Ictalurus furcatus (blue catfish): 128616829
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Entry
128616829 CDS
T09387
Symbol
jmjd1cb
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ifu03036
]
128616829 (jmjd1cb)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
128616829 (jmjd1cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
DUF7030
JmjC
FYVE
zf-C5HC2
C1_2
Motif
Other DBs
NCBI-GeneID:
128616829
NCBI-ProteinID:
XP_053495628
LinkDB
All DBs
Position
13:complement(9003898..9148116)
Genome browser
AA seq
2588 aa
AA seq
DB search
MAAAAAAVVEARPELVGKRFLCVSGEAPPELAEIARWPWRAGVIRAVSHRDTDNPELTVY
VEFDDLEWEKREWVKVYEDFQIFLLEQQLVWAKRKEGSQLQGTRAKQIQWPALTFKPLVG
KSVLGSITAVEFFSDRQLDFLTDDGACQPYQDEVDSLSPVLRDNPQLHEEVKGWVKDQKV
QEIFMQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFSRTMVVMNDQVLEPQNVDPSMV
QMTFLDNVVHSLLKGENIGITSRRRSRSSQNSNTAHQTTGGRPSGNTGSTQGHYTRAQAN
SPRPVMNSSGSATKQGPQAQQQQSQHAQQQVSQQHQQQLQSSPGQQRGSRSSRRKGSDSS
IPDDEKIKEEKMDSGGGRGDVSRNKSKQMVSKRRKAEDEEKKAGLKRIKMEASDLSESSD
SENSNKRLLDSSSEPSSENELKSKGISKANEEEDKSQSCNALEESEANSRVSPWEEVSKV
EKIVKPTAMEVVPSAKTEQTGGRRSPVQPSPLPPPSPCAQPQSLGPAEVQGCIVEIKSTV
KTLPKDHYSTGAPRTHTPKCVIDITEDSGSHPATRENSEAVSALLASQKRETYVPEARHL
VLNPSASECRKPEGELQQQRGQSLGSKIEFAQSEVIRPVASVSESAAVAEREREKVQQQY
PSIMPCIKNASLAEDVRKPQKLSSSPDVAKSKSNPSPDTFKPKCNPSPDAMKSKTHSVLE
AMKPKPNTSPEVTKHKGRHTDNPPSSVGRLAAKPDTETPRSSFKPVPARTTPSESTKSPL
IVDKNEHFTVYRDPALVRPEAETNHVTYLPPHLHPLHSSSHATCLTPSSHHHSHLLPASS
LSPHPSVHHPLLPTVLPAMPPTSLLGGHSRLDSSGLSHLALAHHHPHQQQQFLQQQPPPQ
LLTQTHGGASYNQLGLYPIIWQYHNGTQHSYPPGLSLPGSKWVHPENAVNSDGSLPRNTS
SPWLHQPTPVTSADSLGILSHVPGRPASADPHRPLKISSHSSPPLSKTSADLHKGELESK
VFVDPMRGLVTAHLKQEPDRSRTPNSKELQRLYMDSSHMKQQTQPPRLPLDTSDRTVKYK
EENRRILQESIEVAPFTAKIRSGEPEREPYARIPSLPINGPPKENEHSPSDLYKYKHSAA
QSLPQSNYFTTLSNSVVNEPPRLYPSKELNSLSLSSPLPLGSYTSGGGSAKSLSKPPPLI
KHQPEGEGLVGKISEQLSQQVALNPLTTPAAASERRSPAISPSNQLRSMPALHRAPVFHP
PTQQTLDRKEAVYGRLSPPTLTPIQPVSVAGKVSEQQKPPTLLPELREVKSNVELGSSEP
WRASSDSQSHDKVAQWHSDKSQGKPQAATASVIVRSRTCIKYDCSPGPKSGAKEMSGSRP
HTGKNQLDCTKLAETREPGRVIQQNTNREDIFLQYKKNFVRVSQGSFPSSAVAVVNSVCN
SSTDVTTSASAASTYNVLSRGTAELHYPTSATPSSSNINRLEGPVPKCRTPTGPELQECN
ARTASPSGQLPQPGLAPVPQPYSGNFIHLKKHKAALAAAQSRGSSSASESESSSRSSQES
PTITTQDRASPGNPASKASPLPNGQPSQMNQPNYHKLKKAWLTRHSEEDRNTNKVEKTSS
