Ictalurus furcatus (blue catfish): 128617411
Help
Entry
128617411 CDS
T09387
Symbol
arid5b
Name
(RefSeq) AT-rich interactive domain-containing protein 5B isoform X1
KO
K25857
AT-rich interactive domain-containing protein 5
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128617411 (arid5b)
Transcription factors [BR:
ifu03000
]
Eukaryotic type
Helix-turn-helix
ARID
128617411 (arid5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
Peptidase_S24
Cas_APE2256
Motif
Other DBs
NCBI-GeneID:
128617411
NCBI-ProteinID:
XP_053496493
LinkDB
All DBs
Position
13:8802334..8908937
Genome browser
AA seq
1185 aa
AA seq
DB search
MVRLMTCRVLFPQWVGSPCGLHGPYIFYKAFRFKLEAKARILSLGDFFFVRCKPEDPVCI
AELQLLWEERTTKQLLSSSKLYFLPEDTPQGRTVTHGEDEVIAVSEKVIVKLEDLVKWTV
WDSSCWNKGLHALPLKPSMLKELGKNGQRESLYRYRESTFNSGLNFKDVLREKAELGDDG
EDKRVLVLSYPQYCRYRSIIARLRERPASLLTDQVVLALGGIATLTSSTQILYCRDTFEH
PTLLENDSICDEFAPNLKGRPRKKKVPMCQRRDSQAQSGNTKEPGCVEARTPSKAKAETK
AVVSKPKSSSCKKVLAEEKSKEETGEECRAEEQAFLVALYKYMKERKTPIERIPYLGFKQ
INLWTMFQAAQKLGGYELITARRQWKNVYDELGGNPGSTSAATCTRRHYERLILPYERYT
KGEEDKPLPPIKPRKQEASMQEGSTKSKVPSTKRHKDEQNPKDWNEKDASAKVPEPDAED
IKDKEQLQEELMVKQEAQQSQVSARIDGEAMSPNAEDGAVQLVLQEEETKPVLKKSWDGG
PHEAIKHASLPQDGMPLKSEDSEVFPIAASMPLRHSHPLPNCYTQDQWQHERAEYKAPSY
TLGKTEQAGVKDSQNHVGMVLPTLKQRPLHSLSVPEIPTERAELPTKEESFCYNPLLYPR
SNPGIMSPLAKKKMLSQVSGTGLASNFPYGPPPPLVNKKASSSSTEETASEQPGPQVPSS
TGEASVMIKRPSVIQHAQSFKPREDRRPAIETSHREVCGEREIYPSEQPQRQPLHHSQPS
PTGEPYIVRTNLHSSVEKSSEVPRPGQVPSFLGDFCSSPHLHSLYRQAEHHLSKEQLTKY
LNRETYSRDCETAHGFPQSQHPDSGSLTYSPRLNPKEKGPPSEKVTEEQPTDLSLPKPSS
HKLPHSTSSLCSLSHSMMQQDIKNTPLFQAGSSQSSSLDYHPRACRVPPMTVSTPKKVVE
PQLKAHSGRGEETVSYKIDELARPILSTKSSPQNVGAARPLKRNLEELENGPTEKKIRAV
TPMHCSTPRDVPVKVRTPEPDNESMKPAEPAHAVHINSYAAEGHKFPMHSSIFPGLYPGA
FVSQVQEMCDSLGPHAPPGYSHPLQYLKNQAVISPLMPQFAIHSIMMQRQFLAQAANPAH
LYRHPMGTSYGDILHHGLYPMTALNPQPAFSPPQLSSVHPSTKLS
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atggtgagattaatgacttgtcgtgtgctgtttccgcagtgggtcggctcaccttgtggc
ttgcacggaccgtacattttctacaaggcgtttcggttcaagctcgaggccaaagcgagg
attttgtctctgggcgattttttcttcgtgcgctgtaaaccggaggacccggtgtgcata
gccgagctccagctgctctgggaagaaaggacaaccaagcaacttttatccagctccaaa
ctttattttctgccagaagatactccccagggaaggactgtcactcacggagaggacgaa
gtgatcgccgtgtcggagaaggtcatcgtgaagttggaagacttggtgaaatggacagtg
tgggattcatcgtgctggaacaagggcctgcatgcgctgcctctaaagccctcgatgctg
aaagagctgggcaagaatggccagagggaaagcctctaccgctaccgagaatccacgttc
aacagtggcctgaacttcaaggacgtcctgagggagaaggctgaactgggtgatgatggc
gaggataagagggtcctggtgctaagctatccacagtactgtcgctaccgctccatcatc
gcacggctccgtgagcggcctgcctcgctcctgacggaccaggtggtactagctctgggg
ggtatcgctacgctcacaagcagcactcagattctctactgcagggacacattcgagcac
cccacactgctggagaacgacagcatctgcgacgaatttgcacccaatttgaagggccgg
ccccggaagaagaaagtccccatgtgccagcgcagagactcgcaggcccagagtggaaac
accaaagagcccggctgtgtggaggccaggacacccagcaaggcgaaagcagaaacaaag
