Ictalurus furcatus (blue catfish): 128615504
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Entry
128615504 CDS
T09387
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04120
Ubiquitin mediated proteolysis
ifu04137
Mitophagy - animal
ifu04144
Endocytosis
ifu04340
Hedgehog signaling pathway
ifu04350
TGF-beta signaling pathway
ifu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128615504
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
128615504
04350 TGF-beta signaling pathway
128615504
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128615504
04137 Mitophagy - animal
128615504
09144 Cellular community - eukaryotes
04520 Adherens junction
128615504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128615504
04121 Ubiquitin system [BR:
ifu04121
]
128615504
03029 Mitochondrial biogenesis [BR:
ifu03029
]
128615504
Enzymes [BR:
ifu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
128615504
Membrane trafficking [BR:
ifu04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
128615504
Autophagy
Mitophagy
Other mitophagy associated proteins
128615504
Ubiquitin system [BR:
ifu04121
]
Ubiquitin ligases (E3)
HECT type E3
128615504
Mitochondrial biogenesis [BR:
ifu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
128615504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
128615504
NCBI-ProteinID:
XP_053493635
LinkDB
All DBs
Position
12:complement(5706020..5792569)
Genome browser
AA seq
759 aa
AA seq
DB search
MSNPGARRNGPVKLRLTVLCAKNLSKKDFFRLPDPFAKVVVDGSGQCHSTDTVRNTLDPK
WNQHYDLYIGKLDSITISVWNHKKIHKKQGAGFLGCVRLLSNVINRLKDTGYQKLDLNKL
GPNNNDAIRGQIVVSLQSTDRIGTGGPLVDCSRLFDNDLPDGWEERRTATGRIQYLNHIT
RTTQWERPTRPASDYANPGRPLSCLLDENTPILSSNGASGITHTNSRAQERRVRSQRHRN
YMSRTHLHTPADLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEELGPLP
PGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPSGSRGVENPNLSCAPQLKEQ
PVLCNLPEETEECLTAPKYKRDLVHKLKVLRQELSQQQPQAGHCRIELCRDEIFEESYRQ
VMKMRQKDLWKRLMVKFRGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQYSRDDIYTLQI
NPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKSITLDDMEAVDPDL
HNSLVWILENDTTGVLDHTFCVEHSAYGQIIQHELKPNGKNIPVTEETKKEYVRLYVNWR
FLHGIEAQFLALQKGFNEVIPQHLLKAFDEKELELIVCGLGKIDIHDWRANTRLKHCTAD
SNVVKWFWNAVESFDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRQFTIQQIDASTNN
LPKAHTCFNRIDIPPYETYDKLYDKLLTAIEETCGFAVE
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatccaggggcgaggagaaatggtccggtgaaactgcggctcacagttctctgt
gcaaagaacctgtcaaagaaggacttcttcagacttccagacccctttgctaaagtggtg
gtggatggttctggtcagtgccactcgacagacacagtcaggaacacactggacccaaag
tggaaccagcactatgacctttatattgggaagctggactcaatcaccatcagcgtatgg
aaccataagaagattcacaagaagcagggagcagggtttctgggctgtgtgcgtctcctc
tccaatgtcatcaaccgcctcaaagacactggctatcagaagctagacctgaacaagctt
gggccaaacaataatgacgccatcagagggcagatagttgtgagcttgcagtccacagac
aggataggaacgggaggccccttggtggactgcagccgtctgtttgacaacgacttaccg
gatggctgggaggagaggagaacggcaacaggcaggattcagtatctcaatcacatcaca
cggacaacacaatgggaaagaccaaccaggcccgcctcagattatgcaaatcccggtcgg
cccctcagctgtctgttggatgagaacacgcccatcctgagttctaatggagcctccggc
atcacacacaccaactccagagctcaggagagacgtgtccgctcacagaggcacagaaac
tacatgagcagaacacacttacacacacctgctgatctgcctgagggatatgagcagaga
accacacaacagggccaggtctacttcctccacacacagaccggggtgagcacatggcat
gacccgcgtgtgcccagggatctcagtaacgtgaactgtgaagagctcgggccgctccca
ccaggctgggagattcgaaacacagcaacgggccgggtgtacttcgtggaccacaacaac
aggaccacacagttcacagacccgcgtctctcagctaacttgcacttagtcctcaatcca
agtggatctcgtggtgtggagaatccgaacctcagttgtgccccccagctgaaggagcag
cctgtgctgtgtaatctccctgaggagactgaagagtgtttaactgctcccaagtataag
cgggatctggtgcataagctgaaggtgttgaggcaggagttgtctcagcagcaaccacag
gctggccactgtcgcatcgagctctgtagagatgagatctttgaggagtcctatcggcag
gttatgaagatgaggcagaaggacttgtggaagaggctgatggtgaagttcagaggagag
gaggggcttgattatgggggcgtggccagagaatggctgtacttgttatcccacgagatg
ctcaacccgtactacggtctgttccagtactcacgtgatgacatctacacacttcagatc
aaccccgattctgcagtcaacccagagcacctgtcctatttccactttgtgggccggatc
atgggcatggcggtgtttcatggccattacatcgatggaggcttcactctgcccttctac
aaacagttactgggcaaatccatcacactcgacgacatggaggccgtggacccagaccta
cacaacagcctcgtctggatcctggaaaatgacaccacaggtgtactggaccacacattc
tgtgtggagcacagcgcttacggacagatcatccagcacgagcttaaacccaacggcaag
aacatccccgtcactgaggagactaagaaagagtatgtcagactgtatgtgaactggcgc
ttcctacacgggattgaagcccagtttctggcgctgcagaaaggcttcaacgaggtcata
ccacagcacctactcaaggccttcgacgagaaggagctggagctgatcgtgtgcggtctg
gggaagatcgacatccacgactggagggcaaatacgcgtctgaagcactgcacggctgac
agcaacgtggtgaagtggttctggaatgctgtggagtcgtttgatgaggaacgcagagcc
agactcctgcagtttgtcaccggctcatcgcgagtgcctctgcaaggcttcaaggcctta
cagggtgctgccgggcccagacagttcaccatccagcaaattgatgccagcaccaacaac
ctgcctaaagcccacacatgttttaaccgcatcgacattcctccctacgagacctacgac
aaactatatgacaagttgctgactgccatcgaggagacctgcggctttgcggtcgaatga
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