AVSEIIKPCTVNLVASTSSDVEIGKDGKCLEDKMSQEDRKPRRGPSKRPHESCSDSGDDS
DGSDSKHEQRAKRQPKPTYKKKQNDMQKKKGENDKDEDDVKPNGIFRSAKEKTKLKLASS
NGIPRSVLKDWRKVKKLKQTGESFLQDDSCSEIGPNLQKCRECRSIRTKKGEEPTHSPVF
CRFYYFRRLSYSKNGVIRIDGFSSPDQHDEEALSLWAPDAYEENDLDVETSKYILSYIGD
KFCQLVMSEKTAATWIKKDAKIAWKRAVRGVRESCDACEATLFNIHWVCQKCGFVVCLDC
YKAKEKKNSKDKELYAWLKCVKGQPHDHKHLMPTQIIPGTVLTDLVNAMHTLREKFGIKA
HCACASKQNILNKLPCTNGVSQVLQNVLNHSNKLSLCKPEAGQHNLGPKVEANGGSSPAS
DTSTDSKLTPPESQSPLHFLADLAEQKSREEKKENKESAVGKVKEESTDALETLHCKASS
LVANSTEQGSTLRDLLTTTAGKLRLGSTDAGIAFAPVYSTASQTGKSGRTMPNILDDIIA
SVVENKIPADRNTKQSPKAKPQEEARAERRKQAEDVPEQHADIPHCWLYDRRLLWLKDHR
NSNNWKLFRECWKQGQPVLVSGVHRKLNASLWKAEAFSQEFADHQGDLLNCKDGVVSNSG
IKEFWDGFEDLTKRPKSRDGEAIVYRLKDWPSGEEFMALMPSRYDDLMKNLPLPEYSDPE
GNLNLASHLPSFFVRPDLGPRLCCAYGVASSQEQDFGTANLHMEVSDVVSVLVYVGVAKG
NGVLSKTGVLKRLEEEDLDDNVKKRLKDSSETPGALWHVYASRDVEKVQEFLHKISKEQG
VEIPPEHDPVREPGWYLSRKQRQRLLEEHGIQGSTIVQFLGDSVLVPAGALHQVQNLHSC
VQVINDFVSPEHVVHSFHLTQELRSSKEEINYEDKLQVKNIFYHCVKDAVGTLKQCSAEA
QEEEEVNS
NT seq
7767 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcggcggcggttgtggaagcgcggccggagctggtggggaagcggttc
ctgtgcgtgagcggagaggcgccgccggagctcgcggagatcgcgcgctggccgtggcgt
gccggggtcatccgcgccgtgagccaccgcgacaccgacaaccccgaactcacggtatac
gtggagtttgatgacctggagtgggagaagcgcgagtgggtgaaggtgtacgaggacttc
cagatctttcttctggagcagcagctcgtctgggctaagaggaaagaaggctctcagctg
cagggcacccgggccaaacagatccagtggcctgctctgacattcaagcctctggtagga
aagagcgttctgggctccatcaccgctgtggaattcttctccgacagacagctggacttc
ctgaccgatgacggagcatgccagccctatcaggatgaagtggacagcttgagtcctgtt
ctcagggacaatccacagcttcatgaagaagtgaaaggctgggtaaaagaccaaaaggtg
caggaaatttttatgcaaggtccctattctttaaatggataccgcgtacgagtttacagg
caagactcagccacccagtggttcacgggcatcattactcatcacgacctcttcagccgc
actatggttgtgatgaacgaccaggtactagagcctcagaacgttgatccctctatggta
cagatgacctttctggacaatgtggtccattctttgctgaaaggagaaaatataggcatc
acatccagaaggagatcacgctctagccagaatagcaacactgcccaccagaccacagga
gggagaccaagtggcaacacaggaagcactcagggtcattacacacgtgcccaggccaac
agtcccagaccggtgatgaactcatcaggctccgccaccaagcagggtccacaggcccag
cagcaacagtcccagcatgctcagcagcaggtatcccagcagcaccagcagcagctgcag
tcatcaccagggcaacagcgtgggtcccggtcatcacgtaggaagggatcagacagcagc
atccccgatgacgagaagatcaaagaggaaaagatggactctggagggggaagaggagat
gtttcaaggaacaaatcaaaacagatggtgagcaagcggaggaaagctgaggacgaggag
