Ictalurus furcatus (blue catfish): 128615280
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Entry
128615280 CDS
T09387
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04140
Autophagy - animal
ifu04148
Efferocytosis
ifu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128615280 (vps16)
04148 Efferocytosis
128615280 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128615280 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128615280 (vps16)
Membrane trafficking [BR:
ifu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
128615280 (vps16)
Hops complex
128615280 (vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Beta-prop_Vps41
DUF740
Motif
Other DBs
NCBI-GeneID:
128615280
NCBI-ProteinID:
XP_053493194
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Position
12:9348322..9359332
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AA seq
835 aa
AA seq
DB search
MAFVTANWNPLGENFYRKIELYEMGWNLKDGLRDCLIAAAPYGGPIALLREPQRRSPSAR
PQLEIYSASGGTLANFPWKSGVVRQLGWTVCDDLLCIQEDGTVLVYDLFGSFKRHFSMGN
EVGQSQVVEAKVFHSPYGTGVAIVTGASRFTLATNIDDLKLRRLPEVPGLQGVPSCWAVL
MQDRQSKLLVASGADLFILDYGTCTAVSPPGLSPQATSIIHMCVSFSYKYLALFTDSGHV
WMGSTNLREKLSEVETKVRNPPKQMAWCRRPKSQQPSVVIMWDRYLLVVGVCKDTIPYHL
EDDSVLIPELDSVRIINATNHELLQEVPAACEEIFKIASMAPGALLLEAHKEYEKESQKA
DEYLREIKEQNLLGEAVRQCVEAAGNEHEAETQKTLLRAASFGKCFLSNFPPEPFVSMCR
DLRVLNAVRDYTVGIPLTHTQFKQMTVQVLTDRLVYRKLYPLAIEICRYLKTPEYQGVSR
VLKHWACCKVQQKEEADEVIARTISLKLGDAAGISYSEIANKAYECGRTELAIKLLEFEP
RSGEQVPLLLRMKRSQLALSKAIESGDTDLVYTVVTYLKNEMNRGDFFMTLRNQPVALSL
YRQFCKHQEQDTLKDLFNQDDDHQELGNFYVKASYKEKRLEARMSLLQSAVDEYNKAKNE
FAAKATEEEMRLLRFQRKLEEDKGECIHGFSLHDTLITLLSLGLHKHAEQLYKDFRVPDK
RYWWLKLTALADKADWEELEKFAKSKKSPIGYMPFVEECVKRNNKFEAKKYVSKVTPEQK
VKAHLAVGDLEGAADAAIERRNEGEISTILSRCSPTTDRLLVERLNRAKATATKK
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgtcacggccaactggaatcctcttggagagaatttttacaggaagattgag
ctgtatgagatgggctggaatctgaaggatggtctcagagattgtttaatagctgcagct
ccatacggtggaccaatcgctctgctcagggagcctcagcgccgctctcccagcgcccga
ccccagctagagatctattctgcgtctggtgggaccctcgccaactttccgtggaagagt
ggtgtggtgagacagctgggctggacggtgtgtgacgatctcctgtgcattcaggaagat
ggcactgttctcgtctatgacctctttggcagtttcaagagacacttcagcatgggcaat
gaggtgggacagagccaggttgtggaggccaaggtcttccattcaccatatggaactgga
gttgccatagtaacaggagcatcccggtttaccctggcaacaaacattgatgacctgaag
ctgaggaggttacctgaggtaccaggtctccagggggtgccatcttgctgggcagtgcta
atgcaggacagacagagtaaattgctggtggcaagcggtgctgatctttttattctggac
tacggcacctgcactgcagtgagccctccaggcctttctcctcaggccaccagtataata
cacatgtgtgtatcattcagctataagtacctggcactgtttactgactcaggccatgtg
tggatgggctccaccaacctgagggaaaaactcagtgaagttgagaccaaagtccgaaat
ccacccaaacagatggcatggtgtcgcaggcctaaaagtcagcagccctcagtggtgatc
atgtgggatcggtacctgttggtagtaggagtgtgtaaagacaccatcccataccacctc
gaggacgactcagttctgatccccgagctggacagtgttcgaattatcaacgccacaaat
catgaactgttgcaggaggtgccagctgcctgtgaggaaatctttaagatcgcttccatg
gctcctggagcgctgctgctggaggctcacaaagaatatgagaaagagagccagaaggcg
gatgagtatctgagggagattaaggagcagaatctgttgggggaggcagtgaggcagtgt
gtggaggcagcaggaaacgagcatgaggcagagacgcaaaaaacactcctaagggcggct
tccttcggaaaatgttttctcagtaattttcctcccgagccgtttgtcagcatgtgtcga
gacctgcgagtgttaaatgcagtgagagattacaccgtgggaattcctctcacacacact
cagttcaaacagatgactgttcaagtgctcacagaccgactagtatatcgcaagttgtat
cctctggccatcgagatctgtcgctatttgaaaactcctgagtaccagggtgtgagtcgt
gtgctcaagcactgggcctgctgcaaggtgcagcagaaagaggaggctgatgaggtcatt
gcaaggaccatcagtttaaagctgggtgatgctgctggaatctcctactctgagatcgca
aataaagcctacgagtgcggacgcactgaactcgctataaagctgctggagtttgagcct
cgctctggtgagcaggttcctctgctactgaggatgaagaggagccagttagcactcagc
aaagctatcgagagtggagacacagacctagtgtatacagtggtaacatacctgaagaat
gagatgaacagaggagacttcttcatgactcttaggaaccagcctgtggcccttagcctc
tatagacagttctgtaagcatcaggaacaggatacgctgaaggatctctttaatcaagat
gacgatcaccaggaactgggcaatttctatgtgaaagctagttacaaagaaaagaggctg
gaagctcgcatgtctttattacaaagtgcagtggatgagtacaacaaggcaaagaatgaa
tttgctgccaaggccacagaggaggagatgcgtctcttgcgtttccagaggaagctggag
gaggataaaggcgagtgcatccatggtttctctctgcatgacacgctgatcaccctgctg
tctttgggtttgcacaagcacgcagagcagctctacaaggacttcagagtgcctgataag
aggtattggtggctgaagctgacagcactggctgataaagcagactgggaggagctcgag
aaatttgccaaaagcaaaaaatcacccattggctacatgcccttcgttgaagagtgcgtg
aaacgaaacaacaaatttgaagccaagaaatatgtgtcaaaagtcacaccggagcagaag
gtcaaagcccacctggcagtaggtgatttagaaggggcagcagatgcagctattgaaagg
aggaacgagggagagatcagcaccatcctgtctcgttgttcccccaccacagaccgtttg
ctggtagagcgtctcaatcgcgctaaggccactgccaccaaaaagtga
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