Ictalurus furcatus (blue catfish): 128616260
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Entry
128616260 CDS
T09387
Symbol
irx1b
Name
(RefSeq) iroquois-class homeodomain protein IRX-1b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128616260 (irx1b)
Transcription factors [BR:
ifu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
128616260 (irx1b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PFF1_TM
Trypan_PARP
Motif
Other DBs
NCBI-GeneID:
128616260
NCBI-ProteinID:
XP_053494815
LinkDB
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Position
12:22494310..22500699
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AA seq
417 aa
AA seq
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MSFPQLGFPQVYGLDRASPPRDGGSESGGGVTGSPASSAAALAPLLGVYAHPWSAHRYGA
FMPYSSAEAALLNHMGSQYELKENPGAHPAGFAVHTAPGFYPYSQYQYGDPARAKSATRE
TTSTLKAWLQEHKKNPYPTKGEKIMLAIVTKMTLTQVSTWFANARRRLKKENKVTWGRSA
EDVDGCGYDSDRDDDDESAHKHEREEEIDLETVDTDEAEEEVRKEPSDAKAHEQSETESE
SADTRALNSPAGSVAASKDAIAGKSGSEDVSPGCQRPVNSKPKIWSLAETATSPDNCQKA
SSLSTAVTAHPAFLSTNGIYTCQIGKLNSWTGGAFLGAGPLIGVRSLMGVSPSSHYITSS
AQSESPTHSLSLSPQHNTDREHVQRTESPALPLRPSFPVIHDRSHHETAQRALKTVS
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccctcagctgggcttcccgcaggtgtacgggctggacagagcgtctccgccg
cgggatggcggctcggagagcggcggcggagtcaccgggagtcccgcgagctctgcggct
gcgctcgctccgctgctcggcgtgtacgcgcatccgtggagcgcgcaccggtacggagcc
ttcatgccgtacagcagtgccgaagcagcgctcctcaatcacatgggctcccagtacgag
ttgaaggagaaccccggtgctcacccagccggattcgcggtgcacaccgcccccgggttc
tacccgtactcccagtaccagtacggagaccccgcacgggccaagagcgccacacgcgag
accaccagcacgctgaaagcctggcttcaggagcacaagaagaacccgtatcccactaaa
ggcgaaaagatcatgctggccatcgtgaccaaaatgaccctgacgcaggtgagcacgtgg
tttgccaacgcgcgccgccgcctcaagaaggagaacaaggtgacgtggggacgcagcgcc
gaggacgtagacggctgcggctacgacagcgaccgcgacgacgacgacgagagcgcgcac
aagcacgagcgcgaggaggagatcgacctggagaccgtggacaccgacgaggccgaagag
gaagtgcgcaaagagccgagcgacgccaaggcgcacgagcaaagtgaaacggagagcgaa
agcgcagacacgcgcgcgctaaacagccccgccggctccgtggccgcgagtaaagacgcg
atcgcggggaaaagcggctcagaggacgtttctccgggatgccagaggcctgtgaactcc
aaacccaaaatctggtcgctcgcggaaacagcaacgagtccagataactgccagaaagcg
agcagtctgtcgacggcagtcaccgcgcacccggcttttttatccactaacgggatttac
acgtgtcagatagggaagctgaacagctggactggaggcgcttttctcggtgcaggacct
ctaatcggtgtgcgctctttaatgggagtgagtccgagcagccattacataacctcaagc
gctcagagtgagagtcctacacacagcctcagcctcagtccacaacacaacaccgatcga
gaacatgttcagagaaccgaatctccagcacttcctctgaggccatcatttccggtcatc
cacgacaggtctcaccacgaaacagcacagcgagctctgaagactgtttcctga
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