Ictalurus furcatus (blue catfish): 128617864
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Entry
128617864 CDS
T09387
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XIV) chain-like
KO
K08133
collagen type XIV alpha
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ifu00535
]
128617864
Proteoglycans [BR:
ifu00535
]
Extracellular matrix (ECM) proteoglycans
Others
128617864
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
128617864
NCBI-ProteinID:
XP_053497033
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Position
14:complement(25382591..25468498)
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AA seq
1870 aa
AA seq
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MFSLCPYALSCPTLAERMQARGIRALSPILLLALTSLFTKPTHGQVPAPRRLRFKELGSG
MLSVSWKEPKGEFDSYRFIYSSGSGEQERDVQVSKEEAKAVITDFDKSKEYSFKVFTISG
SRLSKPLRGTYKASRSEVSDSKPLTHSASQTSEPQQGNEIFEEISFTCKTPAIADIVILV
DGSWSIGRFNFRLVRTFLESLVSAFSISSDQTRIGLAQYSGDPRIEWHLNTHSTKEEVIN
AVKNLPYKGGNTLTGLALMYILENSFKPESGSRTDVPKIGILITDGKSQDDVIGPAQSLR
DAGIELFAVGVKNADENELRMIASPPEETHVYNVADFNVMSSIVEGLTRIVCQRVEHLNR
EIKGESVSPIPDAPSDLVTSEVTARSFRVTWAHAPGTVEKYRVVYYASRGGKPEEVVVNG
DQNSVVLQHLNSVTEYQVAVFAVYSNSASEGLRGSETTLALPMVNNLDLYDITHNSMRVQ
WVAAEGASGYMILYAPLSEAGSSDEKEVKVPDSVTEIELDGMTPATEYTVTVYAMYGDEA
SDPQTGQETTLPLSPARDLRITDVTHNSAKLSWEAASRKVKGYRIMYVKTDGVQTNEVEV
GRVTTKLLSDLTSLTEYTVAIYAIYDEGQADSLTDSFTTKSVPVPVRVSSSEVTTDSFRV
SWKHAASDISLYRLSWTPANGGETREMVIGGNLNSYVITGLRPLTEYEVMLTAIYKDKTE
SEKVVLIETTVARSTTVATTTTTTAVVRLGVRGLQLSDFTTFSMGASWELQGSNVYQYRV
SYISTRGDRAEQVMMVPGSQNAVVLQPLLSDTEYRVSVSAIYADGEGPAVTRSARTLPLI
APKNLKVSEEWYNRFRITWDTPPSPTMGYRVIYQPVSAPGRALETFVGDDVNTMLILNLM
SGTEYSVKVIATYTTGSSEPLAGRAKTLFLGVTNLNTYQVRLNSMCAQWQPHSHATQYRV
SVESLLNGQKQEVRLDGSEARHCFNDLNPNTQYKISVYALLQEAEGPAVTTVQKTLPVPT
SPPXRPPTTTPLPTIPVAKEVCKAAKADLVFLVDGSWSIGDDNFLKIIRFLYSTAGALDE
IGPGGTQVAIAQFSDDARTEFKLNSYENKESLLEAIQRISYKGGNTKTGRAMQHVKDAVF
TRVGGTRRGVPKVLVVLTDGRSQDDVNKISQEIQMEGYIVFAIGFADADYGELVSIASKP
SERHVFFVDDLDAFQKIEEKLITFVCEAASATCPSVAMSGSTLPGFKMMEMFGLVEHLYS
NVAGVSMEPGTFNSFSSYRLASDVLLAQPTRFIHPEGLPSDYTIAVVFRLLPQTPKEPFA
LWEILNSRNEPLVGIILDNAGKTLTFFNNDYKGDFQTVTFEGPEIKKLFYGSFHKLHIAV
SMTLAQVIVDCKLAGEKSINAAGNITIDGMEVLGRMVRSRGDRDNSAPFQLQSFDIVCST
SWARRDKCCDLPSLRKEADCPALPRACTCTQDSKGPPGPPGPPGGPGIRGARGDRGEPGP
VGPVGPSGESGIPGPQGPPGPQGLSGRSIRGPPGGPGERGEKGEAGPRGTQGVPGNPGSP
GRDGPPGPRGLPGNDGPQGRAGPPGNIGGPGAPGAPGQNGPPGPTGEQGPPGLAGSQGEK
GERGDAQSTSSVQAIARQVCEQLIQTHMARYNSILNHIPRQQAVSVRTVPGPPGEPGRPG
PQGQQGEQGQPGRPGFPGTNGENGQPGDRGLPGEKGEKGSPGAGVQGPRGPSGPPGPPGE
GRSGSPGPAGRPGNPGGPGRPGIPGSVGPAGPPGYCDPNSCGYNVAAPMQPNPYQTYGPD
EGGEEEDPYRSYGTHHSYYQPSYPEPRPVEPEETVVEDIEEELRSPGIQRLTRSTEEHEQ
NRETRTSAHF
NT seq
5613 nt
NT seq
+upstream
nt +downstream
nt
atgttctccctatgcccctatgctctctcttgccccacactagctgagaggatgcaggcg
agggggatcagggcactaagtccaattcttctcttggcattaacatcactgttcaccaaa
