Ictalurus furcatus (blue catfish): 128616638
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Entry
128616638 CDS
T09387
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ifu01002
]
128616638 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ifu04121
]
128616638 (usp42)
Enzymes [BR:
ifu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128616638 (usp42)
Peptidases and inhibitors [BR:
ifu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
128616638 (usp42)
Ubiquitin system [BR:
ifu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128616638 (usp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
128616638
NCBI-ProteinID:
XP_053495245
LinkDB
All DBs
Position
13:complement(11531407..11544420)
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AA seq
1136 aa
AA seq
DB search
MTIVDKASEKSDFESAQCKHSSSLTPVSSGGVDNGSSSWSVDSSTAELSRAMATCVEVAV
YGGTTTLPAERTNEQVAMSFGDGITLPQKVLFPSERLSLKWTQVHRIGAGLQNLGNTCFL
NSALQCLSYTAPLANYMLSREHSKTCHEPGFCMLCTMQNHITQVFANSGNAIKPLGVLHE
LKRIAKHFRCGNQEDAHEFLRYTVDAMQKACLPSNKLDRQTQATTLIHQIFGGYLRSRVK
CGNCKAVSDTFDPYLDIALDIKNAPTITKALEQFVKAEQLDWENAYKCSTCKEMVQASKR
LSIHRNSNVLTISLKRFANFSGGKISKDVRYSEYLDLRPYMSQSHGESQIYGLYAVLVHS
GFSCYAGHYYSYVKASNGQWYQMNDSSVTPTDIRSVLNQQAYLLFYIKHGSTDLKSGDST
QMGFTPGHSSPRPVVTPKLNGHSYTSSSIIGPQLPPHMLKNNSYVNGTGSSKEHYSGSKP
SSSDVSGVNKAASNLSHSSISSSVSQQPVQPTGIPEPQKRPKMSFVVGYGKVVRCNRTPS
TSNSSASNSHPQSSSSTSKFQRSKQVNGTSSYRSATFLVPYDEESSEESDQESRVMDNGT
AKPYGVAKAASGDGGMHSPHSHSSSSLLPEKNRSNSLSESLTGANGSGHGPLNGYHKVNG
FKHPDKASDSPTSESSVSDTNSLDSQSASSSKSESLLSSTPSTERAKPLTDPFTKPVSHP
VPAPGADTQTLAKPAEVTPSTQAALTEASSQVKATAESTLSNHSLTQQASDELASSNKPK
VETESVNGTNGKDDVKTCQSDKPSSWEGKSHQEHDRDLKQPHVSPAAKDRDKDKESHRNY
RELQDRSRERYGHGHRPEREYYPRKDRSRSHHRDKEGARCRDRYAYHRRDHHYKRGRSRD
WERDRRYQSLHCSSNRYYRELAWRRAREDSHDRWHYNGEQSSNRAKPSSPRSTSPSPRHR
TRKLILSGEDSTSEERRAKKYKKSKKKNKDKHRSLERDVSDKAQDSSSSLHKKKKKKKRR
REAEDGARRERQSTLSSDKRDWNGEERRSHKCRRSSDRDGSPHRAKLSCTEDHRQLNGLL
AGDGVNRYNGYVQGFCHKEMDAPVKYGDLNHTSSNKNGKIFLCGGDNGETGPVPCR
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgactatagttgacaaagcttcagagaaatctgactttgagtcagcgcagtgcaagcac
tccagctccctgactcctgtctcctctggaggcgtggacaacggcagctccagctggagt
gtcgactcttctacagccgagctttccagggccatggctacgtgtgttgaagttgctgtg
tatggaggcactacaacacttcctgctgagaggacaaatgagcaagtggccatgagtttt
ggcgatggcatcactctgccccaaaaggtcctgtttccatcagagcgtctcagcttgaaa
tggacccaagtccatcgtattggagcaggcctccagaacctgggcaacacatgtttcctg
aattcagctcttcagtgtctttcatacactgcacctcttgccaactacatgttgtccaga
gagcattccaaaacatgtcatgagcctggattttgcatgctgtgtaccatgcagaatcac
atcacccaggtgtttgctaattcggggaatgccattaagccccttggagtgttgcatgaa
ctaaaacggattgcaaagcatttccggtgtgggaatcaagaggatgcccacgagttcttg
cggtacacagtggatgctatgcaaaaggcctgtctgccttccaataaacttgacaggcaa
acacaggccactactctgatccatcagatatttggaggatatttgaggtccagagtaaag
