Ictalurus furcatus (blue catfish): 128615315
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Entry
128615315 CDS
T09387
Symbol
ddx17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ifu03041
]
128615315 (ddx17)
Enzymes [BR:
ifu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128615315 (ddx17)
Spliceosome [BR:
ifu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
128615315 (ddx17)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
128615315
NCBI-ProteinID:
XP_053493263
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All DBs
Position
12:complement(6791201..6806432)
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AA seq
663 aa
AA seq
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MRGSSSYGDRDRDRGRDRGPRFGSSRGGPPPKKFGNPGERLRKKKWDLSELPKFEKNFYS
EHPEIQRMNQYEIEEFRRKKEITVRGSGCPKPVPNFHQAQFPQYVMDVLLQQNFKEPTAI
QAQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELA
QQVQQVAYDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLR
RCTYLVLDEADRMLDMGFEPQIRKILDQIRPDRQTLMWSATWPKEVRQLAEDFLHDYIQI
NIGALELSANHNILQIVDVCMENEKENKLIQLMEEIMAEKENKTIIFVETKKRCDELTRR
MRRDGWPAMCIHGDKSQPERDWVLSEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPN
SSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLEEARQAINPKLLQLVDSGRG
SGGGRMRYRNSSSNSNNPNLMYQDECDRRLRSGSGSSSKDSRGGGSYHREGRSSRDDRSS
SSSSYRDRSRDSRNSYSSGDQYQSYNSSGGGGYSSRAGGVSQSGGGSNGVSGGGQQNQSG
PPQGPFNQGPPPPPQPGPGPGPQPLMAQQFAPPPPPQPMMGFMGPGPYSFGPPPPPPPQQ
QRK
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggcagctcttcgtacggggacagagaccgagaccgtggacgggaccgagggccc
cgctttgggtccagtcgtggaggtcctcctcctaagaagtttgggaaccctggagaacga
ctgaggaagaagaaatgggaccttagtgagctgccaaagtttgagaaaaacttctacagc
gagcacccagagatccagcgcatgaatcagtatgagatcgaggagtttcgccgaaagaaa
gagatcactgtcaggggctctgggtgcccgaagccagtgccaaacttccaccaggcacag
tttcctcagtatgtgatggatgtactgctgcagcagaatttcaaggagcccacagccatc
caagcacaaggcttccccctggctctcagtggcagggacatggtgggcatcgcgcagacc
ggatctggcaaaacgctcgcttatctgcttccggccattgtgcacatcaaccaccagccg
tacctggagagaggagatggacccatctgtctggttctggctccaacacgtgaactagca
caacaggtgcagcaggtggcgtacgactacggcaagtcttcccgaatcaagagcacctgt
gtgtatggaggagcccctaagggtccacaaatcagagacttggaaagaggtgttgagatt
tgcatcgccacccctggtcgtctgatcgacttcctggaggcagggaagaccaacctgcgc
cgatgcacctacctggtgctggacgaggcagaccgcatgctggacatgggcttcgagcca
cagatccgcaaaattttagatcagatccggccggacagacagacactgatgtggagcgct
acctggcctaaggaggtgcgtcagctggcagaggacttcctccatgactacatccagatc
aacatcggggccctggagctcagcgccaaccacaacatcctgcagatcgtggacgtctgc
atggagaacgaaaaggaaaacaagctgattcagctgatggaggaaatcatggcagagaag
gagaacaagaccatcatttttgtcgagacaaagaaacgctgtgatgagctgacgcgcagg
atgaggagagatggatggccagcaatgtgcattcatggtgacaaaagccagccagagaga
gactgggtcctttcagagttccgcagcggtaaagctcccatccttatcgctactgacgtc
gcctcacgtgggctggatgtggaagacgtgaagttcgtcattaactacgactacccgaac
tcttccgaggactatgtgcaccgtatcgggcgtactgcccgtagcaccaacaaaggcaca
gcttacacgttcttcacacccggaaacctgcggcaggcccgtgacctggtacgcgttcta
gaggaggcccggcaggccatcaaccccaaacttctgcagctggtcgactctggacgcggg
tcaggaggaggacgaatgcgttaccgtaactccagctccaactccaacaaccccaacctg
atgtaccaggatgagtgcgataggcgcctgcgctccggcagtggaagcagtagcaaggac
agccggggcggcggcagctaccaccgagaggggcgctcaagccgtgacgacagatcttcc
tcctcgtcttcataccgagatcgcagccgagatagccggaatagctacagctcaggcgat
cagtaccagagctacaacagcagcggagggggagggtacagctcaagggctggtggagtt
tcacagtcaggtggtggcagtaatggtgtgtcaggcggagggcagcagaaccaatccgga
ccaccacagggcccatttaatcagggtcctcctccaccaccacagccagggcctggaccg
gggccacagcccctgatggcccagcagtttgccccacctccaccacctcagcccatgatg
ggatttatgggtccagggccatactcgtttggtccacctccgccaccccctcctcagcag
cagagaaaataa
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