Ictalurus furcatus (blue catfish): 128615476
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Entry
128615476 CDS
T09387
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ifu01002
]
128615476
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ifu04121
]
128615476
Enzymes [BR:
ifu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128615476
Peptidases and inhibitors [BR:
ifu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
128615476
Ubiquitin system [BR:
ifu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128615476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Motif
Other DBs
NCBI-GeneID:
128615476
NCBI-ProteinID:
XP_053493582
LinkDB
All DBs
Position
12:complement(2229123..2288366)
Genome browser
AA seq
2564 aa
AA seq
DB search
MTATTRGSPMGSSDNQGQSQAPDGQSQAPDSQNQAPLPQNQTTSPNSSNETSPLSPLEGH
NQGDAQQAQEEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIALSKKGLDV
KSEACQRFFRDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVVKLSQDWFPLL
ELLAMATNPHCKFHIYNGTRPSESVPAGPQLADDELFACPPDVRSPKGWLVDLINKFGTL
GGFQILHDRFMSGQSLNVQIIAALMKPFGQCYEFLTLHTVKTFFLPVIEMVPQFLENLTD
EELKKEAKNEAKNDALSMIIKSLKNLASRLPGQEETVKNLEIFRLKMILRLLQISSFNGK
MNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVE
KLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDYLFDC
FKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSA
HIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQTQ
RSPHVFYRHDLINQLQHNHALVTLVAENLSAYMENMRQFSKEHLGFDPQTVRVGSRYSHV
QEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLMGDEPDL
DPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGL
DYLWRVVIQGSDDIANRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQSCFDRLKASYDTLC
VLDGDKDSINCARQEAIRMVRVLTVLKEYINECDSDYHEERTILPMSRAFRGKHITLVVR
FPNQGRQVDDLDIWSHTNDTIGSVRRCILNRIKANSTHTKIELFIGGEIVDPADDRKLIG
QLNLKDKTLITAKLAQVSSHMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESCLPGVIM
SLHLRYISFLWQVADLGCTLNMPLLRDGARVLMKLIPPDNTTVENLRAICLDHAKLGENS
LSPTLDSRFFGPSPSQVLYLAEVVYALLMPASGTLGEDASDFQYNFLKSGGLPLVLGMLT
RNNFLPNTDMETRRGAYLNALKIGKLLLTAIGFGHVKAVAEACQPVVEGTNPTSPINQAT
HDQALVLQNALQNIPNPASECMLRNVAIRLAQQIFDENFFQASKYIPDISVIRAVQKIVW
ASGCGSIQLVFSPNEDISKIYEKNNAGNEPDMEDEQVCCVALETMTLCFALIPTALDTLS
KEKAWQTFIIDLLLHCQSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVLGSTAKE
RAKHAGDYFTLLRHLLNYAYNSNINMPNAEVLLNNEIDWLKRIKDEVKGTGETGVEETIL
EGHLGVTKELLAFQTPEKKFCIGCEKGGANLIKELIDDFIFPASNVFLQYVKTGEFPAEQ
AIPVCSSPASINAGFELLVALAVGCVRNLKQIVDTLTEMYYQGCETLTEWEYLPPVGPRP
TKGFVGLKNAGATCYMNSVIQQLYMIPSIRNGILAIEGAISDVDDDMSGDEKQDNESNVD
PRDEVFNYHQQFDDKPSLNKAEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFR
LWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPSMLSRVLGGSFADQKICQGCPHRYE
CEESFTTLNVDIRNHQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPV
LAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLENSEVSSERQVINQNAP
LDPELGGSSRYRLVGVLVHSGQASGGHYYSYIVQRHSNSVDGQRDRWYKFDDGDVTECKM
DDDEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTVSIDGELLKHIA
EMTLVPKTHHLKMPSAIECGVRKQNVQFMHSRMQYSLEYFQFVKKLLTCNSVYLNPPPGQ
DYLLPEAEEIAMITIQLAARFLFTTGFHTKKVVRGPASDWYDALCILLRHSKNVRSWLAH
NVLFAFPTRFSEYLLECPSAEVRGAFSKLIVFIAHFSLQDGPCPAPVTSPGSSTQACDSM
TLSDHLLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKTQLLKLNVPATFMLVAL
DEGPGPPIKYQYAELGKLYTVVSQLLRCCDVSSRMQSSINGNPALPNPYGDSNLTAPIMP
LQQLVAEILFVRASYVKKIIEDCSNSEETVKLLRFCCWENPQFSSTVLSELLWQVAYSYS
YELRPYLDLLLQILLIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKC
MVALFSNCSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGNPQYSYNNWSPPVQSNE
TSNGYFLERSHSARMTLAKACELCPEEEPDDQEAPDDHESSPPEDTALYPHSPGAQYQQP
NNHTHGQPYTGPAAQHMNNPQRAPQRTQDSWEGTDEVLPVQTKE
NT seq
7695 nt
NT seq
+upstream
nt +downstream
nt
atgacagccaccacccggggttcccccatggggagcagtgacaaccagggacaaagccaa
gccccggatggtcagagccaagccccggatagccagaatcaagctcctctaccccagaac
cagacaacttcccccaactcttctaatgaaacatccccattgagcccactggagggacat
aatcagggtgatgctcagcaagcacaggaagaggaggagccagcattcccccacacagac
ctggccaagctggatgatatgatcaaccggcctcgttgggtggttccagtcttgccaaag
ggggaactagaagttctacttgaagctgctatagctctaagtaaaaaggggcttgatgtg
aagtctgaggcatgtcagaggttttttcgagatggcctgacaatttcattcacaaaaatt
ctgacagatgaggcagtgagtggttggaagtttgaaattcatagatgtatcatcaataac
acccatcggctggtggagctatgtgtggtcaagctgtctcaagattggtttccattgctt
gagctcctagccatggcaaccaacccccactgcaagtttcacatctacaatggaacacgc
ccatctgagagtgtacctgctggtccccagctcgctgatgatgagctgtttgcatgccca
ccagatgttcggtcacctaaaggctggttggtggaccttataaataaatttggcacactt
ggggggttccagattctgcatgatcgtttcatgagcggccaaagtcttaatgtgcagatt
attgcagctctaatgaagccatttgggcagtgttatgagtttttgacattgcacacagtg
aagacgtttttcttgcctgtgatagaaatggttccacagtttctggagaatctcacagat
gaagaacttaagaaggaagccaagaatgaggccaaaaatgatgctctttctatgataatc
aagtccttgaagaatctagcatcgcggttaccaggccaagaagaaactgtcaagaattta
gaaatctttaggttaaaaatgatccttaggttattgcaaatttcttcttttaatggaaaa
atgaatgcactaaatgaagtaaacaaggtgatctcaagtgtttcatattacacccatcgc
catggcaacccagaggaagaggagtggctcactgcggaacggatggcggaatggattcag
cagaataacattctgtctattgttctgagggacagcctgcaccagcctcagtatgtggag
aagctagagaagatattgcgttttgtaataaaagaaaaagcacttactctacaagacctg
gacaacatctgggctgcacaggctggtaagcatgaagccattgtgaagaatgtccatgac
ctgttggctaagttggcttgggatttctcaccagagcagcttgactatctgtttgactgc
ttcaaggcaagctggacaaatgcaagtaagaagcagagggagaagctgctggagttgatc
cgccggctggcagaggatgacaaggatggtgtgatggctcacaaggtgcttaacctgctg
tggaacctggcgcatagcgacgatgtccctgtcgacattatggatcaggccctaagtgcc
catattaagattttggactacagttgttctcaggaccgggacacgcagaagattcagtgg
atcgaccgttttatcgaagaattgcgaaccaatgataagtgggtgatcccagcattaaaa
cagatccgagagatctgcagcctgtttggcgaggcccctcagaatcttagccagacgcag
cggagtcctcatgtgttctaccgacatgacttgatcaaccagctgcagcacaaccatgca
ctggtcacactggttgcagagaacctgtctgcttacatggagaacatgcgacaattctct
aaagagcatctaggttttgaccctcagacagttcgtgtgggcagccgctacagccatgtg
caagaagttcaggagagactcaacttcttgagattcctattgaaggatgggcagttatgg
ctgtgcgctcctcaagctaagcagatttggaagtgcctggcagagaatgcagtcttcctc
