Ictalurus furcatus (blue catfish): 128617063
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Entry
128617063 CDS
T09387
Symbol
med1
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 1
KO
K15144
mediator of RNA polymerase II transcription subunit 1
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ifu03021
]
128617063 (med1)
Transcription machinery [BR:
ifu03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
128617063 (med1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Med1
SART-1
ATPgrasp_YheCD
Motif
Other DBs
NCBI-GeneID:
128617063
NCBI-ProteinID:
XP_053496013
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All DBs
Position
13:complement(2416409..2433020)
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AA seq
1777 aa
AA seq
DB search
MASAAAAAALRSGSPAREAVLDRVKVEEGTEAEKQSRVSALLERLHSKHNASRPWQETSK
VVRTAMEKRGVMNSAGHQLLLNCLETLQRALKVSSLASMTDRLESIARQNMLGSHLSPSE
TECYITSDMFYVEVQLDSVGQLIDVKVAHHGENPASCPELIQHLREKNFEEFSKHLKGLV
NLYKLPGDNKLKTKMYLALQSLELDLTKMMHMFRIATKANTVETILHGSVGLLTPRSGGH
LLSLQCYVSPYDIFEEGNGAQLNFTDTTFPRSLGVGVSVTVEGTSSVYKLPIAPLITGSH
PVDNKGTPTFSPASNSNCVDLPACFFLKMKRPMPFSLSFIHKMGNVTGIPVFESVPALSP
LYDLIIKSQLSEEDGGNAPASTRSMRFYASLPGQQHCYFLNGDAPVQDGKSLQGALVSKI
PFRHPAHVPALLDIIRHQAAYNTLIGSCVKKTYIKEDAPGLLQFEVCPLTDSSFSVSFQH
PVNESLVCVVMEVIDSRQVACKLYKGLSDALICTDEFITKVVQRCMSIPVTMRAIRRKAE
TIQADTPALSLIAETVEIMVKKNLPPTGSPGYMGMGAGPDGSNTVGMPGVGGATTPTGSS
SGGNLGPFPGVISSLFNMSHQGSSVVDTMGQIGSQQQLQQQLPLQHSHGPDDFNKVTQNP
ILTSLLKITGSVGSSPTPQGSAGSQPHLTPPPTTSPASNTKNHPMLMNLLKDNPSQDFAA
LYGSSPLERQNSSGSPRTDSQGQQCPGGGTKGKKKRPRGTDKGVMGVGGGMGMKQQSQQQ
QLGNISHQHHHTHPPTEDDFHRELFSMDVDASQNPIFDVNLPGDGLDTPHSITPAPSQCG
TPPSGPGMSYHPQSHVQSQTQAQSQTSGSIPRMVRLPSSESIGPDINDILSDIPDPATKG
SGGSHGQHHMGGEEGGSLDTPIRDSSSSGQGSAVFEADLFNANSNENTYTDPADLIAEAT
TAATPNSDASSSNFFPDTDFNPELLPGQGTFPHTSYFDDSSPSPEPDLDLVKNFSGGSQQ
NTPSGTPQNPMSHGRNTPDASLKDPFDVSMVFSGNSGGGKPLLGPGPDLGDSHSHGGGGQ
SPLTMGMAGLSSDFKSSEVKVKQQQMRPKEDNGGGNSGMLMGGTGSSEAKQLKRSRTPSS
EGKSKEKPPKRKKLDPEGKSPSHSSGGRPYTPPSGSVSSGGSMSGGGSKSPGSSGRSQTP
PGGATPPIPKITIQIPKTLTGGKTSSHGGYTSSSSAAVSTGGAGGTSSSKGHHSHSSSSS
GKIKTSKMEGSMGQSNSSKPPSTGGSGSGMPPQSKSSSLGMGSGKPGSSPITKHGMSGSG
SSGSSGAVSGNKMRPQGGKPPGSLINPSIKANISPSHSRSGSSDKLSSPMKLQQGQVPGT
PPSSKAKSPIGSGSGSSGGSKSSSGGGMSSQKQLGSGSSSGSSTSCTTSSSSGSMSFSSG
GQSQYGGSGGGGGSGGGGGGGGNNPNAKGKSPSRNKKPSLTAVIDKLKSVGSGGIGGEEC
EGGGGGGGSTTGSGGGGVPPNVGPPKRDKVEKEGKSKGSLSTGNSGDKKMMDPKGSGVSS
TGVAKIIISKPDGGSPSIKSKVTLQKPGDGSAEGSMRPQHSGLKASPLFSGSTPKHDRSS
PSHSRSPGYTPLFPDSESESGSSSVAEKSHQNSPSSDDDQSMRPLQPPQDYMSVSIGEKH
KKHKKEKKKQKERERERDRDRDRDRDKEKKKSTMSCGPSSHPLKADSWSRSPLSSSEPSI
SLLSSERASRPSPVYMHTEDDDLMDSALTGSNLEPFK
NT seq
5334 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcggcagcggcggcggcgctacgaagcggcagtcctgccagagaagccgtt
