Ictalurus furcatus (blue catfish): 128617079
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Entry
128617079 CDS
T09387
Symbol
pcgf5b
Name
(RefSeq) polycomb group RING finger protein 5-B
KO
K11489
polycomb group RING finger protein 5
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
128617079 (pcgf5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ifu03036
]
128617079 (pcgf5b)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
128617079 (pcgf5b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_4
zf-RING_10
zf-RING_5
Actin_micro
zf-Nse
zf-rbx1
zf-C3HC4_3
zf-RING_6
TRAF3_RING
E3_UbLigase_R4
DUF1272
Motif
Other DBs
NCBI-GeneID:
128617079
NCBI-ProteinID:
XP_053496041
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All DBs
Position
13:complement(11163265..11185303)
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AA seq
234 aa
AA seq
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MATQRKHLVKEFNHFITCYVCKGYLIKPTTVTECLHTFCKSCIVQHFEDSNECPKCGIQV
HETNPLEMLRLDNTLEEIIFKLVPGLREKEQQQEIEFWKKNKLKENDDDGPECKRMKMDE
DIDDGGDGDFHRNDPQIAICLDCLRNNGPIGENIVKGLMKKFIRCSTRVTVGTIKKFLSL
KLKLPSSYELDVLCNGEIMGKDHTMEFIYMTRWRLRGENAYPMVLEYRPRIDFG
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggccactcagaggaagcacttagtcaaggagttcaaccacttcatcacttgttatgtg
tgtaaaggctacctgatcaagcccaccacagtgacagagtgcctgcataccttttgtaaa
agttgcatcgtccagcattttgaagacagcaacgaatgtccgaaatgtggtatccaagtc
catgaaacaaatccactggaaatgttaaggttggacaacacattagaagaaatcatattc
aagcttgtgcctggacttcgggaaaaggaacaacagcaggagattgaattctggaaaaag
aataagttgaaagaaaatgatgatgacggtcccgagtgtaagaggatgaagatggacgag
gacattgatgatggaggggatggggacttccacaggaatgacccacagatagccatctgc
ctggattgtctgcgcaacaacggcccaataggagagaacatagttaagggcttaatgaag
aaatttattcgctgctcaactcgtgtcactgtaggaacaatcaagaagttcttaagtcta
aagttaaagcttccaagttcttatgagctagacgttctatgcaatggcgagattatggga
aaagatcacaccatggagttcatatacatgacgaggtggaggcttcgaggtgaaaatgcc
tacccaatggtactggaatatcgtcctcgtattgactttggctaa
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