Ictalurus furcatus (blue catfish): 128616277
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Entry
128616277 CDS
T09387
Symbol
thbs3b
Name
(RefSeq) thrombospondin-3b
KO
K04659
thrombospondin 2/3/4/5
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04145
Phagosome
ifu04510
Focal adhesion
ifu04512
ECM-receptor interaction
ifu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128616277 (thbs3b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128616277 (thbs3b)
09144 Cellular community - eukaryotes
04510 Focal adhesion
128616277 (thbs3b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128616277 (thbs3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128616277 (thbs3b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ifu04147
]
128616277 (thbs3b)
00536 Glycosaminoglycan binding proteins [BR:
ifu00536
]
128616277 (thbs3b)
Membrane trafficking [BR:
ifu04131
]
Endocytosis
Phagocytosis
Opsonins
128616277 (thbs3b)
Exosome [BR:
ifu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128616277 (thbs3b)
Exosomal proteins of colorectal cancer cells
128616277 (thbs3b)
Exosomal proteins of bladder cancer cells
128616277 (thbs3b)
Glycosaminoglycan binding proteins [BR:
ifu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
128616277 (thbs3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF
EGF_3
cEGF
Motif
Other DBs
NCBI-GeneID:
128616277
NCBI-ProteinID:
XP_053494830
LinkDB
All DBs
Position
12:25178368..25194818
Genome browser
AA seq
914 aa
AA seq
DB search
MAAAVEDLMGGLEKMKEVYVTSIFRLPPKLGGVLFGIYSRDDGKRYLEITAIGKITKVRY
LRSDGKLHSVNLRNPALSDGRSQSLILRVGGLRQSHISFELYINCRLTDSAHGLPSLARL
PAKVESVEVRSGERNFARMQGSVEALKLALGGSLPKAGLLTDCSLQGDSTLHNTVGSDVN
GILGDHTKALIGQLIIFNQIMGDLREDIREMTKEMSLIRNTILECQVCGFHEPQSRCQSN
PCYDGVACVDVLEFPGYRCSSCPAGTTGNGTHCQDINECAAQPCFSPHMCVNSVKGFRCE
PCPPGFSGPELSGVGMEFAQNHRQECVDVDECAAQTAACVSDSVCINTPGSFQCGQCKAG
FVGNQTSGCFLRRTCAVLGYDPCDVNAHCVLERSSDVSCVCDVGFAGNGNICGVDSDLDG
YPDEALPCIDNDKHCRADNCGATPNSGQEDTDGDGVGDQCDADADGDGIKNMEDNCRLVP
NKDQQNSDTDSYGDACDNCPNVPNGDQRDTDGNGVGDSCDSDIDGDGIPNMLDNCPKIPN
AMQTDRDDDGVGDVCDSCPEVNDPTQSDIDNDLVGDICDTNQDTDGDGLQDTRDNCPEIP
NSSQVDSDNDGIGDDCDDDDDNDGVPDASYPGPDNCRLVPNPNQRDSDADGVGDVCQGDF
DNDKVSDEMDACPENADITMTDFRAFQTVILDPLGDSQIDPNWVVLNQGMEIIQTMNSDP
GLAVGYTAFNGVDFEGTFHVNTMSDDDYVGFIFSYQDSSSFYVVMWKQTEQTYWQNLPFT
AQAEPGLQLKAVKSRTGPGEYLRNALWHTGDTHGEVTLLWKDPRNVGWSDKTSYRWSLSH
RPQVGYIRVRLYEGTALVADSGVVIDSSMKGGRLGVFCFSQENIIWSNLGYRCNDAIPDD
FYLYHRQMNLRTGA
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggtggaggatttgatgggaggtttggagaaaatgaaggaggtgtacgtg
acctctatattccgcctccctccgaaactgggcggcgtgctgttcgggatctacagcaga
gacgacggcaagagatacctggagatcaccgccatcggcaaaatcactaaagtaagatat
