Ictalurus furcatus (blue catfish): 128617691
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Entry
128617691 CDS
T09387
Symbol
arid2
Name
(RefSeq) AT-rich interactive domain-containing protein 2 isoform X1
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128617691 (arid2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128617691 (arid2)
03021 Transcription machinery [BR:
ifu03021
]
128617691 (arid2)
03036 Chromosome and associated proteins [BR:
ifu03036
]
128617691 (arid2)
Transcription factors [BR:
ifu03000
]
Eukaryotic type
Helix-turn-helix
ARID
128617691 (arid2)
Transcription machinery [BR:
ifu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
128617691 (arid2)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
128617691 (arid2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
TSTD2_N
FOXP-CC
Motif
Other DBs
NCBI-GeneID:
128617691
NCBI-ProteinID:
XP_053496809
LinkDB
All DBs
Position
14:3765582..3790288
Genome browser
AA seq
1778 aa
AA seq
DB search
MLFVLVRNKTNFYCTFKPDGCLVLDQFTDSLATSTGKKSVARHRALPENGLPGVLGSQRA
WFGPILRIDMMANSTGKNVPEQRRKGLAFLDELRQFHQSRGSPFKKVPVVGGKELDLSAL
YVRVVSLGGFAKVSDKNQWSELGEEFNFPRSCSNAAFVLKQYYLRYLEKYEKVHHFGEDD
DEVQPGNPKPSLPIGAIPCSYNYQQHTVSDYLRQSYGLSTDFVPPCDYNKLVLSLLSGLP
NEVDFAVNVCMLMSNESKHTMQLEKEPKLVTLLLAHAGVFDDSLGSFSAVFGMDWREKTS
RDFAKFWKDIVEDNEVKDLISDKSCTPQDGTEQSAVQTSLFHPQRNMGTSDVEAQRVLQV
AVILRNLSFEETNVKQLAVNRTCLRFLLLCAHCTFISLRQLGLDTLANVAGELQLDPVDF
RTTHLMFHTITKCLMSRDRFLKMRAMEIMGNLSKAEDNGVLICEYVDQESYREVITLLTL
PDIMLVISALEVLYQLTELGEITCSKIASVDRSIDLLVRLVSVDLHTFGPEALTAIKLIE
HQSANSQVAEVRPQLVENVPTPVQGAPVTVTRVPVQTNPPPGIVEIDGEKFAAQWLSAHY
EAQAEGSISRSEMYSDYLAACGKLSRGGVLTSNGFYKCLRTVFPNHTIKRAEESKVNTQA
QIHVVGVRKRAIPLPIQLYYQQQQQQSCPVPGPKHEASLEPSHHTQSALPPGVGGQFVRA
PAPSLTANQAAPPVAFNIHGAPQAHPHVPIAPVPAHAAPQAPPPPPSSPAAPPMLPRPND
ILKTAMIQSSIPTAPTAPPASNHNNIPPAVSLPQALLPHTPVTLIQKALPQGHILTGRVQ
AACPPLEQQRLPVPQSQQASSSQDTVVLANPPQYSSTPCTPLVAEGQVFTVAGVQSAQGP
RVTFQNIAPKPALQAQHPLHHQPHHHHQQQQQQQQQQQSLVIVSPNPQPNPAFAPAIHHI
VLANPSTMQNAQTIQLSGQPATSPQPASSPGQLGSCPSPQMLSPSSNPGQGPPPTVSQML
SVKRQQQLQIHTSPPPPPPTPPPPPPTPPMAPPMAPAQTTSTESSLIKQLLLPKRGPTTP
GGKLILPAPQVPPPSASTRAPSPQVVYQVTNSSQGTPQTPQLNVQLMQSSLQGAGAVQTV
PISILPGQILSTSNPAAILPSNQVTFTVVPNSSFPNAAVNSQGTPSSLVPQTGLTINASP
PTLGFQLTPSVPPPVSACTTPVPPFRGDKIICQKEEEAKDATGLHVHERKIEVMENSLVT
EVSTKASNGQPMEVDGPGAKLLNGRKFDSSLPPYHSGNSQPEALQGTQALNGPTVQGNDA
TAKPTSGGPPSEFRKPLVNGVCDFERGDTSGTHPSKNIPNHKASKHMGNGEVLLPQQVHE
TFTDSLSPQQSTAKAEQLERLANGPKSSGHSAEISNGPSAQSLDTTGLRQQHPPRNHISP
LPAATPTTQNPPGADLATNGTSESRPLKRPAEDGERGASGIPNKVGVRIVTISDPNNAGS
SATMVAVPAGVDPSTVAKVAIENVAQQRPSVPATLPETTTRQPVSAQSPPPVVPTAQGAG
QSPVPPGDGPQAAALPLEQTRKPGQNFKCLWQACKRWFETPSQVFYHAATRHGNKEVYPG
QCLWEGCEPFSRQRLSFITHLQDKHCSREALLAGLKLEETQGSNSNTSKSPPPAGSSPAP
PRPQKAIVNHPSAALMALRRGSRNLVFRDFTDDKEGPLTKHIRLTAALTLKNIAKYSDRG
