Ictalurus furcatus (blue catfish): 128617871
Help
Entry
128617871 CDS
T09387
Symbol
prdm11
Name
(RefSeq) zinc finger protein 862 isoform X1
KO
K24644
PR domain zinc finger protein 11 [EC:2.1.1.-]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128617871 (prdm11)
Transcription factors [BR:
ifu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
128617871 (prdm11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
SET
FOG1-like_PR
DUF4954
Motif
Other DBs
NCBI-GeneID:
128617871
NCBI-ProteinID:
XP_053497042
LinkDB
All DBs
Position
14:23906162..23918879
Genome browser
AA seq
1140 aa
AA seq
DB search
MADSVAFYTEPCMETEPECSTGAISDGASEEPNEKKANHERCVNVGRRHVDCWFCEECKE
YFLEECLVHGPPVFVPDTPTALGVPDRAALTVPSGIRIVREGVDVDVCCMDENIPKGALF
GPYQGQLVGAQDKPSGTYSWMIVDEDNTYKTIDGCDVTKANWMRYIRKSSEEGERNLSAF
QHGEHIYFRVCRRMAVRERLRVWYSDEYAKRLQDMCEGSPNRKADTGINSEDVTQHQEEA
KGPVLRSTIHGRRTLIKHGSDEADSQPQVKKKKIDLIFKDVVEASLEASQCQNNPLNSTL
SLPRPRAQVSSVFSQSGTFSPNVVETILGQTERKVPHVACGLVPVKQLESSLERYVKVED
AQEEPKMISEGPSTSFCPNCVRLKRRIRELEAELLHFKQQEQTETLCLPPSESLPGDDLR
VVEAMTPTPAGMEEDDQDVDSADESITADMIVAADDSSKLSVSPGRRIRRFKQEWLKKFW
FLRYSPTLNEMWCHVCRQYTVQSSRTSAFIIGSKQFKIHTIKLHSQSNLHKKCLQLYKLR
MHPEKTEEMCRNMITLFNAAYHLAVEGRPYSDIRPLAELLKKCELKVVDQYMNESDCQIL
IHHISRAFKEDLVEKIRLSPFLGVIMDGQNDDLLADTVAVYVQFITTEGPPATEFVSLQR
LSGSCVDGYLQAVDRAFGDLGLRLQDMLVVGLGIDGSNISSSLRANLYIAIRKTFPFVLC
LPVMIHRPHLEILDSICGKELSCLDDLENNLKHLLSFYRYSPRMMTELRSTAPTLSEETE
FLGDIRAVRWIIGEPNVLNALIKDYLEVVSHLKGISGQTQRADAAAIALSLLQFLMDYQS
VKLIYFLLDIIAILSRLAFNFQGDYLLVSQVDAKIVEAIHEIGQLVDSPGEYLQEFEDNF
RESFNGVDLKNLRVAESKFQSIREKICLKTQGILAQRIDKHSHSVVQACKVLDLSSWPRS
RDDLQSYGEEEILVIFDHVETIPSSGRELSHDRVDLRGSLIREWRDLKADYFSMNCFKEV
MSHVCKYKQRFPLLNQILQLLRVLPTSTLCCDKGREALHKVRRNNHSRLTLEQINDLLTL
AVNGPPIANFDGKRPLDSWFEEKSGNSYTLSAEVLSRLSHTEQKPVLHSMDVNSEFYPGI
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atggcggactccgtcgccttttacactgagccatgtatggaaactgagccagaatgcagc
acaggtgccatcagtgatggtgcttctgaggagcccaacgagaaaaaagccaaccatgag
cgctgtgtgaacgtgggacgacgacatgttgactgctggttctgtgaagaatgtaaggag
tatttcctagaggaatgtctagtccatggcccgcctgtgtttgtgcctgatacgcccacc
gcgcttggagtgcctgatcgtgcagctctcactgtgccttcggggattcggatcgttagg
gaaggcgtggacgtggacgtgtgctgcatggatgagaatatcccgaaaggagctctgttt
ggcccctaccaaggccagctcgtaggagcccaggacaaaccgtcaggaacgtactcttgg
atgattgtcgatgaggacaacacttacaaaactatcgatggatgtgacgtaactaaagca
aactggatgagatacatccggaagtcttcagaggagggtgagagaaacttgagtgcgttc
cagcacggtgaacatatttacttccgagtgtgtcgcagaatggcggtcagggagaggctt
cgcgtgtggtacagcgacgagtacgcaaaacgtctacaggatatgtgcgagggcagtccc
aaccgcaaggcggacacagggataaattcagaagacgtcacccaacaccaagaagaagct
aaaggcccagttcttcgctcgactatacatggaaggagaaccctcataaagcacgggagc
gacgaggcagatagccagcctcaagtgaagaagaaaaaaatcgatctcatattcaaagat
