Ictalurus furcatus (blue catfish): 128617008
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Entry
128617008 CDS
T09387
Symbol
thbs2b
Name
(RefSeq) thrombospondin-2
KO
K04659
thrombospondin 2/3/4/5
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04145
Phagosome
ifu04510
Focal adhesion
ifu04512
ECM-receptor interaction
ifu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128617008 (thbs2b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128617008 (thbs2b)
09144 Cellular community - eukaryotes
04510 Focal adhesion
128617008 (thbs2b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128617008 (thbs2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128617008 (thbs2b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ifu04147
]
128617008 (thbs2b)
00536 Glycosaminoglycan binding proteins [BR:
ifu00536
]
128617008 (thbs2b)
Membrane trafficking [BR:
ifu04131
]
Endocytosis
Phagocytosis
Opsonins
128617008 (thbs2b)
Exosome [BR:
ifu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128617008 (thbs2b)
Exosomal proteins of colorectal cancer cells
128617008 (thbs2b)
Exosomal proteins of bladder cancer cells
128617008 (thbs2b)
Glycosaminoglycan binding proteins [BR:
ifu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
128617008 (thbs2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
EGF_3
Laminin_G_3
TSP1_CCN
TSP1_CFP_C
TSP1_ADAMTS
EGF
cEGF
DUF4763
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
128617008
NCBI-ProteinID:
XP_053495915
LinkDB
All DBs
Position
13:complement(15425152..15439223)
Genome browser
AA seq
1181 aa
AA seq
DB search
MILRKCHFGLVLLFLCASAIDPEEPVEDVSVFDLFESSGITQRTIGVKLFRGPDPDSPAY
RFIRFDHLPSVKPQALEQLVQQIQNNEGFTLTASLRQDRASRGTLVSIEGPGERRQFELL
SDGRANTLELVYWWADGSRNVIAFEDVELVDSQWKNVTLHVHGETATLYVGCSLIDSYIL
DEPFYEHLRASGGRMYVAKGSSRETHFRGLLQNVQFIFDIPLEDVLESQGCELANTEELN
TVSESAELVDVVSSISTNLISPNTDPPTMSPSEMMCERSCEELANLFQELKGLRVVVSNL
IDGLQKVTEENTAMREALNKIQDPVQQSICWQDGRLFENKEDWIVDSCTKCTCQDGKVVC
RQITCPPVSCANPSFVDGECCPVCLPMDSEDGWSPWSEWTQCTVTCGSGTQQRGRSCDDT
SNTCSGPSIQTRRCSLGKCDRRVRQDGGWSLWSPWSSCSVTCGEGLITRIRHCNSPIPQR
GGKDCDGEGRETQSCQTKPCPIDGGWGPWSPWATCSATCGGGLKSRERECNSPAPQHGGR
KCMGDFIDNEVCNKQECPINGCLSNPCFGGVECSTVSDGSWECGPCPPGYRGNGTFCEDV
NECNMVSDACHKVGGLQQCVNTDPGFHCLPCPPRYKGSQPYGLGVESAKTNKQVCEPYNP
CKDNTHSCHKNAECIFLSHITEPMYKCECRIGYAGDGIVCGEDFDLDGWPNQDLVCGANA
TYHCKKDNCPTLPNSGQEDLDGDGQGDACDKDDDNDEIVDERDNCPLMYNPRQYDYDKDA
IGDRCDNCPYEPNPAQTDTDNNGEGDACAIDIDADEILNEKDNCPFVYNTDQKDTDLDGV
GDQCDNCPLIHNPQQTDVDNDLIGDQCDNNQDIDEDGHQNNLDNCPYVANANQADHDNDG
KGDACDYDDDNDGIPDDRDNCRLVPNPDQMDENGDGRGDACKDDFDNDNIPDLFDACPEN
NAISVTDFRKFQMVHLDPKGTLQIDPHWVVRNQGKELVQTANSDPGIAVGYDEFSAVDFS
GTFYVNTDRDDDYAGFVFGYQSSRRFYVVMWKQITQTYWEDKPSKAFGISGVSLKVVNST
TGTGEYLRNALWHTGNTKNQVRTLWHDPKNIGWKDYTAYRWHLIHRPKTGFIRVVVYEGK
QIMADSGPVYDKTFAGGRLGLFVFSQELVFFSDLKYECRDN
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgattctccgaaaatgccacttcgggctggtccttttgtttctgtgcgcctccgccatc
gatccagaagaaccggtggaggacgtcagcgtgtttgacttattcgaaagcagtggaatc
acacagaggaccatcggggtgaaattgttccgaggcccggaccccgactccccggcgtat
cgcttcatccgcttcgaccatcttccctcagtcaaacctcaagctctggagcagctcgtg
cagcaaattcagaacaacgagggcttcaccttgactgcaagcctgcgccaggaccgtgcg
tcccgcggcactctggtctccatcgaaggtcccggcgagcgccggcagttcgagttgctt
tccgacggcagagctaatacactcgagctggtgtactggtgggccgacggctcgcgcaac
