Ictalurus furcatus (blue catfish): 128615645
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Entry
128615645 CDS
T09387
Symbol
vars2
Name
(RefSeq) valine--tRNA ligase, mitochondrial
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
128615645 (vars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ifu01007
]
128615645 (vars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ifu03016
]
128615645 (vars2)
Enzymes [BR:
ifu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
128615645 (vars2)
Amino acid related enzymes [BR:
ifu01007
]
Aminoacyl-tRNA synthetase
Class I (U)
128615645 (vars2)
Transfer RNA biogenesis [BR:
ifu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
128615645 (vars2)
Prokaryotic type
128615645 (vars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Val_tRNA-synt_C
SR-25
Motif
Other DBs
NCBI-GeneID:
128615645
NCBI-ProteinID:
XP_053493838
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All DBs
Position
12:22813444..22832355
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AA seq
1077 aa
AA seq
DB search
MWRTTWGRCFRPGSGVWRTWRRGLCSPPSSSSSSSSSSSQPLQSLRSQSEQAKRKRKREK
AILSSDVGSVGIKWSEKEKISYTAAFLPGEKKDTTLPLPQSYSPEYVESCWYQWWEQQGF
FSPEKHSEMPHAVDEYFSLCIPPPNVTGTLHLGHALTVAIEDALARWRRMRGYRVLWVPG
CDHAGIATQSVVERRLLQEHGKRRQDYSREEFLQEVWRWKNEKGDEIYRQLKKLGASLDW
SRACFTMDASFSNAVTEAFVRMCDSGLIYRSESLVNWSCALESAISDIEVDSKQLSGRTL
LSVPGYQRKVEFGTMVTFAYPIEGQQGEVAVSTTRPETMLGDVAIAVHPDDPRYQALHGK
QCRHPFTDRLLPIITDTMVDMELGTGAVKLTPAHDHTDFRLSQRHSLPRLAVIGGDGAMT
SVCGQWLEGVKRFEARERVISALMERKLFRGKRDHAMSLPICSRSGDVIEPLLKKQWFVR
CEEMAQKAIQVVDDGELEIIPHFYTKTWKNWLANISDWCISRQLWWGHQIPAYRVTSPLS
PTQEEQWVWGRNESEARERAAVKCGVDPTAVVLTRDPDVLDTWFSSGLFPFAMLGWPEQT
EDLKEFYPNTILETGSDLIFFWVARMVMLGTELTGQLPFKQVLFHSLVRDKHGRKMSKSL
GNVIDPLDVISGVSLERLQENVMEGNLDARERAVALEAQRKDFPKGIPECGTDALRFALC
SYKAQGEDISMSVSQVLSCRHFCNKMWQTVRFTLGSLLDTGAPPTPLAETFPASRIDRWI
CSRLYSTVVQCDKGFESYELHTVTSALHSFWLHSLCDVYLECIKPVLKQDVNENEEKQIA
TAVLYHCVSISLRLLSPFMPFLTEELWQRLQPYSPNPTPAPSSVCVQPYPTASQLGHWHF
PEEETDFPLVQEVVRVARSLRAQCHMTKERPDMWAVCTADQAQTLHSFSHAICILGRITN
LYLHCPQEGTSSLSFSPAPPPHERSTIGVTDHSVQLHLDVQSCSNNNKQTIVLSERREKL
LIKLEQFLSRTRVPNYTEKVPDHVRQETGNKIAALEQELKSIEKQLLALEPVKKDSK
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgtggaggaccacctggggcagatgtttcagaccagggtctggcgtgtggcgtacatgg
agacgcgggctgtgttctccaccttcctcctcctcctcctcctcctcatcgtcatcacag
cccttacagtctcttaggtctcagtcagaacaggccaagcggaaaagaaagagagagaag
gccatacttagcagcgatgttggcagtgtcgggataaaatggtcagaaaaagaaaaaata
tcatacactgctgcattcttgcctggagagaagaaagataccactctgcccctcccgcag
tcctacagcccagaatatgtggagtcgtgctggtatcagtggtgggagcagcagggattc
ttcagccctgagaagcatagtgagatgcctcacgctgtggatgaatatttctccctctgt
ataccaccaccgaacgtgacgggcacgctgcacctcggccacgctctgacggtggcgatc
gaggacgctttggcacgctggcggagaatgcgaggctacagagtgttgtgggtgccgggc
