Ictalurus furcatus (blue catfish): 128616176
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Entry
128616176 CDS
T09387
Symbol
arid1ab
Name
(RefSeq) AT-rich interactive domain-containing protein 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128616176 (arid1ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128616176 (arid1ab)
03021 Transcription machinery [BR:
ifu03021
]
128616176 (arid1ab)
03036 Chromosome and associated proteins [BR:
ifu03036
]
128616176 (arid1ab)
Transcription factors [BR:
ifu03000
]
Eukaryotic type
Helix-turn-helix
ARID
128616176 (arid1ab)
Transcription machinery [BR:
ifu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
128616176 (arid1ab)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
128616176 (arid1ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
128616176
NCBI-ProteinID:
XP_053494692
LinkDB
All DBs
Position
12:complement(14410051..14485280)
Genome browser
AA seq
2245 aa
AA seq
DB search
MAAQVAALSPSPAAELKKPDRDAQEDSIPGETQQEIKDNGGSPGQKELQDGTEVANAPGG
RRGGGGGGGGGGGGGDPDMKNGNDNSSRMNNSNNNNQNDLDANSHPGIAHHHPSVFPPPP
YGCNQHYNRGPFHQHGGQQSPGMAPGSIMEPYPTNSHDHGFPNHYNNYGPFPNRTQYQGQ
GYGMNSPRTNQASQPGKQQQQPGGTLMAGSYNNQRYNMSNPQPTPTPTLNQLLTSPSATR
GYQNYPQNDYNSQDGTSKGAGDMGSTNHYGGGHPPWQQRGHHAPPMSPGNTAHALNRNQT
PSPMDQVGKIRSQHYGAGNPYSQQQGPPPGAQQGPPFPGQGYGSPGPQRYPMTMQGRTPG
AMGGMQYGQQMGYGQQGPGAYGQSQGGYYGQQNPLTPHGGLQQGSYPQQHSSGPASQHPY
SQPQSGPPLSQGGPPYSHQPQAQSSYPQPPHSQPPYPQSQALSQSQGTPQSAQGSQQQPG
FPQATPGSGQPPPAPPPTQQQQQGATPQQPNVGPPQQSQQPMGHGPPQGHQPSPYTQTPP
TQPQQQTPFQRFPPPQQELSQDSFSSHASGSTSNQPMASSKSGTEDSMQGRPSSLPDLGS
IDDLPTGTEGALSPGVSTSGVSSSQGEQSNPAQSPFSPHTSPHMPGIRGPSPSPVGSPAS
ATPSRTGPLSPAGSQMPPRPSSVQSDGILHSSINQSAVGQDRVFIRNTQMPPYGSPQPAS
ALSPRPSSGGQVHAGMGHYPQNNSMGNYVPQGGQYVPQGYPRQPGYSGMTGPNYPGGPSM
GSPLNPMSGQGGGGAYSGMPPGRMGPGQMGSRPYGPGMSPNMGGIPPQVASGMCPPPGMN
RKPQDPTSAGMHPGPSNSIHRPPGYPAMTQGMIGAGSPYAPPINSMHGIMNQAGPYPMGG
NVANNSAGMAPSPEFAMDKVNQNQKTNNKADGTPKTESKKKSNSSTTTNEKITRLYELGT
EPERKMWVDRYLAFAEEKAMGMTNLPAVGRKPLDLFRLYVSVKEIGGLTQVNKNKKWREL
ATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFNNDPKKNQAKVQPPSPAG
SGSLQGPQTPQSTSSSMAEGNDLKPPTPASTPHSQMPPMPGVRSSVNVQDPFADGGDPAF
ARRSSMTPNSGFQPGMGGPPDIMSRLGPYEPNKDPFSGMRKAGEQFMNPGQGPSSGMSEQ
YNRGPPGPIANMQLGHRQQYGPYGPGYDRRQEPGMSPDGSIGPGAPQPNTMPSGADTGMY
SPNPQQQRHDSYVNQFPGQSAPSSGQYPNQQPGIYPQQTNYTQKRPGDGGYGPPAKRHEG
EMYPFSGQQQQGPQPSGGPQPQQDMYNQYNTYPATDRRPPGPQSQFPFGFGRDRAPNAGG
ANSQSSIPPQMMGSPLPSVPDGPQGPMWQGRNDVNFPNYPSRQGPPGVPTQGPGYHATNR
SEDMLPSDQRMNHEGPWPGHVNQRQPPYGPGGSGPPMSRTLQSNFQSTQNHIPQVSSPAP
MPRTMENSTSPSKSPYMHTGIKIQKAGPLVPAVHTAPTPVQHPMIRRDIAFPPGSVEATQ
