Ictalurus furcatus (blue catfish): 128615649
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Entry
128615649 CDS
T09387
Symbol
usp40
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 40 isoform X1
KO
K11869
ubiquitin carboxyl-terminal hydrolase 40 [EC:
3.4.19.12
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ifu01002
]
128615649 (usp40)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ifu04121
]
128615649 (usp40)
Enzymes [BR:
ifu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128615649 (usp40)
Peptidases and inhibitors [BR:
ifu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
128615649 (usp40)
Ubiquitin system [BR:
ifu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128615649 (usp40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
YukD
Motif
Other DBs
NCBI-GeneID:
128615649
NCBI-ProteinID:
XP_053493844
LinkDB
All DBs
Position
12:complement(13364804..13377479)
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AA seq
1244 aa
AA seq
DB search
MSMFGDLFEEEEDITTNSITQGKGKVCEPPPPRGKLKLCGIRNQGSTCYLNSLLQTLLHT
PEFREELFSLGPEELGKLEDKDKPDAKVRVIPLELQNLFARLLLLDEQSTTTTALTESFG
WTNNEEMAQQDVQELNRILFSALESSLVGTSGSSLIRRLYHGTLINNITCNECHNVSERE
EDFLDLTVCVRGVCSLEEALWSMFVEEEVFDGNNLYHCSNCDRLVHATKSAKLRKLPTFL
TVSLLRFSFDFEKCERFKETRRYSFPLSINLRPFCEQSDQPDSELTYELFSIIIHKGGCY
GGHYHAYIKDIDHLGHWELPEDDIKQKKQKVQVKPPSVSVCNAAVEKDDPLSVLTAVLAQ
ESGSVLLDQLGQKLMEKIGCSWNKKYRKQYGPIRKFLQSNPDVFVLLLNGSRVALRNPAE
TPEQGAGPKSVAESAQDGSEAGSDLGLEAEPVSGHWFDLNDSTVTVIRESDIIKQYEGKE
SAYMLFYRKHTLQRPCHAVGNPVYGVPAHLLQMVEEENAKLQQRRTEFEVSSNSIDVRLH
FASHYRVESGALKLIDTHTDAHTLTLSFDRRRSVGDLRLAVYQMQDTWEGDMALTIAKNL
PAGLHLYNTLTDDHQSLYSAGVYNGSDLFVWNGTEVNGVRVQTGAECEPLLLNILRPGGA
ELDSVGMADVESVGEASVADASGLVQVMRGFSGGVTLGGVREALSLQEALVCQLTKGVGP
GGEGGGASRWKVCSPEAMRRTLKELTLRDGDTLLLLPHTHLNNSIFSVSEDVVTVMTPSD
CRWLQVEFHTHTTQEEEEEEKVMKIPAAGSTLLSEVKQRALEEMQLQEHFTGGVCCLRQR
DRTGKLLPPVREDLSVCDAGIKLMTSLCLCPGHAPNSSQLFLFFSVTPPTGPELEIIVEE
TLTVKECLMAMLQEAGLDGTCWHLRRMDWCEEVGEPLMDENASLLEMGVVNGDTLVITEG
QLPPKGFLKLAVSWFMDMSDECERNHTTESRTTGLQSVGCVEISEEATLHELRCQVLTLP
ALVQVCVPSLECLRVWLVEGKKLIRILRGNQLTLRKLKLSVGSEVCVQKLQCEENLGVKD
ILLRLQVGVAKEEVGMFEESAYFPTHEYVWEAGLDSSPRGLYHAVSTHCGISPENLLLAK
HLPEQHTWITINYEIQSMSKKKKKQNKSNSKGVNLQGAPYCLRDGDTIAVKNLMIDSNRE
FGTVKNEEQILREQTEQRGHSRSSEKKKNRKPEVALSINVGVFR
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgttcggagatctgttcgaagaggaagaagatatcacaactaacagcatcacc
cagggcaaagggaaggtgtgtgagccgccacctcctcgagggaaactgaagctgtgcgga
attagaaatcagggatcaacatgttacctcaactctctactgcagaccctgttacacaca
cctgagtttagagaggagttgttcagtttgggacctgaggagctcggcaaactggaggat
aaagacaaacctgatgctaaggtgcgtgttattcctctggagttgcagaatctgtttgct
cggttgttgttgttggatgaacaatcaacgacaactacagcgctgacggagagctttggc
tggacaaacaatgaggagatggctcagcaggatgttcaggagttaaacaggattttgttc
agtgcattagaatcatctctggtcgggacatctggctccagtctgatacggagactttat
catggaaccctgatcaacaacatcacctgcaacgagtgtcacaacgtcagcgagagagag
gaggacttcctggacctgacagtgtgtgttcggggtgtgtgcagcctggaggaggcgctg
tggagcatgtttgtcgaggaggaagtgtttgatggaaataatctgtatcactgcagcaac
tgtgaccgactcgtccatgctaccaagtctgctaaactgaggaagctccctacatttctc
accgtgtccctgctacgcttcagctttgattttgagaagtgtgagaggtttaaggagacg
