Ictalurus furcatus (blue catfish): 128616624
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Entry
128616624 CDS
T09387
Name
(RefSeq) integrin alpha-M isoform X1
KO
K06461
integrin alpha M
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04145
Phagosome
ifu04514
Cell adhesion molecules
ifu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128616624
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128616624
09142 Cell motility
04810 Regulation of actin cytoskeleton
128616624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128616624
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ifu04147
]
128616624
04515 Cell adhesion molecules [BR:
ifu04515
]
128616624
04090 CD molecules [BR:
ifu04090
]
128616624
00536 Glycosaminoglycan binding proteins [BR:
ifu00536
]
128616624
Membrane trafficking [BR:
ifu04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
128616624
Exosome [BR:
ifu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128616624
Cell adhesion molecules [BR:
ifu04515
]
Integrins
Integrin alpha subunits
128616624
CD molecules [BR:
ifu04090
]
Proteins
128616624
Glycosaminoglycan binding proteins [BR:
ifu00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
128616624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
ITGAX-like_Ig_3
VWA_2
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
128616624
NCBI-ProteinID:
XP_053495217
LinkDB
All DBs
Position
13:2804836..2839958
Genome browser
AA seq
1139 aa
AA seq
DB search
MTALTMDWNFPVYFFLMSVSWSVMGFNIDPNPWKDFTYNPNTAFGYKVIQKNGFSLIVSD
PLTQSQNERGKVYSCEVAQEKCSPILMNVPSEAVNMSLGLSMTKDPQSSKLVVCGPTIPK
DCKHFTAYSGMCFTLDNNNNPSGPIPSTLRDCPPPSQTDIAFLLDGSGSVSTRDFDIMKD
FVINMVNGLKDRDFQFAVAQYSSKFQIHIKFNSFSSTDQIRGINQIRGGTYTATAIKRVV
AELFTSEAGARENANRVLVVITDGESHDRSELGNAAQDAEQKKITRYAIGVGSAFNSPSA
ENELKTIASDPDDKYVFKVNDFSVLKEIRETLEENIIAIEGTQTSGESTRMEFAQDGFST
DFVSTGDIIMSAVGAFQWKGGYQKYNYRGTPVDSFQKGNSNDSYLGYSMTVAKTPRKSYI
IIQGAPRDKHMGKVIMSDNEGNPIQTLDPPEPQIGAYYGAELCVVDLDLNSVTDLLLVSA
PLHHEGDQEGKVFVYTFDESKVNHIQTLKGIPGQRGRFGLTMASPADLNGDRLVDVVVGA
PLEENGQGSIYIFNGRKADISTTFSQRIRGSSVRTGIKFFGFSLSQTALDHSEDQLPDLA
VGSKGSVILLRSRPIVSLWNTVTYNPSKIPTRDTECTSPLKNTLQLCFTMTGLNTGTKDL
TANINYTIKLDAKRQSYRAYFSPKNRVLIGTISVSLQEKCNQHEFFIEACPNDALNPISN
ELVYTFEGLPSPKLKNLRPILPPNMRNTSDHNLDFEINCGTDNVCIDNLKVDLNFSGYSV
IQVGIMQDMNVTVFVENRGENSYNSRVILKYPFGLSFRRFTTKQGRLECVSVDSDEKAAL
GETTCLISKPIFKNNGLAIFDVTYNINKDSNFDRMVMFTASASSDNDRHAPDNELFKNKT
IDVKYAIYIALIRHENSTIHINFTSGKNDLAKPVHQVFKVENDLRDLSVNIFIRVPIKLG
VKDIWTNNNLQIQGCNTDKDESPTIHDFVAALQKQPDVNCSVAVCRVFKCPENLIRKQTK
FYTISGNISSGWIEQTGLRSAVFELVSTATLDYNKTTYIYFSDSVNTAPTGKINTQVEVY
EEKFPLKETIGGVVGGLVLLALITAGLYKAGFFKSNYQKMLEEAGAEGAGEGTNALNQE
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgacagcattgacaatggactggaatttcccagtgtactttttcctgatgtctgtatct
tggtcagtgatgggtttcaacattgatccaaatccatggaaagatttcacctacaaccca
aacacagccttcggctacaaagtgatacagaaaaacggcttcagtttgattgtgagtgat
cccttaacccaaagtcagaatgaaagagggaaagtgtacagctgtgaggttgcacaagaa
aaatgctcaccaatactaatgaatgtgccttctgaggctgtcaacatgtcccttggactt
tcaatgactaaagatccccagtcttcaaagctagtggtctgtggtccaacaattcccaag
gactgtaagcactttactgcctacagtggcatgtgttttacattggataacaacaataat