ttggaccgggtcaaagtagaggaaggcaccgaagcggagaagcagagtcgtgtttctgct
ctgctggagaggctgcacagcaaacacaacgcctcacggccatggcaggaaaccagcaaa
gtcgtccgcacagccatggagaagcgtggtgtgatgaactcggccggccaccagctcctg
ctcaactgtttagagacgcttcagagggcacttaaagtgtcctcgctggcgtctatgacc
gatcgcctggagtccattgcccgtcagaacatgttggggtcacacctgagtccctctgag
acggagtgctacatcacctctgacatgttctacgtggaagtgcagcttgactctgtgggc
caactgatcgacgttaaagtggctcatcacggagaaaaccccgcgagttgtcccgagctc
atacagcatctgagagagaaaaacttcgaggagttctccaaacacctgaaggggctcgtg
aacctgtacaagcttcctggagacaacaaactgaagactaagatgtacctggccctgcag
tccctggagctggaccttactaagatgatgcacatgttcaggatagccacgaaggcgaac
acggtggagacgatcctgcacggcagcgtgggtctgctcacaccgaggagcggcggccat
cttctgtccctgcagtgctacgtctcgccttacgacatttttgaggaaggaaacggcgct
cagctcaacttcaccgacacgaccttccctcgttctctcggagtgggcgtgtccgtgacc
gtggagggaacgtcatctgtctacaagcttcccatcgctcctctcatcaccggatctcac
ccagtggataataaagggactccgacattttctccagcatcgaactctaactgtgtagac
ttgccagcgtgtttcttcctgaagatgaagcggcccatgcccttctcgctgtccttcatt
cacaaaatgggcaacgttaccggtatcccagtgtttgagtcggttcctgcgttgtcccca
ctgtatgacctcatcattaaaagtcagctcagcgaagaagacggcggcaatgctccagca
tcgactaggtccatgagattttacgcgtctctgccaggacagcagcactgctactttctg
aatggagatgccccagtgcaggacgggaaatctctgcagggagcgctggtctccaaaatc
ccctttcgacaccctgctcacgtgcccgctctgctggacatcatacggcaccaagcagct
tataacacgctgattggcagctgcgtcaaaaagacctacataaaggaagatgcccctggg
ctgctgcagttcgaggtctgtccactgaccgactccagcttcagtgtgtccttccagcat
cctgtcaacgagtctctcgtctgtgttgtaatggaggtaatcgactcacggcaggtagct
tgcaagctgtataagggtttgtctgatgctttgatctgcacagatgaattcattaccaag
gtggttcagcgatgcatgtccatcccggtgacaatgcgagctatccgtcgcaaggcagag
acgattcaggcagacaccccagccttatcactaatagctgaaactgtggagataatggtg
aaaaagaacctcccgcccactggtagccctggttacatgggaatgggtgcaggacctgat
ggaagcaacactgtgggcatgcctggtgtagggggtgctactacacccacaggaagcagt
agtggtgggaatttggggccattcccaggtgtaataagctcccttttcaacatgagccac
cagggaagttcagttgtggacactatggggcagataggaagtcagcagcagctacagcag
cagctcccactacagcacagccatggtccggatgattttaacaaggtgactcagaaccca
atactcacaagccttctcaagataaccggaagtgtagggtctagtcccactccccagggc
tctgccggctcgcagccacacctgaccccaccaccgaccacctcacctgctagcaatacc
aaaaaccatcccatgctgatgaacttgttgaaggacaacccctcacaggactttgctgcc
ctgtatggcagcagccctctggagagacaaaactcttctggttctcctcgcacagacagc
cagggtcagcagtgtcctggaggaggcaccaaaggcaagaagaagcgaccaaggggcacc
gataagggtgtgatgggagtagggggagggatgggaatgaaacagcaatcccagcaacag
cagttgggaaacataagtcatcagcaccatcacacacacccccccactgaagatgatttc
catcgtgagcttttttccatggatgttgatgcctcacagaatcccatttttgatgtcaat
cttccaggtgatgggttggacactcctcacagtatcaccccagctccaagccagtgtggg
accccaccatcgggtcctggaatgtcataccacccgcagtcgcacgtccagtctcagaca
caagctcagtcgcagacgtcaggatccatacctcgcatggtgcgcctccctagctctgaa
agtattggtcctgacattaatgacattctgtccgatattcctgatccagccaccaaaggg
