Ictalurus furcatus (blue catfish): 128615843
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Entry
128615843 CDS
T09387
Symbol
sfpq
Name
(RefSeq) splicing factor, proline- and glutamine-rich isoform X1
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ifu01009
]
128615843 (sfpq)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ifu03021
]
128615843 (sfpq)
03041 Spliceosome [BR:
ifu03041
]
128615843 (sfpq)
Protein phosphatases and associated proteins [BR:
ifu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128615843 (sfpq)
Transcription machinery [BR:
ifu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
128615843 (sfpq)
Spliceosome [BR:
ifu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
128615843 (sfpq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Amino_oxidase
Motif
Other DBs
NCBI-GeneID:
128615843
NCBI-ProteinID:
XP_053494168
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Position
12:complement(19638021..19657843)
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AA seq
602 aa
AA seq
DB search
MSRDRFRNRGGFQQRGRGGGGGMRGGMGTPNFRNNPQHSFQNRGPQPGGGFKPNQGNQAN
QVILQKPEGSNVTVKPDIKSPPPTPQQQQPDAQNKIPAQQQQVQPPPTPQPPIQSPPPKN
INTKPEPTTPQNQPRKTQQKTPVSGNGQKPPNNDGQTSRAADTSGSQELKASFSMLRKPG
EKTYTQRCRLFIGNLPNDITDAEFRKLFAKYGEPSEIFINQGKGFGFIRLESRALAELAK
AELDDKPMKGRPLRVRFATHSAALSIRNLSPYVSNELLEEAFSQFGVVERAVVIVDDRGR
SVGKGIVEFATKPAARKALDRCSDGVFLLTASPRPVVVELMEQFDDEDGLPEKLAQKNPN
YQKEREQPPRFARPGTFEFEYSQRWKSLDDMEKQQRQQVEKNINEAREKLEAEMDDAYHE
HQANLLRQDLLRRQEELRRMEEMHNQEMQKRKEMQLRQEEERRRREEEMMRQREMEEQMR
RKREESYRMGGFMDNREREMRMSAGGGLGLADMPFGSNNQRFPLARMGFDGHQGLGGPVA
GGMVPNEMADDHLCQGHFVITCPSKRSGNFRHGKQSNKVMHATLAFHYGFLTSPTTIKGH
CF
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtgaccgtttcaggaatcgcggaggatttcagcagcgaggccgaggaggcggc
ggaggaatgcggggcggaatgggaacaccaaactttagaaataatccacagcattcattt
caaaaccgcggcccacagcctggtggtggttttaagcccaatcaaggaaatcaagcaaac
caagtcatcctgcagaaaccagagggatctaatgttaccgtcaagcccgatataaagtct
cctcctccaacgccacagcagcagcagcctgatgcacagaacaagataccggcccaacag
cagcaggtacagccgcctccgaccccacaaccaccgattcagtcacctccgccgaaaaac
atcaataccaaaccagaacccacaactccacagaatcaaccccgaaaaactcagcaaaag
acaccagtcagtggaaatggccaaaagcctcctaacaatgacggccagacatcgcgtgca
gctgatacctccggatcgcaggaattaaaggcttcgttctcgatgctgcgcaaacctggg
gagaaaacctacactcagcgatgccggctgttcatcggcaatttgcccaacgacattacc
gacgcagagttcagaaaactgtttgccaagtatggcgagcccagtgaaatcttcattaat
caaggcaaaggttttggcttcataaggctggagtcacgtgctttggcggaacttgcaaag
gctgaattggatgataagcccatgaaaggcaggccgctcagggttcgctttgctactcat
tcggctgcattatccatccgtaatctgtccccgtatgtctccaatgagctcctcgaggag
gctttctcacagtttggagtggtcgaaagggcagtggttatagtagatgaccgtggccgc
tctgttggaaaaggcatcgttgagtttgcaaccaagccggcagctcgaaaagctctggac
cgttgcagcgatggagtcttcctactcacagcctcacctcgtccggttgttgttgagttg
atggaacagtttgatgatgaagatggtctgccagagaagcttgcccagaagaacccaaat
tatcagaaagagcgagagcagcccccacgtttcgctagaccaggcaccttcgagtttgaa
tactcacagcgatggaagtctctcgatgacatggagaaacagcaaaggcagcaggtggag
aaaaatattaacgaggcccgcgagaagctggaggcagaaatggatgacgcttaccatgag
caccaagctaacctgcttcgtcaggatcttcttaggcgacaagaggaactgcgtcgcatg
gaagagatgcataatcaggaaatgcaaaaacgcaaagagatgcagcttaggcaagaggag
gagcgccgcagacgggaggaggaaatgatgcggcagagagaaatggaagaacagatgagg
cgcaagcgtgaggagtcgtacagaatgggtggttttatggacaatagggaaagggagatg
aggatgagtgctggaggaggtcttggattggcagatatgccatttgggtcgaacaaccag
aggttcccattggccagaatgggttttgacggtcaccagggactcggcggaccagtggca
gggggcatggtgcccaacgaaatggctgatgaccatctatgtcaaggacattttgtaatt
acctgcccaagcaaacgatcaggaaatttcaggcatggtaaacaaagcaacaaggtaatg
catgctacacttgcatttcactatgggtttctcacatcccccacaaccataaaaggtcat
tgcttttaa
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