QKLVKRHENHLSVLALSNMEVSTTLAKCLYELTRTLQA
NT seq
5337 nt
NT seq
+upstream
nt +downstream
nt
atgttatttgtattagtaagaaacaaaacaaatttctattgcacttttaaacccgatggt
tgtctagtgttggaccagtttactgactctctggcgacctctacaggaaagaaaagcgtg
gcgaggcaccgcgcgctgccggagaatgggctccccggtgtcttaggcagccagagagcg
tggttcgggccgattctgcggatcgacatgatggcaaattcgacggggaaaaatgtaccc
gagcagcggaggaaaggactagctttcctggacgagctgcggcaatttcaccaaagcaga
ggatcgccgtttaagaaggtcccggtggtcgggggaaaggagctggacctgagcgctctg
tatgtcagagtcgtctctttaggcggcttcgcgaaggtctcggataaaaatcagtggtcg
gaacttggagaagagtttaattttcccaggagttgctctaacgctgcttttgttctgaag
cagtactatctgcgctatttagagaagtatgagaaggtccatcacttcggagaagatgac
gacgaggtgcaacccggaaaccccaaaccgtcgcttccgatcggtgcaataccttgctcc
tacaactatcagcaacacactgtctcagactatctccgccaaagctacgggctgtcgacg
gattttgtccctccgtgtgactacaacaaactggtgctgtccctgctgtcggggcttcct
aacgaggtggacttcgccgtcaacgtgtgcatgctgatgtccaacgagagcaagcacacc
atgcagctggagaaggagcccaaactcgtcacgctgctgctggcacacgccggagtcttc
gacgactcattaggtagcttttctgctgtattcggcatggactggagggagaaaacgtcc
cgagacttcgccaagttttggaaagatattgttgaagacaatgaagtaaaagatctcatc
tcagacaagagctgcacaccacaagatggcacggagcagagtgccgtgcagacctcgctg
tttcacccacagcggaacatgggcacgtctgacgtggaggctcagcgcgtgctgcaagta
gccgtcatcctgaggaacctgtccttcgaggagaccaacgtcaagcagctggcggtgaac
cgcacgtgtctgcgcttcctccttctctgcgcacactgcacgttcatctcgctgcggcag
ctgggcctcgacaccctggccaacgtagcaggagagcttcagctggatccagtggacttc
cgaacgacacacctaatgttccacaccattacaaagtgtctgatgtcaagggaccggttt
ctaaaaatgagagccatggagatcatgggcaacctaagcaaggcggaggataacggtgtt
ctgatctgtgagtatgtggaccaggagtcgtaccgggaggtgatcaccctgctcaccctg
ccagacatcatgctggttatctctgccctggaggtgctttatcagttgacggaactcgga
gagatcacctgctccaaaattgcctcagtggacaggagcatagatctcctggtgcgtcta
gtgtcggtcgatttgcacacgttcggacctgaagctctgacggctattaaactgatcgag
caccagagcgcaaacagccaggtggcggaggtacggccgcagctcgtagagaacgtacct
actccggtgcaaggcgcacctgtgacagtgacaagagttcctgtccagaccaaccctcca
cctggcatcgtagagatagatggagaaaagtttgctgctcagtggctgagcgctcattac
gaggcgcaggcagaaggctccatttctcgttcggagatgtactcggactacctggcagcc
tgcggcaagctgtcacgcggcggtgttctcacatccaatggtttttacaaatgcttaagg
acggtattcccgaatcatacgataaaacgcgcggaagagtctaaagtaaacactcaagct
cagatccatgtagttggtgtgaggaagagggcaattcctctccccattcaactgtattac
cagcagcagcagcagcagtcctgccctgtaccagggcccaaacacgaagcctccttagag
ccttcacatcacacccaatcagcgttgccgcctggtgtgggtgggcagtttgtccgggca
ccagcaccaagccttactgccaaccaggcagcaccaccggttgccttcaacattcatgga
gcaccacaggcccatcctcatgttcccatcgctccagtgccagctcacgctgctccacaa
gctccaccaccaccaccttcctccccggcagctccgccgatgcttccacggcctaacgac
atcctaaagacagccatgatccagagctccatccccacagcacccactgctccccctgcc
tccaaccataataatattccccctgcagtctctctaccccaagccctccttccgcatact
ccagtaacgctgatacagaaggcactaccacagggacacatactcacaggaagagtacag
gcagcgtgccctcccttggagcaacagcggcttccggtcccacagagccagcaagcttcc
tcctcacaggataccgtggtattggccaaccctcctcagtactcgagcactccttgtacg