PILKPRRRLMMKDIGTPEAWRVMMSLKSGLLAESTWALDTISILLYDDNSISTFSLCQLP
GFLELIVEYFRRCLIEIFGILKEYEVGDPGQRTLIDPDAADSDMSDEEIPEIGQMEEEED
KEEKSSQHSLQIQVKHEKDELIHEEKSCEMSEKEKEGEISSSKEHELSIPFQDSSAVQEK
LKQASKFDKLPIKLVWKKDPFVIGHTGKLGRRQTFDSGLIHWSVGGGDTTEHIQTHFESK
MELLKPHKPVNTEALPLAELVNENQNKDERIIPHQQNEQQTESQPSSGQPLEEKNTTAFA
SASATIMATVDDVLSGWSASVAEQSVQNCIEKEEEKNKFLFGIDPSQQISSIKILEDEPH
SKDESPLCTLSDWQDALARRCICVSNIVRSLSFIPGNDTEMSKHPGLLLILGRVVLLHHR
HPERKEAPVTYEKEEEEDEGVRCEQHEWWWDCLEVLRENCLVTLANISGQLDLSMYPESI
CLPLLDGLLHWAVCPSAEAIDPFPTLGLNGAVSPQRMVLETLSKLSIQDNNVDLILATPP
FSRLEKFYSSLVRLIGDRKVPVCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLE
DSLAATQFQQSQASLLHMQGTHFEPTSVDMMRRAARALHALAKVEENHSEFMLYESRLLD
VSVSPLLNSGVSHVICDVLFLIGQS
NT seq
6738 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgctgcgctcagcccgagcccagccgccgaactgaagaaaccggac
agagacgcgcaggaagactcgataccgggagagacacagcaggaaatcaaggataacggc
ggctctcctggacagaaagagctccaggacggcacggaggtagctaatgcaccgggagga
agaagaggaggaggcggtggaggaggaggaggaggcggaggaggggaccctgacatgaaa
aacggcaacgacaattcgtcccggatgaacaacagtaataataacaaccagaacgatcta
gacgctaacagtcacccaggcattgctcatcaccacccgagtgttttccctccaccacca
tacggctgcaaccagcactacaaccggggcccttttcatcaacatggcggacaacaaagc
cctggcatggcaccgggcagtataatggagccttatccgacaaactcacacgatcacggc
ttccccaaccactacaacaactatgggccattcccaaatcggactcaatatcagggccaa
ggatatggcatgaattccccgcgcactaaccaggcgagtcagccaggcaagcagcagcag
caaccaggaggaactcttatggcgggttcgtataataatcagaggtataacatgagcaac
cctcagccaaccccgaccccaactttaaaccagcttctgacatcacccagcgccaccaga
ggctaccagaattacccacagaatgactataacagtcaggacgggacgagtaaaggagca
ggggacatgggcagcactaatcactatggagggggtcatccgccctggcaacaaagaggc
catcacgcgccccccatgagcccggggaacactgcacacgcgctcaacaggaaccagacc
ccaagcccaatggaccaggtggggaagatcaggagccagcattatggagcaggaaaccct
tattctcaacagcaggggcctccaccaggtgctcagcaagggcctcccttccctggtcaa
ggctatggctccccaggaccacagagatacccaatgaccatgcagggacgcacccctggt
gctatgggaggcatgcaatacggacagcagatgggttatggacaacaaggcccaggagct
tatggccagagccaaggaggctactacggtcagcagaatcctcttactccccatggaggc
cttcagcagggttcataccctcagcagcattccagtggcccagcctcccagcatccatac
tcacaacctcagtcaggtcctcctctgtctcagggtgggcctccttactcccatcaaccc
caggcccagtcttcatatccccagcctccacattcccaaccaccttatccccaatcccag
gctctttctcagtcccagggtacacctcagtcagctcagggctctcagcagcagcctgga
ttccctcaagcaacgcctggttccgggcaacctccccctgctcctcctcctactcaacag
cagcaacaaggcgcaactccacagcagcccaatgtagggcctcctcagcaatcccagcag
cccatgggtcatggtcctccacagggacaccagccctcaccctatacacaaaccccacca
acacagcctcagcagcagacacccttccagcgcttcccacctccacagcaggagctatcc
caagactccttcagttcccatgcttccggttctacctcgaaccagcccatggcctccagt