aagaaggctggccttaaacggataaagatggaggcatctgatctttcagagagcagtgac
tctgagaactccaataagaggctcctggactcatcctcagagccaagctctgaaaatgaa
ctgaaaagtaagggcatttcaaaagccaacgaggaagaggacaagtcccagagctgcaat
gctctggaggagtcggaggccaatagcagggtgtctccctgggaggaggtatctaaggtg
gaaaagattgtcaagccgacagccatggaagtggttccctctgccaagactgaacaaaca
ggggggaggaggtccccggtgcagccttccccactgccccctcccagcccctgtgcacag
cctcagagcttgggtcctgctgaggttcaggggtgcattgtggaaataaaaagcactgtg
aaaactctgcccaaggaccattatagcacaggggcacctagaacacacacaccaaagtgt
gtgattgacatcacagaggactccggctcccaccccgccaccagagagaactcagaggct
gtatctgcccttttggcctctcagaaacgtgaaacctatgtccctgaagccagacatttg
gtgctaaacccttcagcctctgaatgcaggaaaccagagggcgagctgcagcagcagcga
ggtcagagtttgggtagcaagattgagtttgcccagtctgaggtgatccgacctgtggct
tcagtaagcgagtcagccgctgtggcagaaagggaaagagaaaaagtacagcagcagtac
ccttcaatcatgccttgcatcaagaacgcctcactcgctgaagacgtgcgaaagccacag
aaacttagctcatcaccagacgtggccaaatccaagtccaacccttcacctgatacattt
aagcccaagtgcaatccctcacctgacgccatgaagtcgaaaacccacagtgtcctggag
gccatgaagcctaaaccaaacacttcccctgaagtgaccaaacacaaaggacgacacacc
gacaaccctccatcctctgttggccggttggcagccaagccagacacagaaaccccacgc
tccagcttcaagcctgttcctgctcgcactactccctctgagtccaccaagagccctctc
atcgtcgacaaaaacgagcacttcacagtgtatcgtgacccggcactggtgcggccagaa
gccgagaccaaccatgttacttaccttcctccccacctccatccactccacagctcctcc
cacgctacttgcctaacacccagttcacaccaccactcccacctattgcccgcctcttcc
ctcagcccacacccctcggtgcaccaccccttgctccccaccgtgttgcctgccatgcca
ccgacctcccttctaggtggtcactctcgccttgactcaagtggactcagtcatctggct
ctagctcaccaccacccacaccagcaacagcagtttctgcaacaacaaccgccccctcag
ctgctgacccagacgcacggtggtgccagctacaaccagctgggcctatatcccatcatc
tggcagtatcataatggcacgcagcactcctatccacctggacttagcctgcctggatca
aagtgggtgcatccagagaatgctgtgaattcagacggtagcctaccaaggaacacctcc
agcccctggctccatcagcccacccctgtgacctcagcagacagcctcggtattctgagt
catgtcccgggtagaccagccagcgctgacccccacaggccccttaaaatctcctcacac
tccagccctccactctcaaaaacatctgcagatctccacaaaggggaactggagagtaaa
gtttttgtggatcccatgcgtggccttgtaacagcccacctgaagcaggagccagaccga
agccggacacccaacagcaaagagttgcagcgcctctacatggattcatctcacatgaag
cagcagacacagcctccccgcctgccactggacacgtcagaccggaccgttaagtacaag
gaggagaaccgccgcatcctacaggagagcattgaggtggccccctttactgccaagatc
cggtcaggagagccagagcgtgagccctatgcccgcattccctccctccccattaatgga
ccgcccaaggagaatgaacattcgccgtctgatctttacaagtacaagcactctgctgct
