaacagcagtgca
gtgttcattctgagtgaacatgtgatgagttctcactacagccagcagggggcagcagtg
cagctctcacccacacagctcagcctgacctgcttcacctccaacacacacctcacactg
cgcaccgacacacacatcagagctgtgcaggtcaccaaggacacagtgactgtatgggat
gggaggtgtgtaacagtgtatgagaaatcaggacaatccctacggagcacagcttctttt
cagtgtgactctgctgctctggcggttcatgaagagaatatttatactgtagagccgaac
cgagttcaggtccgcacacagcagggcactgtaaagcagctgctggtgtttacagaggca
gaggggaaccctgtcatgctgagtgtgtgtggatcatacctggctgttgggactgacacc
gctcatgtcagagtgttcaacctctcacgcagggaggccaagccactgtgtaatgctaag
aacatggctgaactcattcctgacctgggagctctgaaatcagtcaagtgcaacgctaac
ggcagccaactcagcatcctgatcacacaggtaaatgggcgtcctgctcacagggtgtat
ttctatgatgtggagatggacacactctctcactttgacttctttactggtcgacctctc
agcagcctctcacaatctgacgacaaccagagagctcagcgtaaggaggtggagcttgca
ggtcgttatccaatctctcagttctgggacgagactgagccacgcctctttgtgtgtgaa
acggttctggtgaactccgagtaccacatcgccaaccagtcacactccacggacatggtg
gatgttttggtggtgacgtttttcgtgactcaggagcacggcctcctccgtcaggactca
cagcccagaccagctgctctccagggattactggcactggatacaccgtactactactac
acctgcaagctcttgtttcggagaggtggagtctttctcccacatccaggagagcttgac
acgacgtctccggcccctgccgcacttccctcctccgcccagatggtggtgcggcgagct
ctgcgcgacttcgttggtttggagagctgtgagaagcagaccagggacgccatgctgaac
ttcagcttctacctcaccatcggggacatggacgaggccttcagagccatcaaactcatc
aagagtgaggccgtgtgggaaaacatggctcgtatgtgtgtgaagacttgccgtctggac
gtggcgcgtgtgtgtctggggaacatggggaacgcccgagcagctcgcgctctcagagag
gcggagaaagagccggagttggaggcacgagttgcagtgctcgctacacaactcggcatg
ctggatgaagctgaggctctgtatcgttcctgcgggaggttcgacctgttgaataagttt
tatcaggcgcgtggtgattggcagacagccatcgaaacggctgagagtcatgaccgcatc
cacctgcgtagcacctactacagctacgcacaacacctggagaacacgggcgacaagaac
ctgggccttacctattacgagcgttctgatacacaccggttcgaggttccccgtatgctg
atggaggacagtgtgtctctggagctctacatcaacaagatgaaggacaagtgcctgtat
aagtggtggggtcattatctggagagccaatcagagatggagtctgcgctgcgttactat
gactacgctcaggattacctgtctcaagtgcgtgtgcattgctacctggggaacatccag
aaggcgagcgagattgccaacgagacaggcaaccgagcggcgtcctatcacgtggcgcga
caatacgagagtcaggatcagatcagccaatcagtgcatttctacacgcgtgcgcaggcg
tacaacaacgccatccgactgtgtaaggagaaccatatggacgagcagctgatgaacttg
gcgctgctcagcaacgcggaggacatgatggacacggccgcctactatgaggagagggga
gagcacatggaccgagccgtgatgctgtatcacaaggcaggtcgtgtgtctaaagctctg
gagttggcgttcagtacggagcagtttggagcactgcagctgattgcagaggaactgaat
gagaacagcgacccggccgtgctcacacgctgctccgacttcttcatcaaacacacacac
taccacaaagccgtgcagctgctggtggctgccaagaagtatcacgaggcgctgcagttg
tgtttggaccagaacctgaccatcaccgaggatctggctgagagcatgaccgtgtcacaa
agctctgcccacctctcagaggaggagcgtaaggaactgctggagcgaatcgcagactgc
tgcatgcgccagggcaattatcacctagcaaccaagaaatacacacaagctgggaaaaag
atcaaggcgatgcgagcgctgctgaagtcgggtgatacggagaagatcgtgttcttcgca
ggtgtgtctcggcagaaagagatctacgtgatggcggggaattacctgcagtctctggac
tggaggaaagatccggaaatcatgaagaacatcatcagcttctacaccaaaggacgtgca
ctggagctgcttgccggcttctaccaggcctgtgcacaggtagagattgatgattatcag
gactatgagaaggcatatggtgccttaactgaatcctataagtgtctgtccaaagccaag
agtcgccatggagacgagacagacgagcgactcgcacaactcacacaccatctaacactc
atcaagagattcatacaggcacgcaggctgtatgagcaggaccctgcagcagctctatca
gagtgtgagtgtttgttagaggagtgtgatctggaccctgccgtgagagtaggagacgtc
tttggcttcatcatcgagcatcactgtcaacacgccagctaccagaaggcatggatgaag
ctggaggagctgagacgtttgcatccctcggtgaacgtgagtgtgtacataagtgctcgc
agtctggacgctctgcagaatgccatcggagtaagactcaaccatggagacaccacacac
actaacacacaccaccgtgacatggacaacacaaacacatgcacacacagtgacggagag
gatgaggatgaagtggaggaggacgagaacctgaatgactga
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integrated database retrieval system
