Ictalurus furcatus (blue catfish): 128617877
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Entry
128617877 CDS
T09387
Symbol
amfra
Name
(RefSeq) autocrine motility factor receptor a
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04137
Mitophagy - animal
ifu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128617877 (amfra)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
128617877 (amfra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ifu04121
]
128617877 (amfra)
Enzymes [BR:
ifu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
128617877 (amfra)
Ubiquitin system [BR:
ifu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128617877 (amfra)
Multi subunit type E3
ERAD complex
128617877 (amfra)
LMBR1L-GP78-UBAC2 complex
128617877 (amfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G2BR
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-RING_16
zf-ANAPC11
zf-RING_5
Prok-RING_4
zf_RING_Vps8
zf-C3HC4_4
zf-RING_Vps41
TRC8_N
Motif
Other DBs
NCBI-GeneID:
128617877
NCBI-ProteinID:
XP_053497056
LinkDB
All DBs
Position
14:16355745..16368436
Genome browser
AA seq
622 aa
AA seq
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MPLVFLERFPWPSLQTYTALSAVLLAGTLLNAYTAVTETAAPAAEETQSNPVDNISDGNV
ATDILPYLISDSLFVWVLVNTACCVLMLIAKMIQCIVFGPLRVSEKQHLKDKFWNFIFYK
FIFIFGVLNVQTVEEVVQWCLWFAVLIFLHLMVQLCKDRFEYLSFSPTTPMSSHVRVLAL
LVSMLLCCGGLAVLCGLVGHLHGMHTVAFMAAECLLVTVRTGHVITRYSIHLWDLNHEGT
WESKGTYVYYTDFIMELTLLCLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRI
RRHKNYLRVIDNMESRFAVATPDELVANNDDCAICWDSMTSARKLPCGHLFHSSCLRSWL
EQDTSCPTCRMSLNINEGVREEGQRAPADGNMAAVPGNDVRPHLNHFFHFDGSRIASWLP
SFSVEVMHTTNILGIAQVNNSQLSAMAHQIQEMFPQVPYHLVLQDLQLTRSVEVTTDNIL
EGRIQVPFPAQPLDRAPVQVSQAPGEPAGGSRGSEPTTAETEDLEVRGSRFSKSADERQR
MLHQRKEELLLRARRRYLNKSDIKEASSFSVAASNEEEEEEEDDVPSSFEEDDSSSDSLT
MRRRVLAAAAERRLHRQADAPI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgcctctggtgtttctggagaggtttccttggcccagtttgcagacttacaccgctctg
agtgcagtgctgctggctgggactttgttaaatgcctacacagctgtgacagagactgca
gctccagctgcagaagaaactcagagcaaccctgtagacaacattagtgatggaaatgtg
gccacggatatactgccttatctcatctcagacagcttgtttgtttgggttctggtgaat
acagcatgctgtgtcctcatgctgatcgccaaaatgatccagtgcatcgttttcggtcct
ctgagggtcagtgagaaacagcacttaaaggacaagttctggaacttcatcttctataaa
ttcatcttcatatttggggtgctgaatgtgcagaccgtggaagaggtggtgcagtggtgt
ttgtggttcgctgttctaatcttcctccatctcatggtccagctctgtaaagatcgcttt
gaatatctgtccttttctccgacaactcccatgagcagtcatgtgcgagtgctggccctg
ctggtgtccatgctgctgtgctgtggaggtctagctgtgctctgtggccttgttggccat
ctccatggcatgcatactgttgcctttatggctgctgagtgtttacttgttacagtgcgc
actggacatgttattacgaggtactctattcacttgtgggatctgaaccatgaaggcact
tgggagagcaaaggcacctatgtctactatactgacttcattatggagctcaccctcctc
tgccttgacctgatgcatcacatccacatgctgctctttggaaatatttggctgtctatg
gccagcctggtgatctttatgcagcttcgctacctctttcatgaggtgcagagaagaatc
cgccgccacaagaactacttgcgtgtcattgacaatatggagtccagatttgcagtagcg
accccggatgagcttgttgccaataatgatgactgtgcaatctgctgggactcaatgacc
tcagcacggaagctgccctgtggacaccttttccatagttcatgtcttcgatcgtggttg
gagcaggacacctcctgtccaacatgccgcatgtcactgaacattaacgagggtgtgaga
gaggaggggcagagggcaccagccgatggcaacatggctgcagtgcctggaaacgatgtc
cgacctcacctcaaccacttctttcactttgatggctcacgaattgctagctggctcccg
agcttttctgtggaagttatgcatacaaccaacatcctgggcatcgcacaggtcaacaac
tcacagctcagtgccatggcccatcagatacaggagatgttccctcaggttccttaccat
ctggtgctgcaagatttgcagctcactcgctctgtggaggtcaccactgacaacatcctg
gaaggcaggatccaggtgcccttccctgcccagcccctggaccgagcacctgttcaggta
agccaggcaccgggtgagcctgctggaggtagcaggggttcagagcccaccactgcggag
acagaggaccttgaggtgcgtggcagccggttctcaaaatctgcagatgagagacagagg
atgctgcaccagagaaaagaggagctgctgctgagagcgcgcagacgctatctaaacaaa
agcgatataaaagaagcttcctccttctctgttgctgcctccaatgaggaggaggaggag
gaggaggatgatgtcccttcctcttttgaagaggacgactccagttcagactctttgacc
atgcgtcgcagggtgctagcagctgcagccgagcgacgtttgcacaggcaggcagacgca
cccatctga
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