aagagtggtacagaggacagcatgcagggccgtccttcaagtctgccagacctgggctct
atcgatgacctgcccacgggcacggagggtgcgctgagtccgggggtcagcacatctggt
gtctccagcagtcagggcgagcagagcaatccagctcagtcgcctttctccccacacacc
tcgcctcacatgccgggcatccgtggcccttcgccatcacccgtgggctcgcctgccagt
gcaacaccttctcgcacaggacccctttcacctgctggaagtcagatgcctcccagacct
tccagtgttcaatcagatggaatcttgcattcttccataaaccagtctgctgtgggccag
gatagagtcttcattcggaacacacagatgcctccttatggctctcctcagcctgcttct
gccttatccccacgcccgtcatctggaggccaagtgcatgctgggatgggtcattatcct
caaaacaactctatgggcaattatgtgccacagggaggacaatatgttcctcaaggctac
ccgaggcagccaggctatagtggcatgactggtcctaactatcctggtggtccaagcatg
ggcagccctctgaatcccatgtcaggacagggaggagggggtgcgtatagcggtatgcct
cctgggcgcatgggtccagggcagatgggctcaaggccgtacggtcctggcatgagtccc
aacatgggtggcataccacctcaggtggcttcaggcatgtgtcctccacctggcatgaac
agaaaaccccaagatccaacctcagcaggcatgcaccctggtccatctaactcgatacat
aggcctcctggttatcctgctatgacccaggggatgataggagctgggtctccgtatgca
ccgcctattaacagcatgcatgggataatgaaccaggcagggccgtaccccatgggaggc
aacgtggccaacaactcagcaggtatggcacccagcccagagtttgccatggataaggtt
aaccaaaaccagaaaacaaataataaagctgatgggactcctaaaactgaatcaaaaaag
aagtcaaattcgtccaccaccacaaatgagaaaataactcggctgtatgagctgggtact
gagccagagaggaagatgtgggtggaccgttacctggcctttgctgaggagaaagccatg
ggcatgaccaacctgccggcagtgggccgcaagcctcttgacctatttcggctctatgtg
tctgttaaagagattggtggccttacacaggtgaataagaataaaaagtggagggagttg
gcgacaaacctgaatgttgggacctccagtagtgcagctagctcactaaagaagcagtac
attcagtgtctgtacgccttcgagtgcaagattgagcgtggtgaggacccacctccggat
attttcaacaatgaccccaaaaagaaccaggcgaaggtacagccaccctctccagcggga
tctggatctttacagggccctcagactccacagtcgactagcagctccatggctgaagga
aacgatctgaaacccccaacccctgcgtcaacaccccacagccagatgcctcctatgcct
ggtgtgcggagcagtgtgaatgttcaagacccgtttgctgatggtggagaccctgccttt
gctagacggagctcgatgacgcctaactccggcttccagcctggaatggggggcccacct
gatataatgagtcgcttaggtccatatgagcctaataaggacccttttagtggtatgagg
aaagctggtgagcagttcatgaatccgggacaaggccccagcagtggaatgagtgaacaa
tataaccgaggccctccgggacctattgctaacatgcagttaggtcacagacaacagtac
ggaccctatggaccaggatatgaccggagacaagagccaggcatgagtccagatggcagt
ataggtcctggagccccacagccaaacaccatgccctctggtgctgacacagggatgtat
tcacctaatccacagcagcaaaggcatgattcctatgttaatcagttccctggccaaagt
gcaccctctagtggacaatacccaaatcagcagcctggtatctacccacagcagacgaat
tacacacaaaagaggcccggagatggtggttatggtcccccagcaaagcgtcatgagggg
gaaatgtatccattcagtggccagcagcaacagggccctcaaccctcaggtggaccccaa
ccccaacaggacatgtacaaccagtataatacctaccctgccacagatcgacgtccacct
ggtccacagagtcagttcccattcggttttggacgggacagggcgcctaatgccggaggt
gctaactctcagtcctccattccaccgcagatgatgggcagccccttgccctctgtccct
gatggcccccaaggtcccatgtggcaaggcagaaatgacgtgaactttcccaactatccc