ccaacacatggacaagtgcctgctcctagaagattgcgttttaaggagctaggctcaggc
atgctcagtgtgtcctggaaggaaccgaaaggagagtttgacagctacagattcatctac
agctctggctcgggagaacaagagagagacgtgcaggtgtcgaaggaagaagccaaagct
gtgatcacagactttgataagagtaaagagtacagctttaaagtcttcaccatcagtggc
agtcggttgagtaaaccactccgggggacatataaagcttcaaggtcagaggtgagtgac
agcaagccactgactcacagtgcaagccagaccagcgagcctcagcagggaaacgagatc
ttcgaagagatttcattcacctgtaaaactccagcgatagcggatatcgtgattctagta
gatggctcttggagtatagggcgctttaatttccgtctggtgcgcacattcctcgagagt
ctggtgtcagcgttctccatcagctcggaccagacacgtatcggattggctcagtacagt
ggtgatccaaggattgagtggcacctcaacacacactccacaaaagaagaggtcatcaac
gctgtgaagaatttgccatataagggaggaaacacactaacaggtctagccctaatgtac
attcttgagaacagctttaagcctgagtctggatccaggacagatgttccaaaaatcgga
atcctgatcacggatgggaaatctcaggacgatgtcatcggccccgcccaaagtctccgg
gatgcaggaatagagctgtttgccgttggtgttaaaaacgctgatgaaaatgagctgagg
atgatcgcgtctcccccagaagagacccacgtgtataacgtggctgactttaatgtgatg
agctcgatagtggagggtttgaccaggatcgtgtgtcagcgtgtggagcatctcaacagg
gagatcaaaggtgaatccgtctctccgattcctgacgcacccagtgaccttgtgacctct
gaggtcacagcgaggagtttccgtgtcacctgggcccatgctccgggaacagtggagaaa
tatagagtggtgtactacgcctccagaggaggcaagccggaggaggtggtggtgaacggt
gatcagaactcggtggtcctccagcatctgaactccgtgacggagtaccaagtggccgtg
ttcgctgtctacagtaactctgccagtgaaggtctgagaggcagtgaaaccacattggcc
ttgcccatggtgaataacctggatctgtatgacatcacacacaatagcatgcgggtgcag
tgggttgctgcagaaggggcttctggatacatgatcctgtacgccccactgagtgaggca
ggctcatcagatgagaaggaggttaaagtaccagacagtgtaactgagatcgagctggat
ggtatgactcctgcaaccgagtacacagtcacggtctacgccatgtacggtgatgaagcc
agcgacccccagacaggccaggagaccacacttcccctcagtcctgcacgagatctgcgt
atcactgatgtgactcacaattccgctaagctcagctgggaggccgcgtctcgtaaagtc
aaaggctaccgcatcatgtatgtgaagactgacggagttcagaccaacgaggttgaagtg
ggtcgagttaccacgaagttgcttagtgacctgacgtctttgacagagtacaccgtggcc
atctacgccatctacgatgagggacaagccgattccctcacagacagcttcacaactaag
tcagttcctgtcccggtgagagtgagtagcagtgaggtgaccacagacagtttcagagtg
agctggaagcatgcagcatctgacatttccctctacaggctctcctggacgccagccaac
ggaggagagaccagagagatggtgattggtggtaatctgaattcctatgtgattacgggt
ctgaggccgctaactgagtatgaggtcatgctcacagccatctacaaagacaaaactgag
agtgagaaagttgtgctcattgaaactacagttgctagatcaacaacagtggcaactacg
accactactacagcagtggttaggctgggcgtgcgaggtctgcagctgagtgattttacg
acgttcagcatgggcgcatcttgggaactgcaaggatcaaacgtgtatcaatatagagtg
tcctacatttcgacacgtggagacagagctgaacaagtgatgatggttcctggcagtcag
aacgcggtggtgctgcagccgttgctgtcggataccgaatacagagtgagcgtgtcagcc
atctatgcagacggagaagggcctgccgttacacgctctgctcgcacgttgcctctcatc
gctcctaagaacctgaaagtgtcggaggaatggtacaatcgcttccgcatcacctgggac
acgcccccctctcccaccatgggatacagggtcatctaccagcctgtctcagcacccggc
cgtgctctggagacgttcgtcggcgacgatgtaaacaccatgctgatcttaaacttgatg
agtgggacggagtacagcgttaaggtcattgccacgtacaccacaggctccagcgagcct
ctcgctggcagagccaaaacactgttcctgggtgtgactaatctgaacacctatcaggta
cgactgaacagcatgtgtgctcagtggcagcctcattctcacgccacccagtaccgcgtg