tgcgaccacgctgggatcgcaacacagtcagtggtggagaggaggctgttacaggagcat
ggaaagcgccggcaggattacagtagagaggaattcctgcaggaggtgtggaggtggaaa
aacgagaaaggagatgagatttatcggcagttaaagaaacttggagcttcgctggactgg
agcagggcctgtttcaccatggacgcgagtttcagtaatgccgtgactgaggctttcgta
aggatgtgtgattcagggctgatctaccgctctgaaagcctggtcaactggagctgtgca
ctagagtcggccatctctgatatcgaggtcgactcgaagcagttatcaggccggactctt
ctgtctgttcctggctaccagcgaaaagtcgaatttgggaccatggttacgttcgcctac
ccgatagagggacagcaaggagaggttgccgtgtcaaccactcgtcctgagaccatgctg
ggggacgtggccatcgctgtgcatcctgacgatcctcgataccaggctctccatggaaaa
cagtgcaggcacccgttcacagaccgactgttacccatcatcacagacactatggtggac
atggaattgggaacgggagctgtgaagctgactccggctcacgatcacaccgacttccgg
ctctctcagagacactcgctgcctcgcctcgctgtgatcgggggagacggagccatgacg
tccgtttgtggccagtggctcgagggcgtgaagcgattcgaggccagggagcgtgtgatt
agtgcactgatggagagaaagttgtttcgagggaagagggatcacgccatgtctttaccg
atttgcagccgatctggagacgtcatcgaacctctgctgaagaaacagtggtttgttcga
tgtgaggaaatggcacagaaggcaattcaagtcgtggatgacggagagctggaaataatt
cctcacttctacactaaaacgtggaagaattggctcgctaacatcagcgattggtgcatt
tccagacaactttggtggggacatcaaattccagcttacagagtgacatcaccactttct
cccacacaggaggagcagtgggtctggggtcggaatgaatcggaggccagggaacgtgcc
gctgtcaaatgtggagtggaccctaccgctgttgttctgactcgagatccagatgtgttg
gacacgtggttctcttcaggtcttttccctttcgcgatgttgggctggcctgagcagacg
gaggacctgaaggagttctatcccaacaccattctggagacaggaagtgacctcatcttt
ttctgggtggcgcggatggtgatgctaggcactgagctgactggacagctgcccttcaaa
caggtgctcttccactccctggtgagggataagcacggtcggaagatgagcaagtctctg
gggaatgtcatcgaccctttggatgtaatctcgggtgtctctctggagagacttcaagaa
aacgtaatggaaggaaacttggatgcgagagagagagcagttgcgttggaagcacagagg
aaagatttcccaaagggtatcccagaatgtggcacagatgcgttacggtttgctctctgc
tcctacaaagcccagggagaggacatcagcatgtccgtgtctcaggtcctgagctgtaga
cacttctgtaataagatgtggcagacggtccgcttcactctgggatctctgctggacaca
ggagctcctccgacaccactggccgagacctttcctgcgtcaaggatagacagatggatc
tgttcgagactttacagtacagtagtacagtgtgataaaggctttgagagctatgagctc
cacaccgtcacctccgctctgcattccttctggctccacagcctctgtgacgtgtatctg
gaatgcattaagccagttttgaagcaggacgtgaatgaaaatgaagagaagcagatcgcc
actgctgtgctctatcattgtgtgtccatttctctccgcctactttctcctttcatgcct
tttctcacggaggagctctggcaaagattgcagccctatagcccaaaccctactccagct
ccatccagtgtgtgcgtgcagccatatccaacagcctctcagctggggcactggcacttt
cctgaagaggaaacggattttccattggtacaggaagtggtcagggtggccaggtcactc
agggcccagtgtcacatgacgaaggaacgacctgacatgtgggcagtgtgcacagcagac
caggcacaaacactccacagcttcagtcacgctatctgcatcctgggccggatcactaat
ctatatctgcactgtcctcaggagggtaccagctccctgtccttctcccctgcaccacct
ccacatgaaaggagtaccattggggtgactgaccattcagtccagttacaccttgatgtg
cagagttgcagtaataataacaaacagacgatcgtactttctgagcgaagagaaaaactt
ctcattaaacttgagcaattcctgtctcggacaagagtaccaaactacacagagaaggtt
cctgaccacgttcggcaggagacggggaataagatcgctgcactggagcaggaactaaag
agcatcgagaaacaacttttggctttggagccggtcaaaaaagactctaagtag
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