ccattggtggcagaagggcaggtgttcactgtagcaggtgtacagagtgcccaaggacca
cgtgtgactttccagaacattgccccaaaacctgccctgcaggcacagcatccactacac
caccagccacaccatcaccaccaacagcagcagcagcagcagcagcaacaacagagcttg
gttattgtcagccctaatccacagcccaatcctgcctttgccccagccatccaccacatt
gtgttggccaacccctcaaccatgcaaaatgcccagactatccaactttccgggcaacct
gccacctctcctcaaccagcctcttcccctggtcagctcggctcttgccccagtccgcag
atgctgtctccatcttcgaatcccggccagggccctcctcccactgtcagccagatgctg
tctgtcaagaggcagcagcagttacagatccacacatcaccacctcctcctccgccaaca
ccaccaccccctcctccaacccctcccatggctccacccatggcccccgcccagactacc
tccacagaatctagcttgatcaaacaattgctgcttccaaagcgtggccctacaacgcca
ggaggtaagcttattctcccagcaccgcaagtccctcctccttccgccagcaccagggca
cctagcccacaggtagtttaccaggtaaccaatagtagccagggaactccgcaaacaccg
cagctgaatgtacagctgatgcaaagctcactgcaaggtgcgggagctgtacagactgtg
cccatctcaatcctaccagggcagatcctttccacctccaaccctgccgccatcttacct
agtaaccaggtcaccttcacggtagtgccaaactctagtttccccaatgctgctgttaac
agccaggggacgccgtcttcactggttccacagactggtctgaccatcaacgcgtcaccc
cccacgcttggtttccaactgaccccgtccgtaccacctccggtgtctgcctgcacaaca
cctgtgccaccttttcgaggtgacaaaatcatctgccaaaaggaggaggaagccaaggac
gctacaggacttcacgtccatgagagaaagatcgaggtgatggaaaactccttggtaact
gaagtctccaccaaagccagcaacgggcagcctatggaggttgatggacctggggccaag
ctgctcaacggtaggaagtttgactcaagtctacctccataccactcagggaacagccag
ccagaggctctgcagggcacacaggcactcaatggccccaccgtgcagggcaacgatgcc
acggccaaaccgacatcgggaggcccgccctctgaattcagaaagcccctcgtaaacggg
gtatgtgactttgaaagaggggacacaagtggtacccatccaagcaaaaacattccaaat
cataaagcttccaaacatatgggcaatggggaggtgctgcttcctcagcaagtacatgag
acttttactgactcgctgtcaccccagcagagcactgccaaagcagagcagctggaacgc
ctggccaacgggccaaaaagctcgggtcacagtgctgagatttccaatggcccctcagcc
cagagcttggacacgacaggcttgaggcaacagcacccacctcgcaaccacatctctccg
ctacctgcagccacacctaccacccagaatccccccggagcagacctggccaccaatggc
acatctgagagcaggcccctaaagagaccagcagaagatggggagcggggtgcttcagga
attcccaacaaggtgggagtgcggatagtcaccatcagcgaccccaacaacgctggcagc
agtgctacgatggtggcagtcccggcaggtgtcgacccaagcacagtagcaaaagtagca
atagaaaatgtagcgcagcagagacccagtgtgcctgctacgcttcctgaaactaccact
cggcagcctgtgtcggcacagtctccacccccggtggttccgaccgcgcagggagccggt
cagagtccggttcctccaggcgacgggcctcaggccgcagcgctccctctggaacagacg
cgcaaacccggacagaacttcaaatgtctttggcaggcctgtaaaaggtggttcgagacg
ccgtcgcaggtgttctaccatgcggctacgcgacacggcaataaagaggtttatcccggc
cagtgcttgtgggaaggctgcgaacctttttcccgccagagactctctttcattacacat
ctacaggacaagcactgctctagagaagcccttctagctggactcaagctggaggaaacg
caaggcagcaattccaacacttccaagtctcccccaccggcaggcagcagcccggctcct
cccaggccacagaaagctatagtgaatcacccgagcgcggctctcatggccctgcgccgg
ggctcccgcaacctggtgttcagggacttcaccgatgataaagagggaccactgaccaaa
cacattcgactaactgctgccttaacgttaaagaacattgccaagtattcagaccgtgga
caaaaattggtgaagcggcatgagaatcacctctcggtgctggcgctcagcaatatggag
gtctccaccacgctcgcaaaatgcctttacgaactcacgcgcacactgcaggcttga
DBGET
integrated database retrieval system