agtcgtcagggacctcccggagttcccactcaaggtccagggtaccatgccacgaaccgt
tctgaagacatgttaccttcagaccagcgaatgaatcatgaaggtccatggcctggtcat
gtcaaccagaggcagcctccttatggacctggtggttctggcccacccatgtctagaaca
ctgcagtccaattttcagtccactcaaaatcacattccacaggtatcaagtccagcgccc
atgccaagaaccatggagaacagtacatcacccagcaagtccccttatatgcacactggg
ataaagattcagaaagctggacctctagtcccagccgtacacacagccccaacaccagta
cagcatcccatgataaggagagacatagcctttcctccagggtcagtggaggcgactcag
cccatcctcaaaccacgccgccgactcatgatgaaagatattggaacaccggaagcctgg
agagtcatgatgtccctcaaatcaggattgctggcagagagcacttgggctttggacacg
atcagtattcttctatatgatgataatagcatttctaccttcagtctgtgtcagcttcct
ggtttccttgaacttatagtggagtacttccgtagatgcctcattgaaatttttggcatc
ttgaaagaatatgaggttggagatcctgggcagcgaacactgattgatccagatgctgcc
gactcggatatgtctgatgaagaaattccagaaataggacagatggaggaagaagaggac
aaagaggagaagagtagccaacactcattacagatccaagtcaagcatgagaaggatgaa
cttatacatgaagagaaatcctgtgaaatgtctgaaaaagagaaggaaggagaaatatct
tcatctaaagagcatgagctatctattccctttcaggacagtagtgcagtacaggaaaag
ctcaaacaggctagcaaatttgacaagcttcccattaagctagtgtggaagaaagaccca
tttgtcattggtcacaccggcaagttgggccggcgacagacttttgacagtgggctgatt
cattggagtgttggtggaggtgacaccacggagcacatccaaacacactttgagagtaaa
atggagctgctaaaacctcataaacctgtcaatacagaggcacttcccttagcggaactg
gttaatgagaaccaaaataaggatgagagaatcataccacaccagcaaaatgagcagcaa
acagagtctcagccttcctcaggccaaccactggaggagaaaaacaccacagcttttgct
agtgcatctgctaccataatggccactgttgatgatgtgctgtctggttggtcggcatca
gttgctgagcaatctgtgcagaattgcatagagaaggaggaggagaagaacaagttcctg
tttgggattgacccatcacagcagatcagcagcattaagatccttgaagacgagccacac
agcaaggatgagtccccattgtgcacgttgtcagactggcaggacgcgctagcccggcgc
tgcatatgcgtctctaatattgtccgcagtctctccttcatccctggcaatgacactgaa
atgtccaaacacccaggcctgctgcttatactgggccgtgtggtacttctgcaccaccgg
catcctgagcgcaaggaggctcctgttacctatgagaaagaggaagaggaagatgaagga
gtccgctgtgagcagcatgaatggtggtgggactgtctggaggttctgcgagaaaactgt
ctggtcacgttggcgaacatctcaggccagttggacctgtccatgtacccagagagtatc
tgccttccactgctggatggtcttctccactgggctgtctgcccctcagcagaagccatt
gatcctttccctacgttggggcttaatggagcagtttctcctcagagaatggttcttgag
acccttagcaagcttagcatccaggacaataatgttgacctcattctggccactccaccc
ttcagtcgcctggagaaattctacagttcactggtacgcctaattggtgaccgtaaggta
cctgtgtgccgggagatggcagtggtgctgttggccaacctggcccagggtgacagcctg
gcagctcgggctattgctgtgcagaaaggcagtatagggaacctcctggggtttctggag
gacagtctagcagccacacagttccagcagagccaggcttcactgctacatatgcagggg
acacactttgaacccaccagcgtggacatgatgcggcgggctgcccgtgccctgcatgcc
ctcgccaaagtagaggagaaccactccgagttcatgttgtatgagtcacggctactggac
gtctctgtatcccccctcctgaactcaggagtgtcccacgtgatctgtgatgtactgttt
ctgattggccagtcatga
DBGET
integrated database retrieval system