ttgcgctctgatgggaagctccactcagtgaacctgcgtaaccccgccctctcggatggg
cggagccagtcactcattctcagagtgggcggactcagacagagccacatcagcttcgag
ctctacattaactgccgcctgaccgattccgcccacgggctgccctcattggccaggctg
cccgcgaaggtggagtcggtggaggtccgtagcggagaaaggaacttcgccaggatgcag
ggttcagtggaggctctaaagctggccctcggtggttctctccctaaagctggtctcctc
actgactgctcactgcagggagactcaacactacacaacacagtgggcagtgacgttaac
ggcatactgggtgatcacactaaggctctgattggtcagctgatcatctttaatcagatc
atgggcgatctgagagaggacatcagggagatgaccaaggagatgtctttaatcaggaac
actattctggagtgccaagtgtgtggtttccatgagcctcagtctcgttgtcagtctaac
ccgtgttatgacggtgtcgcgtgtgtcgatgtgttggagtttccggggtatcggtgcagc
tcgtgtcctgcaggcactacaggcaatggcacacactgccaggacatcaatgagtgtgca
gcacagccgtgtttctctcctcacatgtgtgtgaacagtgttaaggggttccgctgtgag
ccgtgtcctccggggttctccggtcctgagttgagtggagtcggcatggagttcgcccag
aaccacagacaggagtgtgtggacgtagacgagtgtgcggctcagaccgccgcctgcgtc
tccgactccgtctgcatcaacactccgggttcgtttcagtgtggtcagtgtaaagcgggt
tttgtggggaatcagacatcgggctgtttcctcaggaggacgtgcgctgtgctcggatac
gacccgtgcgatgtcaatgctcactgcgtgctggagcgcagcagtgacgtgtcctgtgtg
tgtgacgtgggatttgcggggaacgggaatatctgcggcgtcgactctgacctcgatggc
tatccagacgaagcgcttccctgcatcgataacgataaacactgccgagcggataactgt
ggcgccacgccgaactctggtcaggaggacacggacggtgatggcgtcggagatcagtgt
gacgcggacgcagacggagatggaataaagaacatggaggataattgtcgtctggtgccc
aataaggaccagcagaactccgacacagactcgtacggcgacgcgtgtgataactgtccg
aacgtccctaatggagatcagcgggacacggacggtaacggtgtgggagacagctgtgat
agcgacatcgatggagatggaatccccaacatgctggataactgcccgaaaatccccaat
gccatgcagacagaccgggatgacgacggagtcggagacgtgtgtgacagctgtcctgag
gtcaacgaccccactcagtcggatattgataacgacttggtgggagacatctgcgatacg
aaccaggacacagatggggacggtctccaggacacgagggacaactgtcccgaaatcccc
aacagctctcaggtggactccgataacgacggcatcggggatgattgtgacgacgacgac
gacaacgatggagttccggatgcttcttatcccgggcctgataactgcagactcgtccca
aatcctaaccagagagactcggacgctgacggagtgggtgatgtgtgtcagggcgacttt
gataacgataaagtgagcgacgagatggatgcctgtcccgaaaacgctgacatcaccatg
acggacttccgagccttccagacggtcatcctggacccgctcggggattcccagatcgac
ccgaactgggtggtgctgaatcaggggatggagatcatacagacgatgaacagtgaccct
ggtttggctgtgggctacacggcattcaacggtgttgatttcgagggcacgtttcacgtg
aacacgatgagtgacgatgactacgtgggcttcatcttctcctaccaggactcgtccagc
ttctacgtggtgatgtggaagcagacggagcagacgtactggcaaaacctgccgttcaca
gcacaggctgaacctggtctgcagctgaaggcagtgaagtctcgcaccgggccgggtgag
tatctgcgtaacgcgctgtggcacaccggcgacacacacggagaggtgacgctgctctgg
aaggatccgaggaatgtgggatggagcgataaaacatcgtatcgctggagcctcagccat
cggccgcaggtcggctacatcagagtgcgtctgtatgaaggcactgctctggtcgctgac
tccggtgtggtgattgacagctcgatgaaaggaggacgtctgggtgttttctgcttctca
caggagaacattatctggtccaatctgggttatcgctgtaacgatgcaatcccggatgat
ttttacctctaccacagacagatgaacctcaggacgggagcgtag
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