agaaggtacagcttcccgctcagcatcaacctgcggccgttctgtgaacagtcagaccag
ccagattctgagctgacctatgagctcttctccatcatcatacacaaaggtggatgttat
ggaggacattaccatgcctacatcaaagacattgaccatcttggccactgggagctgcct
gaggatgatattaaacagaagaagcagaaagtccaggtgaagccccccagcgtgagcgtg
tgtaatgctgctgtagagaaggacgacccgctgtctgtactaacggctgtactggcgcag
gagtctggcagtgtgttgttggatcagcttggtcagaagttgatggagaaaattggctgt
tcctggaataagaaatacaggaagcagtatggaccaatcaggaagtttctgcagtctaac
cctgacgtgtttgtgttgctgctgaacggctcccgtgtggctctcagaaacccagcagaa
acacctgagcagggggcggggccaaaatcagtagcagagagtgcccaggatgggtcggag
gcgggatcagacttgggtttggaggcggagcctgtgagcggccactggtttgacctgaac
gactcaacggtgacggtgatcagagagagtgacatcatcaaacagtacgaggggaaagag
agcgcgtacatgctgttctacaggaaacatacactgcagagaccatgccatgcagtgggt
aatccagtttatggagttcctgctcacctgctgcagatggtggaggaagaaaacgccaag
cttcaacagaggaggacagagtttgaagtcagcagtaacagtattgatgtccggctccac
tttgcttctcattaccgcgttgagagcggagcactgaagctcatcgacacacacacagac
gcacacaccctcaccctgagctttgaccgcaggaggagtgtgggagacctgagactggct
gtctaccagatgcaggatacatgggagggggacatggcactgaccattgctaagaacctg
cccgcaggactacacctgtacaacacactgacagacgatcatcagtctttgtacagcgct
ggagtgtataacggctccgatctctttgtttggaacgggacagaggtgaatggtgtgcgt
gtgcagaccggagccgagtgtgaaccattgctattgaacatcctgaggccaggtggggcg
gagctggactcagtgggcatggctgatgttgagtcagtgggcgaagcctcagtagcagat
gcctctggtcttgttcaagtgatgcggggattttcaggtggagtcacactgggcggtgtg
cgggaggctctcagcctgcaggaggctctggtgtgtcagctgacaaaaggggtggggcca
ggtggagaaggaggtggggccagcaggtggaaggtgtgttcacctgaggccatgaggagg
acactaaaagaactgacactccgggatggagacacactgctgttgctgccacacacacac
ctgaacaacagtatattcagcgttagtgaagatgtggttactgtgatgacgccgtcagac
tgtcgctggctgcaggtggagtttcacacacacacaacgcaggaggaagaggaggaggag
aaagtgatgaagattcctgccgcaggaagcactttgctgagtgaggtgaaacagagagcg
ctggaagagatgcagctgcaggagcacttcacaggtggtgtgtgttgtttgagacagagg
gacagaacagggaaacttttacctccagtccgtgaagacctcagtgtgtgtgatgccggt
atcaagttgatgacatcactgtgtctgtgtcctgggcacgccccaaattcctcacagctc
ttcctgttcttcagtgtgacgccacctacaggcccagagctggagatcatcgtagaggag
acactcactgtgaaggagtgtttgatggcgatgctgcaggaggctggactcgacggaacg
tgctggcacttgaggaggatggattggtgtgaggaagttggggagcccctgatggatgag
aatgcctctctgttggagatgggagtggttaatggagacacactggtgatcactgaggga
caacttcctccaaagggatttctgaaattggcagtgagctggtttatggatatgagtgat
gagtgtgagagaaatcacacaacagaatcacgcactacaggcctgcagtctgttggttgt
gttgaaatctcagaagaggccacactacatgagctcaggtgtcaggtgctgactctacct
gcactggtgcaggtgtgtgttccatctcttgaatgtctacgtgtttggttggtggaggga
aaaaaactcattagaattctcagaggaaaccaactcacactcaggaagttgaagttgtct
gtgggatctgaggtgtgtgtgcagaagctgcagtgtgaggagaatcttggggtgaaggac
atcctgctgcgtctgcaggtgggtgtggccaaggaggaggtgggcatgttcgaagagagt
gcctatttccccacacatgagtatgtgtgggaggcggggctagactcctcacccaggggg
ctgtaccatgcagtctccacccactgcggaatctcacctgagaacctgctgctcgctaaa
cacctgcctgaacaacacacctggattaccatcaactacgagattcagtcaatgtccaaa
aagaagaagaaacagaataagagtaacagtaaaggagtgaacctgcagggggcgccatac
tgcctgagagacggagacactatagccgtgaagaatctgatgattgacagtaatcgggag
ttcggtacagtgaaaaatgaagaacaaatactcagagagcaaacagagcaaagaggacac
agtagaagctcagagaagaaaaagaacaggaagccagaagtggccttgtcaatcaacgtg
ggtgtgttcagatag
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integrated database retrieval system
