Ictalurus furcatus (blue catfish): 128616603
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Entry
128616603 CDS
T09387
Symbol
trim65
Name
(RefSeq) tripartite motif-containing protein 65
KO
K12031
tripartite motif-containing protein 65
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ifu04121
]
128616603 (trim65)
Ubiquitin system [BR:
ifu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128616603 (trim65)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
PRY
zf-C3HC4_4
zf-C3HC4
RING_XB3-XBAT31
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
zf-B_box
LAMB1
zf-RING_11
AAA_15
Prok-RING_4
IFT57
DUF5129
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
128616603
NCBI-ProteinID:
XP_053495190
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Position
13:complement(22750645..22757789)
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AA seq
520 aa
AA seq
DB search
MEEHSLTCTICLDRFQYPVTIPCGHTFCKKCISTHWDQMEQDGPQNTSFNCPVCKETFSP
RPNLNRNVSLSVLSEVAANSTAERSAGAACSMDRVEDVSEELCPRHQKPLIYYCRKDCMC
VCCVCSLKECKDHDKVLVEEERCNREEALKKKSMEIGKCMEDTEKNIQLLSENITEAKVS
LQQTSQWVSAKFSQLLKVLMEKQEVTQSFLEQQQASTVSQAESRLSNLQEKLKQLGELQE
QISSLCAVPDRQLIQDSRLVEVPQMVSVPVDVSVNLQEKLSPVTDVLSRISKLVCEDLDK
AVYAAVSHIKEGSPQDKRPMLAVVPSPATPPYPAGKQGLIQYRCSLTFDPRTANGHLMLS
QNNQRAEHLTSGPRQVPAHEARFDYTWQVLCFENFTHGRHYWELEVSKPWAYVGVTYPSI
LRKEKGRTSMLGMNELSWSLELNERQLTAWHGSHGEPVKGELQLNKRPLRIGMLLDYEEG
TLAYYGENQVRLHAFHCIFSHELYPACWIGEGVSVTLCPV
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcacagtctgacctgcaccatctgcttggaccgtttccaatacccagtgact
atcccttgtggccacaccttctgcaagaaatgcatatccacacactgggatcagatggag
caagatggacctcagaatacatcattcaactgcccagtttgcaaagagacattctcccct
agacccaatctgaatcggaacgtgtccctgtccgttttgagcgaagtggctgccaacagc
acagcagagagatctgcgggtgcggcgtgtagtatggaccgagtcgaagacgtctccgag
gagctctgtcctcgccatcaaaagcctcttatttactactgcaggaaagattgtatgtgt
gtgtgctgtgtgtgctctttgaaagagtgcaaagaccacgacaaggtgctggtggaagag
gaaaggtgcaaccgtgaggaggcactgaagaagaaaagcatggagatcggaaagtgcatg
gaggatacagagaagaacattcagctactctcagaaaatatcactgaagctaaggtgtcg
ctgcagcagacgtctcagtgggtgagcgccaagttctcacagctgctgaaggtgctgatg
gagaaacaggaagtgacgcagagtttcctggagcagcagcaggccagcacggtgtctcag
gccgagtctcggctcagcaacctgcaggagaaacttaagcagctcggagagcttcaggag
cagatcagcagcctctgtgccgtccccgaccgccagctcattcaggactccaggctggtg
gaggtccctcagatggtttcagttcctgtagacgtcagtgtaaaccttcaggagaagctg
agtccggtcacagacgtcctgtctcgcatctcaaagctggtgtgtgaggatctggataaa
gctgtgtacgcagctgtgagccacatcaaagaaggctctcctcaagacaagagaccaatg
cttgctgttgtgccaagtccagccactccgccttatccagccggaaagcagggcctcatt
caataccgttgttcgttgacctttgaccctcgcacagccaacggtcacctcatgctttct
cagaacaaccagcgagcggagcacctgacctcagggcctcgtcaggtgccagctcacgag
gcgcgtttcgattatacctggcaggtgttgtgctttgagaatttcacacacggtcgccac
tactgggagctggaggtgtccaaaccgtgggcgtacgtaggcgtgacgtacccgagcatc
ctacgcaaggagaaaggcaggacatccatgctgggaatgaacgagctgtcatggagcctg
gagctgaacgagcgccagctcacggcttggcacggcagtcacggagagcctgtaaaaggc
gagctgcagttaaacaaacgccctctgcgtatcggcatgctgctggactatgaggaaggc
actctggcttattacggggagaaccaagtgaggttgcacgccttccactgcatcttttcc
catgagctctatcctgcctgctggatcggagagggggtcagcgtcactctctgcccagtg
tga
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