Ictalurus furcatus (blue catfish): 128615669
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Entry
128615669 CDS
T09387
Symbol
ddx39ab
Name
(RefSeq) DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab isoform X1
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ifu03041
]
128615669 (ddx39ab)
Enzymes [BR:
ifu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128615669 (ddx39ab)
Spliceosome [BR:
ifu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
128615669 (ddx39ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
128615669
NCBI-ProteinID:
XP_053493882
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All DBs
Position
12:complement(26572652..26581598)
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AA seq
445 aa
AA seq
DB search
MDEDEDDVCSTLQDKTLRMAENDADNELLDYEEDEEPQVAPESVTPAGKKEVKGSYVSIH
SSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLAT
LQQIEPVDGQVSVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGLPIKKDEDVLKK
NCPHIVVGTPGRILALIRNKTLGLKNVKHFVLDECDKMLEQLDMRRDVQDIFRLTPHEKQ
CMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLD
VLEFNQVVIFVKSVQRCVALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVA
TNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDETDAKTLNDV
QDRFEVNVAELPEEIDISTYIEQSR
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggatgaagatgatgtgtgctcgactctacaagacaaaacactccgcatggct
gagaacgatgccgataacgagcttttggactacgaggaggacgaggagcctcaggtagca
ccagagagtgtcaccccggctgggaagaaggaagtgaagggttcgtacgtgtccatccac
agctccggcttcagggacttcctgctcaaacctgagctcctgagggcgattgtggactgc
ggcttcgagcatccgtccgaagtgcagcacgagtgtatcccacaggccatcctgggcatg
gacatcttgtgccaggcgaaatcgggtatggggaagactgcggtgtttgtcctggccacg
ctgcagcagatcgagcccgtggatggacaggtgtcggtgctggtgatgtgtcacacgcgt
gagctggccttccagatcagcaaagagtacgagcgcttctccaagtacatgcccacggtg
aaggtggccgtgttcttcggcggcctgcccatcaagaaggacgaggacgtgctgaagaag
aactgcccacacatcgtggtggggacgcccggccgcatcctcgccctcatccgcaataag
acgctcggcctcaaaaacgtcaaacacttcgtcctggacgagtgcgataagatgctggag
cagctcgatatgaggcgtgatgtgcaggacatcttcagactcacccctcatgagaagcag
tgcatgatgttcagcgccaccctgagtaaagagatccggccggtctgccgcaagttcatg
caggatccgatggaggtgtttgtggacgacgagacgaagctgacgctgcacggcctgcag
cagtactactgcaaactgaaggacagcgagaagaaccgcaagctctttgatctgctcgat
gttctcgagttcaaccaggtggtgatctttgtgaagtctgtgcagcgctgcgtggctctc
tctcagctgctggtggagcagaacttcccggccatcgccatccacagaggcatggctcag
gaggagaggctgtcacgctaccagcagtttaaagacttccagaggaggatcctggtggcc
actaacctgtttggcagagggatggacatcgagagggtcaacatcgtcttcaactacgac
atgcctgaggactcggacacgtacctgcacagggtcgcccgcgctggccgtttcggcact
aaaggtctggccgtgacgtttgtgtccgatgaaactgacgccaaaacgctgaacgacgtg
caggaccgcttcgaggtcaacgtggccgagctaccggaagagatcgacatctccacttac
atcgaacagtccagatga
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integrated database retrieval system