gtcgtagaagcatcgctggaagcaagccaatgtcagaacaatccactaaacagcactcta
tcattaccaagaccaagagcacaggtcagcagtgtcttcagccaatccggtacattttca
ccaaatgtagtggagacaatcctgggccagactgagagaaaagtgcctcatgtggcctgt
ggacttgtgcctgtaaaacagctagagagcagtcttgaaagatatgtcaaagtagaagat
gcacaggaggagcccaagatgattagtgaaggcccatcgacatctttttgcccgaactgt
gttagactgaagagacgtatacgtgaactggaagcagagcttcttcattttaaacaacaa
gagcagaccgagacattgtgcttgcccccatccgaatccctgccgggcgatgacctgaga
gtggtggaggctatgacgcccactccagccgggatggaggaagatgaccaggatgtcgac
tctgcagatgaatccataaccgctgacatgatcgtagccgccgacgactcgtcgaagctg
tccgtcagcccgggtcggcgaatccgccgctttaaacaagagtggctcaagaagttttgg
ttcttgcgttattctccgacgttgaacgagatgtggtgccacgtgtgccgacagtacacc
gtacagtcgtcaaggacttccgctttcattatcgggtccaagcagttcaagatccacacc
atcaagcttcatagccagagcaatctccacaagaaatgtctgcagttgtacaagctacgc
atgcatcctgagaagacggaagagatgtgtcggaacatgatcacgctgttcaacgccgct
taccatctcgcggtcgaagggcggccgtattccgacatccggcccttggcagagctgtta
aaaaagtgtgaacttaaggtagtcgatcagtacatgaacgagagcgactgccagatcctc
atccaccacatttcccgagcgtttaaagaggacttggtggagaagatccgtctctcccct
ttccttggtgtaatcatggatggccaaaatgatgatttgctagccgacaccgttgcggtt
tatgtgcagttcatcaccacagagggtccgcctgctactgagtttgtctccttacagaga
ctgagtggtagctgtgtagatggataccttcaagctgttgaccgtgcctttggtgaccta
ggtctacggctacaggacatgctcgtggttggcttgggaatagatggttccaacatctct
tctagtcttcgggcaaacctctacatagccatacggaagacctttccgttcgtattgtgc
ctgccggtaatgattcatcgcccccatctagagatactggattccatctgtgggaaggag
ctttcatgtttagatgacttggagaacaacttgaagcatttgttgagcttctatcggtac
tcccctcgtatgatgaccgaactgaggtcaaccgcgcctactctgtctgaggagacggag
tttctcggggatatacgagcagtccggtggatcataggtgagcctaatgtcctaaacgct
ctcatcaaggactatctcgaagtggtgagccatcttaaaggcatcagcggtcagacccag
agggcagacgcagccgccattgctctttctcttctgcagttcctgatggattaccagtct
gtgaagcttatctatttccttttggatatcattgctattctgtcacgccttgccttcaac
tttcagggagattatctactggtttctcaagtagatgccaagattgtggaagccattcat
gagattggtcagctagtcgattctccaggagagtacctgcaagagtttgaggacaatttt
cgcgagagcttcaacggcgtggacctcaagaacctgcgggtggccgaatcgaagttccag
tccatccgggagaaaatctgcctgaagacccaagggattctggcccagcgtatcgataag
cacagccattctgttgtacaggcttgcaaggtgctcgacctgtcctcatggccacgcagt
agggatgacctccaaagctacggagaggaagagatcctcgtcatctttgaccacgtggag
acgattccctcgtcgggtcgtgagctgtcacacgaccgagtggatttgcgcggaagcctg
ataagagaatggagggatctcaaagctgactactttagcatgaattgttttaaggaagtg
atgagtcatgtctgcaaatataagcagcgctttcctttgctcaaccaaatcctgcagttg
ttgagggtcttgccgacgtcgactctctgctgcgacaaaggacgagaggctttgcacaaa
gtaagaaggaacaaccactcgagactgactctggaacagataaacgacctgctcacgttg
gctgttaacgggccgcctatcgccaacttcgatggcaagaggccgctagacagctggttt
gaggagaagtcggggaatagttacacgctttctgcagaagtgttgagcagactatcccac
actgaacaaaaacctgtgctgcactccatggacgtgaattcagagttttatcctggtatt
tga
DBGET
integrated database retrieval system