cagtcactgccgcagagcaactatttcacgaccctgtccaacagcgtggtgaatgagcca
ccccgtctctacccctccaaagagctcaactccctttctctctcgagtcccctgcctctg
ggctcttacactagtggcggaggcagcgccaagtccctgtccaagcctcccccgcttatc
aagcaccagccagagggtgagggcctggtagggaagatcagcgagcagctcagtcagcag
gtggccctgaatccactcactaccccagcggcagccagcgaacgccgcagtccagctatt
tcaccctcaaaccaactcaggagcatgcctgccctgcacagggcacctgtctttcaccca
cccacccagcaaacactggaccgcaaggaggctgtctacggtcgcctctcgccgcccacg
ctcacccccattcagccggtcagtgtggctgggaaggtatcggagcaacagaagcccccc
actctgctgccggagctcagggaggtgaagagcaatgtagagctgggctccagtgagcca
tggagggccagctctgactcacagagccacgataaagtggctcagtggcactcagacaaa
agtcaagggaagccacaggcagccacagcctctgttattgttcgctctagaacctgcatt
aagtatgactgctcaccgggccccaagtctggcgccaaggagatgtctggcagtaggcca
catacaggcaaaaaccaactggactgcaccaaactggctgagaccagagaacctggcaga
gttatccagcagaacacaaatagggaggatatttttttgcagtacaaaaagaactttgtc
cgagtctcccagggcagctttcccagctctgcggtagccgttgttaactctgtgtgcaat
agcagtactgatgtaaccacttctgcctctgctgcttccacatacaatgtgctgagtcga
ggcacagctgagctacattatcccacctcagccactccaagcagcagtaacattaacaga
ctggaaggccctgtacccaaatgcaggactcccaccggccctgagctgcaggagtgcaat
gccaggacagcctcccccagtggccagctgcctcagcctggtttggccccagttccacag
ccctactctgggaacttcatccacctgaagaagcacaaagccgccctggctgccgcccag
tcccgcggctcaagcagtgcctcagagagtgaaagcagcagtcgatcctctcaggaatca
cccaccatcaccacccaggatcgtgcctcgccaggcaacccagccagcaaagccagccct
ctacccaatggtcagccatcacagatgaaccagcccaactaccacaaactgaagaaagca
tggctcactcgccactcggaggaagatcgcaacactaacaaggtggagaagacgtccagt
gccgtctctgagatcattaagccatgtacggtcaacctagtagcgtccacctccagcgac
gtggagataggcaaagatggcaaatgcttagaggataaaatgagccaggaggacaggaag
ccgcgacgaggtccctccaagcggccacacgagtcatgctcggacagcggcgatgactca
gatggcagcgacagcaagcatgagcagagggcaaagaggcagcctaagcccacctacaag
aagaagcagaatgacatgcaaaagaagaaaggggaaaatgacaaggacgaggacgatgtc
aagcccaacggcattttcagaagcgccaaggagaaaaccaaactcaaactggccagcagc
aatggcattcctcgctcagtgctgaaagactggaggaaagtgaagaagctgaagcagaca
ggcgagtccttcctgcaggacgattcatgctcggagatcggccccaacctgcagaagtgc
cgcgagtgccgctcgatccgcaccaagaaaggagaagagcccacccactcgcccgtcttc
tgccgcttctactacttccgccgcctgtcatacagtaagaacggagttatccggatcgac
ggcttctcatcccctgaccagcatgacgaggaggccttgagtctctgggctccggatgca
tacgaagagaacgatctggacgtggaaacctccaaatatattctcagctacatcggagac