tgtgaccgtgaggcttgtttcaaatggtattccaaactcatgggtgatgagcctgacctt
gacccagacatcaacaaagacttctttgagaacaacgtgctgcagctggacccctcacta
ctgacagaaaatgggatgaagtgctttgaacgcttttttaaggcagtgaattgcagggag
ggcaagctagtagccaagcgcagggcttacatgatggatgatctggagctcataggcctt
gactacctctggagggttgtgattcaaggaagtgatgacattgcgaatcgggcaatagat
ctgctgaaagaaatttacacaaaccttggaccaaaattacaagtcaatcaggttgagatc
catgaagacttcatccagtcctgtttcgatcgcctaaaggcctcatatgacacactttgt
gtgctggatggagataaggacagcataaattgtgctcgacaggaggccattcgtatggtc
agagtgttgactgtgcttaaagagtatattaacgagtgtgacagtgactaccacgaggag
agaaccattcttcccatgtcccgggcgtttcgtggaaagcacattaccctggtggtgcga
tttcctaaccagggtcggcaggtggatgacctggacatctggtctcatactaatgacacc
atcggctcagtacgccggtgcatcctgaaccgcatcaaagccaacagtacacataccaaa
atcgagcttttcattggaggagagattgtggacccagctgatgaccgcaagctaattgga
cagctcaatcttaaagacaaaactctgatcacagcaaagttggcccaagtcagctcccac
atgccctccagtcctgacagctcctctgactcatccactggctcacctgggaaccatggc
aaccactacagtgatggacccaacccagaggtggagagctgcctgccaggagtgatcatg
tcactgcacctgcggtatatctcattcctgtggcaagttgctgatttgggctgcacttta
aacatgcctttactgcgggatggagccagagtccttatgaagctcatacctccagacaat
actacagtggagaacctgcgcgcaatctgtctggatcatgcaaagctgggagagaacagt
ctcagtcccaccttagattctcgcttcttcggcccctcaccctcacaagttctctatctt
gctgaggttgtgtatgcccttcttatgccagccagtggcactctgggtgaagatgccagt
gatttccaatacaacttccttaaaagtggaggtctcccactggtactaggcatgctcacc
aggaataacttcctgcccaacaccgacatggagacgcgtcgtggtgcctacctaaatgct
ctgaaaattggcaagctcctgctcactgccattgggttcggtcatgttaaagcagtggca
gaggcttgccagcctgtggtggagggcacaaaccctacatcaccaataaatcaggcaact
catgaccaggccctggtgcttcagaatgctctccagaacatccctaatcctgcttcagaa
tgcatgttgcgcaatgtggctatccgactggcccagcagatctttgatgagaatttcttt
caggcatcaaagtacatcccagacatcagtgtaatacgagcagtgcagaaaattgtgtgg
gcttcaggctgtggaagcattcagctcgtcttcagccccaatgaggatatcagtaagata
tatgagaagaataatgcgggtaatgagccagatatggaggatgagcaggtatgctgtgtg
gctctggagaccatgacactctgttttgctctcataccaacggccctggatacactcagc
aaagagaaagcttggcagaccttcatcatcgacctgctattgcactgccagagcaagtca
gtgcgtcagatggctcaggagcaatttttcctcatggccaccagatgttgtatgggtcat
cgacccctccttttcttcatcaccctcctcttcactgttctgggaagcactgcaaaggaa
agggcaaagcatgctggtgattacttcaccctcttgaggcacttacttaactatgcatac
aacagcaacataaacatgcctaatgcagaagtcctgctcaataatgaaattgactggttg
aaaagaatcaaggatgaagtaaagggaacaggcgagactggggtggaagagaccatactt
gaaggtcacctgggagtcaccaaggagcttttagcattccagacccctgagaaaaagttc
tgtattggctgtgaaaagggtggggccaaccttatcaaggagctaatagatgatttcatc
ttcccagcatctaatgtgttcctacagtatgtcaagactggagagttccctgctgagcag
gcgatcccagtgtgcagcagtcctgcctccattaatgctggttttgaactgcttgtggcc
cttgctgtgggatgtgtacgcaatcttaagcagattgttgacactctcacagaaatgtac
taccaaggctgtgagactcttacagaatgggaatatcttccacctgtggggccgcgaccc
actaaaggatttgtaggtctgaagaatgccggagccacatgctacatgaactctgtgatc
cagcagttgtacatgattccctctatccgaaatggcattctggccatagagggtgctatc
agtgatgtggatgacgatatgtctggagatgaaaagcaggacaatgagagtaatgtggac
cccagagatgaagtgttcaattatcatcaacaatttgatgacaagccctctctcaataag