agcggcggcagccatgggcagcatcacatgggtggggaagaaggaggttccctagacact
ccaataagggattcctctagctcaggtcagggaagtgccgtgtttgaggccgacctattt
aatgccaacagcaatgaaaacacctacacagatccagcagatctgatcgcagaggccact
actgcagctacgccaaatagtgatgcctcctcgagtaatttcttcccagatacagacttc
aaccctgagttgctgcctggtcagggaacattcccacatacaagttactttgatgacagt
tcacccagtccagagccagatcttgaccttgtgaagaacttcagtggtggaagtcagcag
aacacaccctcgggcacccctcagaatccaatgtcacatggccgtaacacacctgatgcc
tctctaaaggacccttttgatgttagcatggtttttagtgggaacagtggaggaggaaaa
cctttgctaggcccagggccagatttgggtgattcacattctcatggaggtggtggacag
agtccactcacgatgggcatggcaggacttagcagtgactttaaaagtagtgaagtgaag
gtcaaacagcagcagatgagaccgaaggaggataatgggggaggtaactctgggatgctg
atgggaggaacaggctcttctgaagcaaagcagttgaagcgcagtcgcacaccttctagt
gagggaaaatcaaaagaaaagccacccaagcgtaaaaagcttgatccagaaggcaagtct
ccctcacacagctctgggggtcgaccctatacccctccgagtgggagtgtcagttctgga
ggatcgatgagtggaggtggatccaaatccccaggcagctctggtcgatctcagacccca
ccgggaggtgccaccccacctatacctaaaatcacaatacaaatccccaaaaccttaact
ggggggaaaacatcttctcatggtggttatacgtcaagcagttcagcagctgtaagtact
ggtggtgcaggtggcacaagcagcagcaaaggccaccattcccactcctcttcgtcttca
ggaaaaataaagaccagcaagatggaagggtccatgggacaaagtaacagttctaagcca
ccaagtacaggaggaagtgggagtggcatgccccctcagtccaaaagctcttcccttggt
atgggttcaggcaagccaggctcttctccgatcaccaagcatggtatgtcaggttcaggt
agcagtggcagcagtggagcagttagtgggaataaaatgaggccccaaggaggtaagcca
cctggatcactgataaaccctagcattaaggctaacatctctccttcacattctcggtct
gggagttctgacaagctttcctccccaatgaaacttcagcaaggacaggttccgggaacg
ccaccatcctcaaaagctaagtcaccaattggttctggaagtgggagttcaggggggtca
aaatcctcttctggtggtgggatgagttcccagaaacagttaggaagtggttcttcctct
ggttcttccacctcatgtactacctcctcttcgtcaggctctatgtcattttcctccggt
ggtcaatcacaatatgggggaagtggtggtggtggaggaagtggtggtggaggaggaggt
ggtgggaacaaccccaatgccaagggaaagtcccctagccgaaacaaaaagccttccctt
acagcagtcatagacaagctaaagagtgtgggtagtggcggcattggtggggaggagtgt
gaaggtggtggaggaggtggtggcagcactacagggagtggaggtgggggagtacctcca
aatgttggtcctccaaagcgagacaaggttgaaaaagaagggaaatccaagggatctctt
tcaacggggaactctggcgataaaaagatgatggacccaaaaggtagtggagtgagcagc
actggtgtggctaagattatcataagcaaacctgacggcggttctccaagcatcaagtcc
aaagtaactctccagaagcctggtgacggatcagcagaaggttccatgcgcccccagcat
tcaggcttgaaagcatctcctcttttcagtggctcaacaccaaagcacgaccgcagttcc
ccaagccacagccgttcgcctggatacacacctctgttcccagacagtgagagcgagtct
ggaagcagttcagtggcagagaaatcccatcagaacagccccagctctgacgatgatcag
agcatgaggccgctacaaccaccccaggactacatgtcggtcagcatcggagagaaacac
aagaagcacaaaaaagaaaagaaaaagcagaaagaaagagagcgggagagggaccgggac
agggacagggatcgagacaaggagaagaagaaatcaacaatgtcctgtggtccctcttca
cacccactgaaggcagacagctggtccaggtctcctctgtcctcctcagaaccctctata
tctttgctcagctccgagcgtgcctctcgaccgagtcctgtgtacatgcacactgaggat
gatgacctcatggactctgctctaactggctctaacttagaaccattcaaatag
DBGET
integrated database retrieval system