gcagtggtgtcgaaacctaagagcagcagctgcaaaaaggtattggccgaggagaagagt
aaggaggagacgggggaggagtgccgcgccgaagaacaggccttcctagtggccctctac
aagtacatgaaagagaggaagacccctatagagcgaataccctatctaggtttcaagcag
ataaacctttggacgatgtttcaggctgctcagaagctgggaggatacgagctgatcaca
gcccgccgacagtggaaaaatgtatacgacgagttgggtggaaacccaggaagcaccagc
gccgccacgtgtacacggagacactacgagaggctaatcttgccctatgagagatatacg
aaaggagaggaggacaagccactacctcccatcaagccccgaaagcaagaggccagcatg
caggaggggagcaccaagtcaaaggtgccgtccacaaagcgccacaaagacgaacaaaat
ccaaaggactggaacgaaaaggacgcctcggctaaagtccccgagccggatgcagaggac
ataaaggacaaggaacagcttcaggaagaactgatggtgaagcaagaggcacagcagtcc
caagtttcagcccggatagatggcgaggcaatgagtcccaacgcagaggatggggccgtg
cagctggtcctccaggaggaggagacgaaaccagtgctcaagaaatcctgggatggtggt
ccacatgaagcaatcaaacatgcatcgcttccacaggatggcatgccactcaaatctgag
gactccgaagtgttccccattgctgcgtctatgccactacggcactcccacccccttccc
aactgttacacacaggaccagtggcagcatgagagagcagaatacaaggcaccttcatac
accctgggaaagacagaacaggctggtgtaaaagacagccaaaaccatgtaggaatggtg
ctacccaccttgaaacaaagacctctgcactccctctccgtaccagagatcccaacagag
agggctgaactccccaccaaggaggagagcttctgctacaatccactcttgtatcctagg
agcaaccctggtatcatgtcccccctagctaagaagaagatgctgtcacaagtaagtggc
actggcttggccagcaatttcccctatggtccacctcccccattagtcaacaaaaaggca
tcaagcagcagtacagaagaaaccgcttctgagcaaccgggaccccaggtcccttcctct
acaggtgaggcaagtgtcatgatcaagcgtccgtctgtcatccagcatgctcagagtttc
aagcctcgcgaggacagaagacctgctattgaaacctcgcatagggaggtgtgtggtgag
agggagatatacccttctgaacaaccccagcgtcagcctcttcaccactcacagcccagc
cctacaggagaaccctacattgtgagaaccaatcttcattccagtgtggagaaatccagt
gaggtacctcgccctgggcaggtgccaagtttcctgggtgatttctgctcctcaccacac
ctgcacagcctctaccgacaggcagagcaccatctaagcaaggaacagctaaccaagtac
ctaaacagagagacttactcacgggactgtgaaactgcacatggtttccctcagagtcag
catcctgacagtggaagtctgacttactcgccccgtctgaatccaaaagagaaaggccct
cctagtgaaaaggtcacagaggagcaaccaacagatctgagtctcccaaaaccctcttca
cacaaattgccccactccacttcatctctgtgcagcctctcacattccatgatgcagcag
gacattaaaaacactcctctttttcaggcaggtagcagtcaaagttcaagcctggactat
caccccagagcctgtcgtgttcctcctatgactgtgtccactccaaaaaaggtggttgaa
ccccagctcaaagcacacagtggccgaggagaagagacagttagctacaagatagacgaa
ctggctcggcctatcctaagcaccaaaagtagcccacagaatgttggtgcggcacggcca
cttaaacgtaatctagaggagttggagaacggaccaaccgagaagaagattcgggctgtg
acccccatgcactgctccacgcctagagatgtcccggttaaagtgcggaccccagagcct
gacaatgaatccatgaagccggctgagccggcacacgcggtgcacatcaacagctatgct
gctgagggacacaagttcccaatgcactcctccatcttcccaggactgtatcctggggca
tttgtttctcaggttcaggaaatgtgtgacagcctgggccctcatgccccccctggttat
tcgcatccactgcagtacttgaagaaccaggctgtcatctcaccactcatgccccagttc
gccatccattccataatgatgcagagacagttcttggcccaggcggccaatccagcccac
ctgtacaggcacccaatggggacttcatatggagacattctccatcatggcctttacccc
atgacagccctcaatcctcagccagctttcagtcccccacagctctcctcagttcatcct
agcaccaaactctcttaa
DBGET
integrated database retrieval system
