Ictalurus furcatus (blue catfish): 128615668
Help
Entry
128615668 CDS
T09387
Symbol
si:ch211-106h11.1
Name
(RefSeq) volume-regulated anion channel subunit LRRC8D
KO
K22038
volume-regulated anion channel
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ifu04040
]
128615668 (si:ch211-106h11.1)
Ion channels [BR:
ifu04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
128615668 (si:ch211-106h11.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_1
LRR_R13L1-DRL21
LRR_LRWD1
LRR_9
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
128615668
NCBI-ProteinID:
XP_053493880
LinkDB
All DBs
Position
12:complement(26586602..26594243)
Genome browser
AA seq
908 aa
AA seq
DB search
MFTLSELWSVTERQGHYKLLKPWWEVFMDYLVLLMLMVSILAGTLLLSQDGVVCVPIRST
SSNSSASFGIPSGPGTPHTASNVPISRSLATGIRTDLDYQQYIYVSTVCYHKALPWFSRF
LPYVTLLQSLLLLASGSFWFHFPLTSARIEHFLAILAKCCESPWTSRALSHAAKLDRAHH
SLPSDEDKVTRTQVPHIPKFFTRQSSLDSGTDSPLLARMGSTSTQPSPCPSNLSHCSTLS
SISILEPASLHKAATVLPEGSSTGPTLDRSDGEQARALFERVRRFRGHCESSNIIYKVYT
AQTVFKVLKFIVIVSYTTPLLGSISFTHTCEPHSHALTGYQTFQCSHLLSSVLRKLMKAY
ICLVGLYGLLGVYTLFWIFHNFQSSMEMNANKSVNRSGAIEQLATEDLLQITSLRQYSFQ
HLREIGSMLDAPDLCNDLAFLLHMTDQYDPLLAQRLSVFLSPVSETRLMEENLERRWNAA
RLRSMITSDHKGRALLQLVAVPHLPPALFTLSQLEVLKLELIGDAKLTAQISNMTALREL
HLYHCSATVESGALIVLQERLESLHLTFTQAAEIPGWVYSLRSLQELHLSGRVASEGTIG
RGWALGSLRYLRHLRVLALRGMLQRIPSELSEVAGSLVHLEIHNEGARLLVLTGLRRLVG
LTELELQGCQLERLPSALLSLTGLRSLDLQHNCLRTLEELLGLQHLRRLSCLRLAHNRIL
AVPTSVGVLRALELLDLSHNELRSLPPALFTIHRLRRLLLAGNLLEELPAEVGALTLLTE
LDLSRNRLERIPEALFANCKELRILSLANNSLGSLNMGLGSLRHLSKLDVQGNNLEELPI
ELGCCSGLRGGGLLVESWLLHTLPCHIRDFLQQPSCASSKANSRPCSDTFPAFSAAQWSF
LSSVESRI
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgttcactctgtcagagctctggtctgttactgagagacagggtcactataagctgctg
aagccatggtgggaggtcttcatggactatctggtgctcctcatgctcatggtgtcaatc
ctggccgggactctattactctcacaggacggggtggtgtgtgtccccatacgctccacc
tcaagcaactccagcgcttcttttggaattccctcaggtcctggtacacctcatactgcg
tcaaatgtccccatatccaggagtctggctacaggcattcggactgaccttgactaccag
cagtacatctatgtgagcaccgtgtgctaccacaaagctctgccgtggttctcacgcttc
ctgccctatgtcaccttactgcaatcgttgctcctgctggctagtggttccttctggttc
cactttccgctcacctctgcccgcattgagcactttttagccatccttgccaagtgctgt
gagtcgccctggacctccagggcactttcccatgctgccaagctggacagagcacatcac
agtctcccatcagatgaggacaaagtgacaaggacccaagtgccacacattcctaaattc
tttactcgacagtccagccttgactccgggactgacagccccctgctggccaggatgggt
agtacctccacccagccttctccatgtccatccaatttgtcacactgctccacactgtcc
tctatctcaatcctagaacctgcttctctgcataaggcagctactgttcttccagaaggt
tctagcaccgggcccacgctggaccggagtgacggagaacaggccagagcgctgtttgag
agagtccgcaggttccggggacactgcgagagctctaatatcatttacaaggtgtacaca
gctcagacggtgttcaaagtgctgaagttcattgtgattgtgagctacaccacacctcta
ctgggttccatctcttttactcacacctgcgagccccattcccacgctttaacaggatac
cagaccttccagtgcagccacctgctatcatctgtcctgcgcaagctgatgaaagcctac
atctgtctcgtgggcctttacggcctgctgggtgtctacacccttttctggattttccac
aactttcagtcgagcatggagatgaatgctaacaaaagcgtcaatagaagtggtgctatt
gagcaactagcaacagaggatctgctacagattacgtctctgagacagtactcgttccag
catctgcgtgaaataggttccatgttggacgctccagacctgtgtaatgacctggccttc
ttgttacacatgacggatcagtacgaccccctgctggctcagcgtctctcagttttcctg
tcacctgtcagtgagacacggctcatggaggagaacttggagcgtcgttggaacgccgcc
cgtctgcgctcaatgataacctccgatcacaaggggcgcgctctgctgcagctggtggcc
gttcctcatctccctcctgcactcttcaccctgagccagctggaagtgctgaagctggag
ttaattggagatgctaagctaacagcacagatctccaatatgactgccttgagggagctt
cacttgtaccactgctcagctactgtggagtctggtgcacttatagtcctccaggagcgt
ctagagtctctgcacctcaccttcacccaagctgcagagatccctggctgggtgtattca
ctgcgcagcctgcaggagctacacctgagtggacgagtggccagtgagggcactatcggc
cgtggctgggcgctgggcagcctacgctatttgcgccacctacgggtcctcgcgttgcgt
ggcatgctccagagaatcccatcagagctgagcgaggttgcgggcagcttggtgcatttg
gagatccacaacgaaggtgccaggctgttggtgctaacaggactgcgacgtcttgtgggg
ttgactgaactggagctgcagggatgccagctggagagattgccttctgctttgttatcg
ctaacaggattgcgcagtttggacctgcagcacaactgcctaaggacactggaggaactg
ctgggactgcagcatctgaggcgtctttcctgcctacgattggcccacaatcgcatactg
gctgttcctaccagcgtgggagtcctgcgggccttggagctcttggacttgtcacacaat
gagctgcggagtcttccaccagctcttttcacaatccatcgactccggcgcctcctgctg
gctgggaacctgcttgaggaactgcctgctgaagtgggggcactcactctcctcactgag
ctcgacctgagcaggaacaggctcgagagaattccagaggcactttttgccaactgcaag
gagttgcgcattctgagtttggccaacaactccctagggtcgctgaacatgggattgggc
tctttgaggcacctttccaagctggatgtacaaggaaacaaccttgaggaactgcccatt
gagcttggttgctgctcagggctccgtggaggtggtttgctggtggagagctggctgctc
cacactttgccatgtcacatcagagacttcctccagcagccatcttgtgcttcttccaaa
gctaattcccgcccttgttccgatacattccctgccttctctgccgcccagtggagcttt
ctctcatctgtggaatcacgcatatag
DBGET
integrated database retrieval system
