Ictalurus furcatus (blue catfish): 128617807
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Entry
128617807 CDS
T09387
Symbol
lingo1a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128617807 (lingo1a)
Membrane trafficking [BR:
ifu04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
128617807 (lingo1a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
LRR_Zer-1
LRR_9
LRRNT
LRR_RPS2
Ig_C17orf99
V-set
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
128617807
NCBI-ProteinID:
XP_053496935
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All DBs
Position
14:complement(5120697..5281232)
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AA seq
620 aa
AA seq
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MVTGRMVAVDVSGHSYLVACWQPILILMLATVLSGSTTGCPSRCECNAQDRAVVCHRKKL
MSVPEGIPSETRYLDLSKNRIKTINPEEFSGFPNLEELELNENTISTIEPGAFNNLYGLR
TLGLRSNKLKLIQLGVFKGLSNLTRLDISENKIVILLDYVFQDLYNLRSLEVGDNDLVFI
SHRAFHGLNSLEHLTLEKCNLTSVPTEAFTHLHSLNTLCLRNVNINSIRDYSFKRLSRLK
VLEIANWPYLDTMTTNCLYGLNLTSLTITNANLTSIPYVALRHLVYLRFLNMSYNPIVII
EGNKLHDLLRLQEFHLVGGRLAIIEPYSFRGLNYLKILNVSGNALNTLEESAFHSVGNLE
TLVLYDNPLACDCRLLWVFRRRWRLNFNRQQPTCTSPEFVQGKEFKDFPDILQPNYFTCR
KSRIRERKAQQTYVDEGTTVHFACQADGDPAPVIMWLSPQKQFITPKTIGRLTMFPDGTL
EVRYAQIQDNGTYVCIASNAGGNDTAVAHLHVHSYSPDWPNQPNKTFAFISNQPSDSGPN
GTKATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKS
DAGLSSGAADAPRKFNMKMI
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggtaactggtaggatggtggcagtggacgtaagtgggcacagctacctggtggcgtgc
tggcagcccatcctaattctaatgcttgctactgtgctgtccggctctaccacaggctgc
ccatcccgttgcgagtgcaatgcccaggatcgtgctgttgtgtgccaccggaaaaagttg
atgtcagttcctgagggtattccatctgagacaagatacctagacctcagtaagaaccgc
attaaaacaattaacccagaggaattctctgggtttcccaacttggaggagctagaattg
aatgaaaacaccatatccaccattgaacctggggcctttaacaacctgtatggccttcgg
actcttgggctgcgcagcaacaagcttaaacttattcagctgggtgtattcaaaggcctc
agtaaccttaccaggcttgatatcagtgagaataaaatagttatcctgctagactatgtg
ttccaggatctctataatctacgctctctggaagtgggtgataatgacctggtgtttata
tcccaccgagcattccatggcctcaacagcctggaacacctgacactggaaaagtgcaac
ctgacctctgttcccacagaggcctttactcatttgcacagcctcaacactttgtgtctg
cgcaatgtcaacattaacagcatcagagattattctttcaaacgcctctctcgtctcaaa
gttctggagattgctaattggccatacctggacacaatgactactaactgcttgtacggt
ttgaatcttacatccttaacgatcaccaatgcaaatttaacctcgatcccatatgtggca
ctccgccacctggtttacctacgattcttaaatatgtcttacaaccccattgtaatcatt
gaagggaacaagctacatgacctgctcagactgcaggagtttcatctagttggtggtaga
ctggctataatagagccatattcatttagaggactcaactatctaaagatcttgaatgtg
tcagggaatgctctaaataccttggaagaatcagctttccactcagtgggaaacctggag
acactggtgctatatgacaaccctctggcatgtgactgtaggcttctctgggtattccgt
cgcaggtggaggctcaacttcaaccgccagcagcccacatgcacctcacctgagttcgtc
cagggaaaagagttcaaagatttccctgatatcttgcagcctaattacttcacctgccgc
aaatcaagaatccgggagcgcaaagcacagcagacgtatgtggacgagggaacaactgtg
cattttgcatgccaggcagatggagatccagccccagttatcatgtggctttccccacaa
aagcagttcattaccccaaaaacgataggaagacttaccatgtttcccgatggtacttta
gaggtgcgctacgctcagatccaagacaatgggacatatgtgtgtattgcaagtaatgca
ggtggaaacgacactgctgttgctcaccttcatgtccacagctactctcctgactggccc
aaccagcccaacaaaacctttgctttcatttctaaccagcccagcgacagcggtcccaat
gggacaaaagctactgttcctttcccctttgacatcaagactcttatcattgccaccacc
atgggattcatctctttccttggagtggtattattctgtttggtattgctgtttctgtgg
agccggggtaaaggtaacactaaacacaacatcgagattgagtatgtaccacgtaaatca
gatgcaggactaagcagtggtgctgctgatgcacctcgcaaatttaatatgaaaatgatt
taa
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