Ictalurus furcatus (blue catfish): 128616625
Help
Entry
128616625 CDS
T09387
Name
(RefSeq) integrin alpha-M-like
KO
K06461
integrin alpha M
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04145
Phagosome
ifu04514
Cell adhesion molecule (CAM) interaction
ifu04517
IgSF CAM signaling
ifu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
128616625
04517 IgSF CAM signaling
128616625
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128616625
09142 Cell motility
04810 Regulation of actin cytoskeleton
128616625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128616625
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ifu04147
]
128616625
04515 Cell adhesion molecules [BR:
ifu04515
]
128616625
04090 CD molecules [BR:
ifu04090
]
128616625
00536 Glycosaminoglycan binding proteins [BR:
ifu00536
]
128616625
Membrane trafficking [BR:
ifu04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
128616625
Exosome [BR:
ifu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128616625
Cell adhesion molecules [BR:
ifu04515
]
Integrins
Integrin alpha subunits
128616625
CD molecules [BR:
ifu04090
]
Proteins
128616625
Glycosaminoglycan binding proteins [BR:
ifu00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
128616625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
ITGAX-like_Ig_3
FG-GAP
Integrin_A_Ig_1
VWA_2
Integrin_A_Ig_2
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
128616625
NCBI-ProteinID:
XP_053495219
LinkDB
All DBs
Position
13:2843361..2888962
Genome browser
AA seq
1154 aa
AA seq
DB search
MHVFGLGRKPEYLEETPAARGEQTSWQESNPQLWRLSWSVMAFNIDPNPWKDFTQNQSTA
FGYKVIQKNSLSLIVSDPLTQSRNERGKVYSCEVAQEKCSQIPMNVPSEAVNMSLGLSMT
KDPQSSRLVVCGPTIPKDCKHFTAYNGMCFTLDNNNNQSGPIPSTLRDCPQTDIAFLLDG
SGSISQQDFTTMKNFVINMVNGLKDWDFQFAVAQYSSKFQIHIKFNSFSSTDQISGINQF
GGGTYTATAIKRVVAELFTSEAGARENANRVLVVITDGESHDRSELGNAAQNAEQKKITR
YAIGVGSAFSYPSAENELKTIASDPDDKHVFKVNDFSVLTEIRDTLKENIIAIEGTQTSG
ESTRMEFAQDGFSADFVSNSIIMSAVGAFQWKGGYQKYNYSRAPVDSFQKGNSNDSYLGY
SMTVAKINLQQYIIQGAPRDTHMGKVIITGNKVFQTLDPPEPQIGAYYGAELCVADLDLN
NFTDLLLVSAPLHNEGDHEGKVVVYTFTTSMFQTLQVNHIQTLKGIPGQRGRFGLTLASP
ADLNGDGLADIVVGAPLEENGQGSIYIFNGRTEDIVPTFSQRIRGSSVRPGLQFFGVSLS
QSALDHSEDQLPDLAVGSKGAVILLRSRPIVRLWNTVTYNPSKIPTNDTECTSPLNNTVK
LCFTMTGLNTGTKDLTANINYTLKLDAKRQSYRAYFSPKNRVLIGTISVSLEEKCNQHEF
LIEACPNDALNPISNELVYTFEGLPTQKLNNLRPMLPPNTKNTSDHNLDFEINCGTDNIC
IDNLKVDFNFSGYSVIQVGIMQDMNVTVFIENRGENSYNSRVILKYPFGLSFRRFITKQG
RLECVSVDSDEKAALGETTCFISKPIFKNNGLAIFDVTYNINKDSNFDRMLTFTASVSSD
NDKHAPDNELLKNKTIDVKFAIYIALIRHENSTIHINFTAGKNDLEKPVHQIFKVENELR
DLSVDLFIRVPIKLGVKDIWTNNSLQIQDCNADNDEQPTIRDFVAALHKQPEVNCSVAVC
RVFKCPANLIRKQTKFYTISGNVSSGWIEQTGLRSAVFELVSTATLDYNKTTYIYFSDSV
NTAPTGKINTQVEVYEEKFPLKETIGGVVGGLVLLALITAGLYKAGFFKSNYKKMLEEAR
ARAKGTGEGTGVSK
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtctttggattgggaaggaaaccggagtacctggaggaaaccccggcagcacgg
ggagaacaaacatcatggcaggaatcaaaccctcaactctggagattatcttggtcagtg
atggctttcaacattgatccaaatccatggaaagatttcacccaaaatcaaagcacagcc
ttcggttacaaagtgatacagaaaaacagcttgagtttgattgtgagtgatcccttaacc
caaagtcggaatgaaagagggaaagtgtacagctgtgaggttgcacaagaaaaatgctca
caaataccaatgaatgtgccttctgaggctgtcaacatgtcccttggactttcaatgact
aaagatccccagtcttcaaggctagtggtctgtggcccaacaattcccaaggactgtaag