gtcatcgcgtttgaggatgtcgagctggtggactcgcaatggaaaaacgtcacgttgcac
gtgcacggcgagacggccacgctgtacgtgggctgcagcctcatcgacagttatattctc
gacgaacctttctacgagcacctgcgcgcctcgggtggacggatgtacgtggccaaagga
tccagccgcgagacacattttagggggctgctgcagaatgtgcagtttattttcgacatc
cctctagaggacgttctagagagccaagggtgtgagctggcaaatacagaggagttgaac
acagtgagtgagagtgctgaactggtggatgttgtctcctccatctccactaacttgatc
agcccaaacacagacccaccaacaatgagcccctctgaaatgatgtgtgagcgttcgtgt
gaggagttggccaacctcttccaagagctcaagggcctccgagttgttgttagcaacctc
attgatggattgcagaaagtgacagaggagaacactgccatgcgtgaggctctgaataag
atacaagatccagtgcagcagagcatttgctggcaggatgggcgactgtttgagaataag
gaggactggattgtggatagttgcaccaaatgtacatgccaggatgggaaagtggtgtgt
cgtcagatcacttgcccaccagtatcctgtgccaatccatccttcgttgatggggagtgc
tgtccagtttgccttccaatggacagtgaggatggctggtctccctggtcagagtggact
cagtgtacggtcacctgtggcagcggtacacaacaaagaggcagatcatgtgacgacacc
agcaacacatgctctggcccctcgatccagactcggaggtgcagtttaggaaaatgtgac
cgcagagttcgtcaggatggtggttggagtttgtggtccccctggtcttcgtgctcagtg
acatgtggggaagggttgatcactcgcatccgccattgcaactcccctattcctcagcga
ggaggcaaagactgcgatggcgaaggacgagagacacagagctgccagactaagccctgc
ccgattgatggtggctggggcccatggtcgccctgggcaacctgctcagcaacatgtggt
gggggtttgaaaagtcgtgagagggagtgtaatagccctgctcctcagcatggtggccgg
aaatgtatgggcgattttattgacaatgaagtatgcaacaaacaggagtgccccattaat
ggttgtctttcaaatccatgctttgggggagtggagtgcagcaccgtttctgatggctct
tgggaatgtgggccttgtccaccaggctaccgtggtaatggaactttctgtgaagatgtg
aatgagtgtaatatggtgtcagatgcgtgtcataaagtaggtgggcttcagcagtgtgtg
aatacagacccaggattccactgtttgccctgccctccacgttacaaaggctcccagccc
tatggccttggagtagagtcagctaaaacaaacaaacaggtgtgtgaaccttacaaccca
tgtaaagacaatacccacagttgccataagaacgctgagtgtatctttctcagccacatc
actgagcccatgtacaagtgcgagtgccgtattggttatgctggagatggaattgtgtgt
ggagaggactttgatcttgatggttggcccaatcaggatctggtgtgtggagccaatgct
acataccattgcaaaaaggacaactgcccaacccttcccaactctggtcaagaagacctt
gacggtgatggacagggagatgcctgtgataaggatgatgacaatgatgaaattgtggat
gaacgggacaactgcccactgatgtacaaccctcggcagtatgactacgataaggatgct
ataggggatcggtgtgataactgcccctatgagcccaaccctgctcagactgacacagac
aacaatggtgaaggagatgcctgtgctattgacattgatgcagacgagattctgaatgag
aaagacaattgtccctttgtttacaatactgaccagaaagacacagatttggatggtgtt
ggggaccagtgtgataactgcccactcatccacaacccacagcagacggatgtggataat
gatttgattggagaccagtgtgataataaccaggacatagatgaggatggccatcagaat
aacctggataactgtccctatgttgccaatgctaaccaagcagaccatgacaatgatggt
aaaggagatgcctgtgactatgatgatgacaatgacggaattcctgatgatcgggacaac
tgcaggcttgtgcctaatccagatcagatggatgaaaacggagatggccgtggtgatgcc
tgtaaagatgactttgacaatgacaacattcctgacctcttcgacgcatgcccagagaac
aatgccatcagtgttacggacttcaggaagtttcagatggtgcacctggatcccaaggga
acccttcagatcgacccccattgggtggtgcgaaaccagggcaaagaattggttcaaact
gctaactctgaccctggcattgcagtcggctatgatgagttcagtgccgtggatttcagc
ggaaccttctatgtgaacacggatcgggacgatgactacgcaggttttgtgtttggctat
cagtccagtcgacgcttctatgtggtcatgtggaaacagataacacagacctactgggag
gacaagccatcgaaggccttcggtatctctggagtctcactcaaagttgtcaactccacc
actggcacgggagagtacctgcgcaatgcactctggcacacaggcaacactaaaaaccag
gtacgaacactttggcatgatccaaagaacattggctggaaagactacactgcgtaccgc
tggcatcttatccacagacccaagactggtttcattagggttgtagtgtatgaaggcaag
cagatcatggcagactctgggcctgtctatgacaagacatttgctggtggtagactgggg
ttgtttgtattctctcaagagcttgtcttcttctctgacctcaaatatgaatgcagagac
aactga
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