aagttctgccagctggtcatgagcgagaagactgcagccacatggataaagaaagatgcc
aagatagcctggaaacgggcggtgaggggggtgcgtgagagctgcgacgcatgcgaggcc
acattgttcaacattcactgggtgtgccagaaatgtggatttgtggtgtgcttggactgc
tacaaggcgaaggagaagaagaactccaaagacaaagaactgtacgcttggctgaagtgc
gtcaagggacagccacacgatcacaagcacttgatgccaacgcagattattccaggaaca
gtcttgacggacctggtaaatgccatgcacacgctcagggagaagtttggcatcaaagcg
cactgcgcctgtgccagcaagcagaacatcctcaacaagctcccatgcactaacggcgtt
tctcaggtgctccagaacgtgctgaaccacagcaacaagctttccctgtgcaagcctgag
gctggtcagcacaacttgggaccgaaggtggaggcaaacgggggcagtagcccagccagt
gacaccagcactgatagcaagctcacaccaccagagtctcagtcaccactgcactttctg
gccgacttggccgagcagaaatcccgggaagagaagaaagagaataaggagtcagctgta
gggaaggtgaaggaagagagcacagacgctctggaaacgttgcactgtaaagcttcatct
ctggtggccaacagcacagagcaaggctccacactgcgagacctgctcaccaccacggcc
ggaaaactgcggttgggctccacagacgccggcatcgccttcgccccggtctactccacc
gcctcacagactgggaaaagtggtcgcactatgcctaacatcctggatgacatcatcgct
tcagtggtggagaataagataccggcggaccgcaacactaagcagagcccaaaggctaaa
ccccaggaagaggccagggctgagaggaggaaacaagctgaggacgtgcctgagcagcat
gcagacatcccccactgctggttgtatgatcgtagactgctctggctcaaagaccaccgc
aacagcaacaactggaaactgttccgagagtgctggaagcagggacagcctgtgctcgtc
tcaggggttcacaggaagctcaacgccagcctgtggaaggctgaagctttcagccaggag
ttcgccgaccaccagggggatctgctgaactgcaaggacggagtggtgtccaactcgggc
atcaaagagttctgggacggctttgaggacctgaccaaacggcccaaatccagagatggc
gaggcgattgtgtacaggctaaaagactggccctcaggagaagagtttatggctctaatg
ccttctaggtatgatgatctgatgaagaacctccctctgcctgagtattcagacccagag
gggaatttgaacttggcctcccatctcccctcattctttgtgcgacctgacctaggccct
cgtctctgttgcgcatacggcgtggcatcatctcaggagcaggactttggcacagccaac
ctgcacatggaagtgtccgacgtcgtcagcgtgctcgtttacgtcggagtggccaaaggg
aacggagtcctctccaaaacaggagtgctgaagaggctggaggaagaggatctagatgac
aacgtgaagaagagattaaaggactcgagtgagactcctggagccttatggcacgtctat
gcgagcagagacgtggagaaagttcaagaatttctgcacaagatctctaaagagcagggt
gtggagatcccgccagagcatgatccggtcagggagccgggctggtaccttagccgcaag
cagaggcagcgtctgctcgaggagcacggcatacagggcagcaccatcgtccagttcctg
ggagactcggtccttgtgcctgccggagccctgcaccaggtgcagaacctacacagctgc
gttcaggtgatcaatgactttgtgtcgccggagcacgtggtgcactccttccacttaaca
caggagctgcgctcctccaaagaggaaatcaactacgaagataagctacaggtcaagaac
atcttttaccactgcgtaaaggatgctgtgggaacattaaagcagtgcagtgctgaggct
caggaggaagaggaggtgaactcatga
DBGET
integrated database retrieval system