tccgtcgagtccctgctcaatggccagaagcaggaagtgaggttggacggctccgaagcc
aggcattgctttaacgacctgaatccgaacacacagtacaaaatcagtgtttacgctctg
ctacaggaggcagagggccctgctgtcaccaccgtccagaaaacacttccggtgcccacg
agtcctccanccaggcctcccaccaccacaccgctccccactatccctgtcgcgaaggaa
gtttgcaaagccgcgaaggcagatctggtgtttttggttgacggctcatggagcatcggc
gatgacaacttcctgaagatcatccgcttcctgtacagcacagccggagcgctggatgag
atcggacctggaggcacacaggtggccatagcccagttcagtgacgatgctcgtaccgag
tttaagctcaactcatatgagaacaaggagagtcttctggaggccattcagaggatttca
tataaaggaggcaacactaaaacaggaagagctatgcagcatgtgaaggatgcagtcttc
accagagttggaggaaccaggaggggcgtgcccaaagtgctagtagtgttgacagacggt
cgttcccaagacgacgtcaataaaatctcccaggagatacagatggaaggatacatcgtg
tttgcgatcggttttgccgacgccgactacggagagctggtaagcatcgccagcaaaccc
agcgagaggcacgtgttcttcgtggacgaccttgacgccttccaaaaaatcgaagagaaa
ctcatcacgtttgtgtgcgaggccgcatcagcgacgtgtccttctgtagcgatgagcggc
agcacactaccaggctttaaaatgatggagatgtttgggttggtggagcatctgtacagc
aatgtggcaggcgtttccatggagccaggaacctttaacagctttagtagttacagactt
gccagcgatgtcctgctggcacaacccaccaggttcatccaccctgagggtctgccgtct
gattacaccatcgccgtggtgttccgcctgctgcctcaaacccccaaggaaccctttgca
ttatgggaaattctcaacagcagaaatgaacccttagtgggcatcatcctagacaacgca
ggaaagacgctgacgttcttcaataacgactacaagggtgattttcagaccgtgacattc
gagggccccgagattaagaaactcttctatggcagtttccacaagttgcatatagcggtg
agtatgacactggcgcaggtgatagtggactgtaagctggctggagagaagtccattaac
gctgctggcaacatcaccattgatggcatggaggttctgggcagaatggtccgatcccga
ggagacagagacaactctgcaccgtttcagctccagtcgtttgatattgtctgtagtaca
tcatgggctcgtagagacaagtgctgcgatcttcccagtctgaggaaggaggcggattgt
ccagcgctgcctcgagcctgtacatgcactcaggacagtaaaggccctcctggtccaccc
ggtccaccgggaggtcctggtattagaggggcaagaggagatcgaggagaacccggccct
gtggggccagtgggtcccagtggagaatcagggataccaggtcctcagggcccacccggc
ccccaggggctcagcgggcgatccatcagaggccctccgggtggtccaggtgagagaggc
gaaaaaggtgaagcaggacctcgaggtactcagggcgtcccaggaaacccaggatccccg
gggcgggacggccctcccggacccagaggtttgccaggtaatgacggaccacagggaaga
gcagggcctccaggaaatattggaggaccaggagctcccggggcaccgggtcagaatggc
cctccaggacccaccggagaacagggacccccaggccttgcaggttcacaaggagagaag
ggagaacgaggggatgcacagtccacttcatcagtccaagccattgccagacaagtgtgt
gagcagctcatacagactcacatggctcgttataactccatcctgaatcatatcccgagg
cagcaggcagtctcagtccgcactgttcccgggcctccaggtgagcctggtcggcccggt
cctcaaggtcagcaaggagagcagggtcagcctggacgtcccggattcccaggaactaac
ggagagaacggccaacctggagacagaggtcttccaggtgagaaaggagagaagggaagc
ccaggtgctggtgtccagggtcccagagggccttcaggacctccaggaccacctggtgag
ggaagaagtggcagccctggaccagctggtcgtcctggtaaccctggtggtcccggcaga
ccgggtattcccggatcagtaggaccggccggacctccgggatactgcgatccgaactcc
tgcggatacaatgtcgcagccccaatgcagcccaacccctaccaaacatacggtcccgat
gaggggggagaggaggaggatccataccgcagctacggcacgcatcactcctactaccag
cccagctaccccgagccacgccctgtcgagcctgaggaaacagtcgtcgaggacatagag
gaagagctgcgatcaccaggcatccagcgtctcacgcgcagcactgaagagcacgagcag
aacagagagacgaggacgagcgctcacttctga
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