cactttactgcctacaatggcatgtgttttacattggataacaacaataatcaatcagga
cctataccaagtactttgagagattgcccacaaacagacattgctttcttgttggatggc
tctggaagtataagccaacaggatttcactacaatgaagaattttgttataaacatggtt
aacggcttaaaagactgggattttcagtttgcagtggcacaatattcttcaaaatttcaa
atacacataaaattcaacagcttttcaagcactgatcaaataagtgggatcaaccagttt
gggggtggtacctacactgctactgctatcaaaagagttgtagctgaattatttaccagt
gaggcaggggccagagaaaatgctaacagagtgttggtggtcatcactgatggtgaatca
catgaccgcagtgagctgggaaatgctgctcagaatgcagagcagaagaaaattactcgc
tatgctataggggtcggtagtgcctttagctacccatcagcagagaatgagttgaaaact
attgcatcggatccagatgataaacatgtgtttaaagtgaatgacttttctgtattgacg
gaaattcgagacacactgaaagagaatatcattgcaattgagggaacccagacttcagga
gaatccaccaggatggaatttgcacaggatggcttcagtgcagactttgtttcaaatagt
ataataatgagtgcagttggagcgtttcagtggaaaggcggttatcagaagtacaattac
agcagagcacctgtagactcctttcagaagggcaacagtaatgacagctatttaggttat
tccatgacagtagcaaaaataaacttgcagcagtacatcattcagggagctccaagagat
acgcacatggggaaagtgatcataactggcaataaagtctttcagacactggatcctcct
gagcctcaaattggtgcctattatggtgctgagttatgtgtggcggacttggatttgaac
aacttcacagaccttctacttgtttctgctccactgcataatgagggagatcatgaagga
aaagtcgtggtctacacctttacaacatccatgttccagactttacaggtaaatcacata
cagacactgaaaggaattccaggacaaagggggaggtttggcctgacgttggccagccct
gcagatctaaatggggacggtctggcggatatagtggtaggagcacctctagaggagaat
ggccagggcagcatctacatctttaatggaagaacagaagacattgtccccaccttctca
cagagaatcagaggctcgtctgtgcgccctgggctgcaattttttggtgtttctctgagt
caatctgctctggaccatagtgaagaccagctgccagatcttgctgtcggttccaaagga
gcagtcatacttttaagatcgagacccatcgtgcgcttgtggaacacagtaacttacaat
ccatccaaaatccccaccaatgacactgagtgcacgagtcctttgaataacacagtaaaa
ttgtgtttcactatgacaggattaaatactggcacaaaagacttgactgcaaatataaac
tatacattaaaacttgatgccaaacgacaaagctaccgggcctacttttcaccgaagaac
cgtgttctaattggcacgatatctgtgtcgctggaggagaagtgcaatcagcatgaattt
ttgatagaggcctgccccaatgatgcactcaacccaatatctaatgagttagtgtataca
tttgagggtctccctactcaaaaacttaacaatttacggccgatgctgcctcctaacaca
aagaacacctcagatcataatctggattttgaaataaactgtggaaccgataacatctgc
attgataatctcaaagtggattttaacttttctggatactcagtcatacaagttggaata
atgcaggatatgaatgtgactgtcttcatagagaacagaggggaaaattcctacaacagt
cgagtaattctgaaatacccgtttggactttccttcaggagattcattactaaacagggc
agactggagtgtgtatctgtggatagtgatgaaaaagctgcactgggggagacgacttgt
ttcatcagtaaacctatcttcaagaacaatggcttggctatcttcgatgttacatataac
ataaacaaagacagtaactttgacaggatgttgacgttcactgcatctgtttccagtgac
aatgacaaacatgcacctgacaatgaactattaaaaaacaaaaccattgatgttaaattt
gccatctacattgcgttgatcaggcacgagaattccactatccacattaattttacggca
gggaaaaatgaccttgagaaaccagtccaccaaatattcaaggtggagaatgagctcaga
gatttgagtgtcgaccttttcatcagagtacccataaaattaggagttaaggacatctgg
actaataacagcttgcagattcaagactgcaatgcagacaatgatgagcaacccacaatc
cgagattttgtggcagctctgcataaacagcctgaggtgaattgctccgtagctgtgtgc
agagtgtttaaatgtcctgcaaatctcattagaaagcagacaaaattctacaccatctct
ggtaatgtcagctctggatggattgaacagaccggattgcgatcagcagtgttcgagctg
gtcagtacagcaacactggactataacaaaacgacatatatctacttctctgattctgta
aacactgcacccactggcaagattaatacccaggtggaggtgtatgaggagaaattccca
cttaaggagacaattggaggtgttgtaggaggtcttgtgcttctggctcttatcactgca
ggcctctacaaggctgggttctttaaaagcaactataagaagatgttggaggaagccaga
gcaagggctaaaggaaccggagaaggcacaggggtatctaagtga
DBGET
integrated database retrieval system
