Ictalurus furcatus (blue catfish): 128616314
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Entry
128616314 CDS
T09387
Symbol
nup85
Name
(RefSeq) nuclear pore complex protein Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128616314 (nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128616314 (nup85)
03036 Chromosome and associated proteins [BR:
ifu03036
]
128616314 (nup85)
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128616314 (nup85)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
128616314 (nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
TPR_19
TPR_14
Motif
Other DBs
NCBI-GeneID:
128616314
NCBI-ProteinID:
XP_053494883
LinkDB
All DBs
Position
12:complement(27329387..27346328)
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AA seq
649 aa
AA seq
DB search
MEELDVEPTTTLIPGAGLKQKHLGFEWGPGDLLMYETNFKLQDSGSGGSGSPFIHVVRRD
EDIYSPILRKLFNESHHIFVGLQNIKDDVPSKNKKLQFVSISKNYRSVIRACMEELQQVA
VSTTDTQYSNQVSILLAIELIWNLCEVLFIDASPAGSLLLHLLDWVRLHKADVDEKAREV
LQSESPTRHHAYWDVVMCFVLQGRMDEARQVLQKQASLQPASRAAYQLMDNLLHKMPVFN
PGGTQTLTEFDVKWRHWHEECDRCLQDNSFASNRHLETICKVLVGDEDALLEQKVLLGTW
YHLLISRLLFSHPTVKPAELHYYAQSSMDMFLESPSASEPLDSILLAAFEFDLHQVIKDC
SIALNNWWFVAHLTDLLDHCKLLQSHNLHFGSNLREFLVLEYASGLFSHHSLWQLAVDYF
DHCPEFGRVYLELQIERVPLETERKALKVLRICEQRQMNEQVRSICKIMAKRALSNNRLG
SALSWSIRAKDAAFATLISERFLQDYCTRGSFSDLDLIDNLGPAMLLSDRLTFLGKYREF
HRLYGEKKFTEAAKLLLSLMTAKIAPRSFWMTLLIDALPLLEQKEVIFSVDQTHELMFCL
EELTSDNSEFKLEHLTQDDDVESTKLELLRLALARNLAMAIVKEGTVEA
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggaggaattagatgtggagccgacaaccacgctgatcccaggcgcaggccttaaacag
aagcacctgggctttgagtggggtcccggagacctgctgatgtacgagaccaactttaaa
ttacaagattctggctctggaggctctggttctcccttcatccacgtggtacgcagagat
gaggacatctactctcccatcctgcgcaagctcttcaacgagtctcatcacatcttcgtc
gggctgcagaacattaaagatgacgttccaagcaagaacaagaaactgcagtttgtgagc
atcagtaagaactacaggtctgtaatacgagcctgtatggaggagctgcagcaggtcgca
gtatcgactacagacacacagtacagcaaccaggtgtccattctcttagccatagaactc
atctggaatctgtgtgaggtgcttttcatcgacgcatcaccagccggctctctgctgctg
cacctgctggactgggtgcgcttacacaaagctgacgtggatgaaaaagcgcgagaggtc
ctgcagagcgaaagccccacacgtcatcatgcgtactgggacgtggtgatgtgttttgtc
ctgcagggccgaatggacgaggctcgacaggttctgcagaaacaggcgtctctacagccg
gcgtccagagccgcgtatcagctcatggacaacctgctgcacaaaatgcccgtgtttaac
cccggtggcactcagaccctcacagagtttgatgtaaagtggaggcactggcatgaggag
tgtgaccgctgtctccaagacaactccttcgctagcaaccgtcacctggaaaccatctgc
aaggtcctggttggtgacgaggacgctctgttggagcagaaagtgctgctgggaacctgg
taccatttactgatcagccgcctgctgttctctcatcccactgttaaacccgctgagctg
cactactacgctcaatcgagtatggacatgttcctggagtctcccagcgcctcagagcct
ctggacagcatcttactggctgcgtttgagttcgaccttcaccaagttattaaagactgc
agcattgccctgaataactggtggtttgtggctcacctgactgacctgctggatcactgc
aaactcctgcagtcgcacaacctccattttggctctaacctgcgggagttcctggtgctg
gagtacgcctccggactcttctctcatcacagtttgtggcagcttgcagtggattatttc
gatcactgccccgagtttggtcgtgtgtatctggagctgcagatcgagagagtgccgctg
gagacggagcgcaaagcgctgaaggtgctgaggatctgtgaacagagacagatgaatgag
caagtgcgtagtatctgtaagatcatggctaaaagggctctcagtaataacagactgggt
tctgctctgtcctggagtatcagagctaaagacgcagcctttgccacacttatctccgag
aggtttctgcaggattactgcacacgtggctcattctctgatctggatctgatcgataat
cttggacctgccatgctcctcagcgacagactcacattccttgggaagtatcgtgagttc
caccggctgtacggagaaaagaagttcaccgaggcggcgaagctcctgctctccctcatg
acagcaaagatagctccacgcagcttctggatgactctgctcatagacgccctgccctta
ctggagcagaaagaggtgatcttttcagtggatcagacccatgaactcatgttctgtctg
gaagagctgacctctgacaacagcgagttcaaactagagcatctcacacaggatgatgat
gttgaatccacaaagctggagctgctgcgattggctctggcacgtaatctggcgatggcc
atagtgaaggagggaacagtcgaggcataa
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