ccatcaggacctataccaagtactttgagagattgcccgcctccatcacaaacagacatt
gctttcttgttggatggctctggcagtgtaagcactcgggattttgatataatgaaggat
tttgttataaacatggttaacggcttaaaagacagggattttcagtttgcagtggcacaa
tattcttcaaaatttcaaatacacataaaattcaacagcttttcaagcactgatcaaata
agagggatcaaccagattaggggtggtacctacactgctactgctatcaaaagagttgta
gctgaattatttaccagtgaggcaggagccagagaaaatgctaacagagtgttggtggtc
atcactgatggtgaatcacatgaccgcagtgagctgggaaatgctgctcaggatgcagag
cagaagaaaattactcgctatgctataggggtcggtagtgccttcaacagcccatcagca
gagaatgagttgaaaactattgcatcggatccagatgataaatatgtatttaaagtgaat
gacttttctgtattaaaggaaattcgagagacactggaagagaatatcattgcaattgag
ggaacccagacttcaggagaatccaccaggatggaatttgcacaggatggcttcagcaca
gactttgtgtcaactggtgacataataatgagtgcagttggagcgtttcagtggaaaggc
ggttatcagaagtacaattacagaggaacacctgtagactcctttcagaagggcaacagt
aatgacagttatttaggttattccatgacagtagcaaaaacacccaggaagtcctacatc
atcattcagggagctccaagagataagcacatggggaaagtgatcatgtcagacaatgaa
ggcaatcctattcagacactggatcctcctgagcctcaaattggtgcctattatggtgct
gagttatgtgtggtggacttggatttgaacagcgtcacagaccttctacttgtttctgct
ccactgcatcatgagggagatcaggaaggaaaagtcttcgtctacacctttgatgagtcc
aaggtaaatcacatacagacactgaaaggaattccaggacaaagggggaggtttggcctg
acgatggccagccctgcagatctaaatggggacagactggtggatgtagtggtaggagca
cctctagaggagaatggccagggcagcatctacatctttaatggaagaaaggcagacatt
tccaccaccttctcacagagaatcagaggctcgtctgtgcgcactgggataaaatttttt
ggtttttctctgagtcaaactgctctggaccatagtgaagaccagctgccagatcttgct
gtcggttccaaaggatcagtcatacttttaagatcaagacccatcgtgagcttgtggaac
acagtaacttacaacccgtccaaaatccccaccagagacaccgagtgcacgagtcctttg
aaaaacacactacaattgtgtttcactatgacagggttaaataccggcacaaaagacttg
actgcaaatataaactatacaataaaacttgatgccaaacgacaaagctaccgggcctac
ttttcaccgaagaaccgtgttctaattggcacgatatctgtgtcactgcaggagaagtgc
aatcagcatgaattttttatagaggcctgccccaatgatgcactcaacccaatatctaat
gagttagtgtatacttttgagggtctccctagtccaaaactgaaaaatttacggccgatt
ctgcctcctaacatgaggaacacctcagatcataatctggattttgaaataaactgtgga
accgataatgtctgcattgataatctcaaagtggatttgaacttttctggatactcagtc
atacaagttggaataatgcaggatatgaatgtgactgtcttcgtagagaacagaggggaa
aattcctacaacagtcgagtaattctcaaatacccgtttggactttccttcaggagattc
actactaaacagggcagactggagtgtgtatctgtggatagtgatgaaaaagctgcactg
ggggagacgacttgtttaatcagtaaacccatcttcaagaataatggcttggctatcttc
gatgttacatataacataaacaaagacagtaactttgacaggatggtgatgttcactgca
tctgcttccagtgacaatgacagacatgcacctgacaatgaactattcaaaaacaaaacc
attgatgttaaatatgccatctacattgcattgatcaggcatgagaattccactatccac
attaattttacttccgggaaaaatgaccttgcgaaaccagtccaccaagtattcaaggtg
gagaatgacctcagggatttgagtgtcaacattttcatcagagtacccataaaattagga
gttaaggacatctggactaataacaacttgcagattcaaggctgcaatacagacaaagat
gagtcgccaacaatccatgattttgtggcagctctgcaaaaacaacctgatgtgaattgc
tccgtagctgtgtgcagagtgtttaaatgtcctgaaaatctcattagaaagcagacaaaa
ttctacaccatctctggtaatatcagctctggatggattgaacagaccggattgcgatca
gcagtgttcgagctggtcagtacagcaacactggactataacaaaacgacatatatctac
ttctctgattctgtaaacactgcacccactggcaagattaatacccaggtggaggtgtat
gaggagaaattcccacttaaggagacaattggaggtgttgtaggaggtcttgtgcttctg
gctcttatcactgcaggcctctacaaggctgggttctttaaaagcaactatcagaagatg
ttggaggaagcaggggctgagggagctggagaaggcacaaacgctctaaatcaagagtga
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integrated database retrieval system
