Ictalurus furcatus (blue catfish): 128617011
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Entry
128617011 CDS
T09387
Symbol
rab40b
Name
(RefSeq) ras-related protein Rab-40B
KO
K07928
Ras-related protein Rab-40
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ifu04121
]
128617011 (rab40b)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
ifu04031
]
128617011 (rab40b)
Ubiquitin system [BR:
ifu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
128617011 (rab40b)
GTP-binding proteins [BR:
ifu04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
128617011 (rab40b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
128617011
NCBI-ProteinID:
XP_053495920
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All DBs
Position
13:complement(16529282..16539803)
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AA seq
278 aa
AA seq
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MSHRSSPAKAYDFLLKFLLVGDSDVGKGEILASLQDGATESPYGYNMGIDCKTTTILLDG
RRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEIDEHAPGVP
KILVGNRLHLAYKRQVTTENAQAFAERLGVTFFEVSPLCNFNITESFTELARIVLMRHGM
ERLWRPNKVLSLQDLCCRSIVSCTPVHLVDKLPLPVALKSHLKSFSMANGLNARMMHGRS
YSVIASSGAKRNGTKKSKLIYPPLSPSQSCTRTTCKIS
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgagccacaggagcagtccagctaaagcgtatgatttcttgttgaaattcctgcttgtg
ggagacagtgatgtgggcaagggcgagattttggccagtttgcaggatggggctacagaa
tcaccttatggatataacatggggattgactgcaaaaccaccaccatactgcttgatggg
cgtagagtcaaactgcagctttgggacacgtctggacagggacgtttctgcaccatattc
cgctcgtactccagaggagcacagggtgttatccttgtctatgacattacaaatcggtgg
tcctttgatggaattgacagatggattaaagagattgatgagcatgcaccaggagtccct
aagatccttgtggggaaccgtctgcacttggcctacaaacgtcaggtgacgactgaaaat
gcccaagcctttgctgagcggctaggtgtcaccttttttgaagtcagccctctgtgtaac
ttcaacatcactgagtccttcacagagttggctcgcatagttctaatgcgccacggcatg
gagagactctggagacctaacaaagtgttgagtctgcaggatctgtgctgccgatccatc
gtctcctgcacccctgtgcacctggtggacaaactcccgcttcctgttgccttaaagagc
cacctgaagtccttttccatggccaacggcctcaacgcccgcatgatgcacggacgctcc
tactcagtcatagccagcagcggcgcgaagaggaacggaacgaaaaaatccaaactcatc
tacccgcccctgagcccgtcacagagctgtacaaggaccacatgcaagatatcgtag
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