Ictalurus furcatus (blue catfish): 128617660
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Entry
128617660 CDS
T09387
Symbol
nr3c1
Name
(RefSeq) glucocorticoid receptor isoform X1
KO
K05771
glucocorticoid receptor
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128617660 (nr3c1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128617660 (nr3c1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ifu03310
]
128617660 (nr3c1)
Transcription factors [BR:
ifu03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
128617660 (nr3c1)
Nuclear receptors [BR:
ifu03310
]
3. Estrogen like
3C. 3-Ketosteroid receptor
128617660 (nr3c1)
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Gene cluster
GFIT
Motif
Pfam:
GCR
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
128617660
NCBI-ProteinID:
XP_053496751
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Position
14:8818298..8870168
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AA seq
762 aa
AA seq
DB search
MEQGGVKNGAKRDEHLMTRSFSESPAEGVLHNGARGTMSFAPTTVVPPVSPLLQPVTGDL
PNGVNNTPSPEDITINLPSPLELFVEDPDLKMVGKDLRSQQSFQQQSSLELYSLGDNFSR
LEASIADLNSSLTSVDSLIGGGDPTLFPLKNEDFSPMGKGEMDLDQDPFGKDVDGSNPKL
FGENTMDLLEEFDLPESPTDLYLGDDEFPPMADDALLGVMVSDKDSKPVDSLSPSTSTIA
NVNNVNGGASSTPSSVSTSSPVLVIKQEKEPMIQLCTPGVIKQENASGRSFCQMTADLSS
PVRNVSIAICGVSTSSGQSYHFGSPVSSGSQQKDQKPVFNVYTPQPTGNEWGQGFGNASA
MQQRASNSFAATQSFSTDYAGSTARPEANTATSSATGKASGTHKICLVCSDEASGCHYGV
LTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRFRKCLMAGMNLDARKSKK
LKMKGVQQTNTAEVTPPPAPEARSLVPKAMPQLVPTMLSLLKAIEPETIYAGYDSTVTDT
STRLMTTLNRLGGRQFVSAVKWAKALPGFRNLHLDDQMTLLQSSWLFLMSFGLGWRSYQQ
CNGSMLCFAPDLVINEERMKMPYMGDQCAQMLKISNEFGRLQVSNEEYLCMKVLLLLSTV
PKDGLKSQAVFDEIRMSYIKELGKAIVRREENSSQNWQRFYQLTKLLDSMHDMVGGLMNF
CFYTFVNKSLSVEFPEMLAEVISNQLPKIKAGSVKPLLFHQK
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggagcagggaggcgtgaagaacggcgcgaagagagatgagcatttgatgacgcggagt
ttcagcgagagcccagctgagggagttttgcataacggcgcacgcggcaccatgtcattt
gccccgactactgtagtgcctcctgtcagccctctgttgcagcccgtgactggagatctc
cccaacggtgtgaacaacacgccctctccagaggatatcaccatcaatttaccatcccct
ctggagctctttgtggaggaccctgacctgaaaatggttgggaaggacttgaggtctcag
cagtcctttcagcagcagtcctcccttgagctctacagcttgggggataatttctcacgt
ctggaggccagcattgctgatctcaacagctccttaacgtccgtggactctttaatcgga
ggaggggaccctactctgttcccactgaaaaacgaggacttctcaccaatggggaaaggg
gaaatggatctagatcaagatcctttcgggaaagacgtggacggcagtaacccgaagctc
ttcggcgagaacaccatggacctcctggaagagttcgacttgcccgagtcgcccacagat
ctatacttgggagacgacgagttcccgccgatggcagacgacgctctgctaggagtcatg
gtttccgacaaggactccaagcctgtggactcgttgagccccagcaccagcaccatcgcc
aacgtcaacaacgtcaacggcggcgccagctcgactccttccagtgtgtccacaagcagc
ccagtcttggtgatcaagcaagagaaggagcccatgatccagctgtgcactccgggcgtg
atcaagcaggagaacgccagcgggaggagcttctgtcagatgaccgcagacctgtcgagc
ccagtcaggaacgtttccattgccatctgtggcgtcagcacgtccagcggccagagctac
cacttcggaagccctgtatccagcggcagccagcagaaagatcagaaacctgtttttaac
gtgtacacaccgcagccgacgggcaacgagtggggccagggattcggaaacgcaagtgcg
atgcaacagagagccagcaacagcttcgccgccacccagagcttcagcaccgactatgcc
ggttcgactgccaggcccgaggccaacaccgccacatcctcggccacagggaaggccagc
ggcacacacaaaatctgcctggtgtgttcagatgaggcatcaggctgccactacggagtt
ctcacctgcggcagctgcaaggtcttcttcaaaagagccgtggaagggcaacacaattat
ctgtgcgccgggcgaaacgactgcatcatcgacaaaatccgcaggaagaactgtcccgcg
tgccgtttccgcaagtgcctcatggccggcatgaacctggacgcacgtaaatccaagaag
ctgaagatgaaaggtgtacagcagacgaacacggccgaggtaactcctcctccggcgccc
gaggcgcgctcgctggtgcccaaagccatgccgcagctggtgcccaccatgctgtcactg
ctcaaagccatcgagcccgagaccatttacgccggctacgacagcacagtcacagacacc
tccacgcggctcatgaccaccctgaacagactgggagggcgccagttcgtctccgctgtc
aagtgggccaaagctctgcccggtttccgaaacctccacctggatgatcagatgactctg
ctgcagtcctcctggctcttcctcatgtcgttcggtttgggctggagatcttaccagcag
tgtaacggcagcatgctgtgtttcgccccagacctggtgatcaatgaggagaggatgaaa
atgccctacatgggagaccagtgtgcccagatgctgaagatttccaatgagtttgggaga
ctgcaggtgtcgaatgaggagtacctgtgcatgaaggtgcttctgctgctcagcacagtg
ccaaaggacggtctgaagagccaggctgtgttcgatgagatcaggatgtcgtacattaaa
gaactgggaaaagccatcgtgaggagggaagagaactccagccagaactggcaacgattc
taccagctcactaagctactggactccatgcacgatatggtgggtggactgatgaacttc
tgcttctacacgtttgtgaataagtctctgagcgtggagttccccgagatgctcgccgag
gtcatcagcaaccaactaccaaaaatcaaagccgggagcgtcaagccgctgctctttcac
cagaaatga
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