gctgaggatcgcaaggagtacaatattggagtgctgcgccacctgcaagtcatatttggt
caccttgctgcatctcggctacagtactatgtacctagagggttctggaaacagttcagg
ttatggggcgagccagtcaatctgagggaacaacacgatgctctggagttctttaactct
ctggtagacagcctggatgaagcactgaaggcccttgggcatcccagcatgctcagcaga
gtcctgggtggctcatttgcagaccagaaaatctgccagggctgtcctcacagatatgag
tgtgaagaatccttcacaacactgaatgtagacatcagaaaccatcaaaacctcctagat
tccttggaacagtatgtcaaaggagacctgctggaaggagccaatgcttatcattgtgag
aagtgcaacaagaaggttgatactgtgaagcgcctcttgattaagaagcttcctccagta
ctagccattcagctcaagcgttttgactatgattgggagcgtgaatgtgccataaaattt
aatgattactttgagttcccacgtgagttagacatggagccatacactgtggcaggagtg
gccaagctggagaacagtgaggtttcttccgagaggcaagtcatcaaccagaatgcaccc
ttagacccagagttgggtggaagttcccgttaccggttagtaggagttctggtgcactca
gggcaggccagcggtgggcattactactcctacattgtccaacggcacagcaacagtgtt
gatggccagcgagatcgctggtacaagttcgatgatggtgacgtgactgagtgcaagatg
gatgatgatgaggagatgaagaaccagtgctttggtggagagtacatgggtgaggtattt
gaccacatgatgaagcgcatgtcatatcggcgccaaaagcgctggtggaacgcctacatc
ctgttctatgagcgcatggacacagtcagcattgatggagagctgttgaaacacatagca
gagatgacactggtgccaaagactcaccatctcaagatgccctcggccatcgagtgtggt
gtgcgcaagcagaatgtgcagttcatgcacagccgcatgcagtacagccttgagtacttc
cagtttgtcaaaaagctgctcacttgcaatagtgtctacctgaacccacccccaggtcaa
gattacctgctacctgaagctgaagaaatagctatgataactattcagcttgctgctaga
ttcctgttcactacaggattccataccaaaaaagtagtccgaggccctgctagtgactgg
tatgatgccttgtgcattctactgcgtcacagtaagaatgtccgcagctggttagcacac
aatgtcttgtttgcattccccacgcgcttctctgaatatctgctggagtgcccaagtgcc
gaggttcgtggagccttctccaagctcatagtcttcattgcacacttctcactgcaggat
ggcccatgccctgccccagtcacgtcaccaggctcctccacacaggcctgtgacagtatg
acactgagtgatcacctactgcgggctgtgcttaacctgttgagaagggaggtatctgag
catggccgacatcttcagcagtacttcaacctttttgtcatgtatgccaatctcggttta
gcagaaaagacacagctgctgaagttgaatgtgccagctaccttcatgttggtggctttg
gatgagggtcctggcccccctattaagtaccagtatgcagagcttggcaagctttataca
gtagtgtctcagctgctgagatgttgtgatgtatcatcacgtatgcagtcctcaattaac
ggtaatccagctctaccaaacccatatggtgactccaatcttacagctcccatcatgcct
ctacagcaacttgtggcagagatattgtttgtgcgtgccagctatgtaaagaaaatcatt
gaggactgcagtaactctgaggagactgttaaactgctacgattctgctgctgggagaac
cctcagttctcatccactgtgctcagcgagcttctctggcaggtggcatactcctatagt
tatgagctgaggccttatttggacctgctacttcagatcctgttgattgaggactcatgg
cagacacacagaatccacaatgtgctaaaggggattcctgatgatcgggatgggttgttt
gataccatccagcgttccaagaatcactaccagaagagggcttatcagtgcattaagtgc
atggtcgcgctcttcagcaattgctctgtggcctaccagatcctacagagtaatggcgac
ttgaaaagaaaatggacatgggcagtagagtggttgggtgatgagctggagaggaggcca
tacacaggaaacccacaatacagttacaacaactggtctcctccagtgcagagtaatgaa
acctctaacggctacttcctggaacgttcacacagtgccagaatgacgctggccaaagca
tgtgaactctgtcctgaggaggagcctgatgatcaggaagctcctgatgaccatgaatcc
tcccctccagaggacacagcactctaccctcactcacctggggcacagtatcagcagcca
aacaaccacacccatgggcagccatacacaggcccagctgcccagcacatgaacaaccct
cagcgtgccccccagaggactcaggacagctgggagggcacagacgaggtgcttcctgtc
cagacaaaagagtag
DBGET
integrated database retrieval system