tgtgggaactgcaaagcagtatcagacacctttgatccttatttggatattgcactggat
atcaagaatgccccaactattaccaaggctcttgagcagtttgttaaggctgaacagttg
gattgggagaacgcctacaagtgcagcacttgtaaggaaatggtgcaagcctcaaaaaga
ttaagcattcaccgcaactccaatgtgctcaccatctctctgaaacgctttgccaacttc
agtggaggcaaaatctccaaggatgtgagatactctgagtatcttgacttgcggccctac
atgtctcagtctcacggagagtcgcagatttacgggctgtatgctgttctggtgcactca
ggcttcagctgctatgccggacactactactcctacgtaaaagcaagtaatggtcagtgg
tatcagatgaatgattcatcagtgactcccactgatatacgatctgtgctgaaccaacaa
gcatacctgctgttctacatcaagcacgggtctacagacctgaaaagtggagattcaacc
cagatgggttttactccaggccactcatccccacgaccagttgtaacacccaagctaaac
gggcattcttatacctcctcatcaataattggaccacaactccctcctcacatgttaaag
aataactcgtatgtcaacggaactggttcctcaaaggagcattacagtggctcaaagcca
agcagcagtgacgttagcggagtgaacaaagccgcctccaatttgtcgcactcttccata
tcatcctccgtttctcaacaacccgtccagcccacgggcatcccagagccacagaagagg
cccaagatgagctttgtcgtcggctacggaaaggtggtgcggtgcaaccggactccatca
acctccaacagctcagccagtaattcacacccacagtcctcatcctctacctcaaaattc
cagcgctccaagcaggtcaacggcacatcctcgtatcgcagtgctactttcctggttcct
tacgacgaggaatcgtctgaggagtctgaccaggagagtagagtcatggacaatggtacg
gctaagccttatggcgttgccaaggcagccagtggggacggaggcatgcacagccctcac
tctcatagttcaagctcactcttgcccgaaaaaaacagatctaacagcttgtcagagtct
ctcactggtgcaaatgggtcaggacatggccccctgaatggctatcacaaagtcaacggc
ttcaaacatcctgacaaggcatcagacagtccaacttctgaatcgtccgtaagcgacact
aacagtttggattctcagagtgcgtcaagctccaagtcagagagcctcctctcctcaaca
ccctccacggaaagggctaaaccactcactgatccgttcactaagcctgtctcgcaccca
gtacccgcacctggcgcagacacccagacactggctaagccagcagaagtgacgcctagc
acacaggcagccttaacagaggcatcaagtcaagtgaaggccacagcagagtccactctg
agcaatcacagtctcacccagcaggcaagtgatgaacttgcatcgtcaaacaaacccaag
gtggagacggagtctgtaaacggcacgaatggcaaagacgacgtgaaaacatgtcagtca
gacaaacccagctcttgggaaggaaaaagccaccaagagcacgatagagatttaaagcag
ccacatgtttctcctgccgcaaaggacagagataaagacaaggagagtcatcgaaactac
agagagctccaggacaggagcagagaacgttatggacatggccatcggccagagagagag
tattatccacgtaaggatcgctcccgcagtcaccacagagataaagagggagctcggtgc
cgagacagatatgcgtaccaccgccgagaccaccattacaaaagaggccggtcgcgggat
tgggagcgggacaggagataccagtccttgcactgctcttcaaaccgctattatagagag
ctggcctggcgccgtgcacgcgaagacagtcatgatcggtggcactacaatggagagcag
agcagcaatagagcaaagccctcctctccacgttccaccagcccctcgccccggcacagg
accagaaaactcatcttgtcaggcgaagacagcacgtctgaggagcgcagggccaagaaa
tacaaaaaatctaagaagaaaaataaagataagcacaggagtttggaaagggacgtgtcc
gacaaggcccaggacagcagctccagcctacacaaaaagaagaaaaagaagaagaggagg
cgcgaggcggaggacggagctcgcagggagagacagtccaccctcagctcagacaagcgt
gattggaatggcgaagagaggagaagccataagtgccggcgcagctctgaccgagatggt
tctcctcaccgtgccaagctgtcatgcactgaggaccatcgccagctcaacggtctcttg
gcaggtgatggcgtaaaccgttacaacggatatgtccaaggattctgtcataaagaaatg
gatgcaccggttaaatatggagacctgaaccatacttcctctaacaaaaatgggaagata
ttcttatgtggaggagacaatggagagacaggccccgtgccatgcagataa
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