Ictalurus furcatus (blue catfish): 128617949
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Entry
128617949 CDS
T09387
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03022
Basal transcription factors
ifu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128617949 (gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
128617949 (gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ifu03021
]
128617949 (gtf2h1)
03400 DNA repair and recombination proteins [BR:
ifu03400
]
128617949 (gtf2h1)
Transcription machinery [BR:
ifu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
128617949 (gtf2h1)
DNA repair and recombination proteins [BR:
ifu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
128617949 (gtf2h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
128617949
NCBI-ProteinID:
XP_053497185
LinkDB
All DBs
Position
14:complement(23504018..23522885)
Genome browser
AA seq
549 aa
AA seq
DB search
MAAVSEEVLLVVKRVRQRKQDGTLYLMTERIAWGPEGKDRFTVSHPYADIRCQKISPDGK
AKIQLQLVLHTGESTTFHFANESTALKDREAAKDLLQQLLPKFKKKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLKLSSVDHSISNNKQQEVGISAAFLADIRPQTDG
CNGLRYNLTSDIIESIFRTYPAVKQKYAENVPHSMTEKEFWTRFFQSHYFHRDRINTGQQ
DIFSECAKQDEKGLKSMVVQGVKNPMVDLQSLEDKILDEGYGSLTVPSTSNSCKTVKENS
NSAIIKRFNHHSAMVLAAGLRKVEAASDQASETSGTDGNSRDSDCFQPPIKKVKLQEAIE
YEDLENESGPKTIALNLKKSDRYSHGPVPLQSQHYSTSQDIINSISCIREEMSCYKPCLT
QVMSSSVASLAITALSPGGVLMQAGHQQTISQLVPSDVQSELKHLYTAAGELLRHFWSCF
PVNTPFLEEKVVKMQSNLERFQSSKLHPFQEKIQREYLSTNLTSHLEEMIQAAYNKFHAW
QTRRMMRKT
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggtgtcggaggaggtgctgctggtggtgaagagggtccggcagagaaaacag
gatggtacactttacctgatgaccgagcgcatagcctggggcccggaaggaaaagatcgc
ttcaccgtcagccacccgtatgccgacatccgttgtcagaagatcagtccagatggcaaa
gcaaagatccaacttcaattggtgttacacacaggagagagcaccaccttccactttgct
aatgaaagcacggctctaaaggaccgggaggccgccaaagacctgctgcagcagctcctg
cccaagtttaaaaagaaagcgaacaaagaactagaagagaaaaacaggatgctgcaggag
gatccagtactgtttcagctctataaagacctggtagtgagtcaagtcatcagcgcagaa
gaattttgggccaatcggctgaagttaagctctgtagatcactccatatccaacaataag
cagcaggaagttggaatatcggcagctttcctggcagacattagaccacagactgacggc
tgtaacggcctgagatacaacctgacctctgacatcatcgaatcgatcttcagaacatac
cctgcagtcaaacagaaatatgctgaaaatgtgcctcacagcatgacggaaaaagagttc
tggacgcgcttcttccagtcacactacttccacagagatcgcattaacactgggcagcag
gatattttttcggaatgtgccaaacaggatgaaaagggtttgaagtccatggttgttcaa
ggtgttaagaatcccatggtggatctgcaatccctggaggataaaatattagatgagggc
tacggctccttaacggttccctccacatccaactcctgtaaaacggtaaaagagaatagc
aactcggccatcattaaacgcttcaaccatcacagtgccatggtgctggcagctggccta
cgcaaagtggaagcagccagtgaccaggccagtgagacaagtggcacagatgggaattcc
agggactctgactgctttcagccgccaattaaaaaggtgaaattgcaagaggctattgag
tatgaggacctggagaatgaatctgggcctaaaacaattgctctgaatcttaagaaatct
gaccggtattcccacggtcctgtgcccctgcagtcccagcactactccacaagtcaggac
atcatcaactcaatcagctgcattagggaggagatgagctgctacaaaccctgccttact
caggtgatgtccagcagtgtggctagtttggctattacagccctttcacctgggggggtt
ttaatgcaagctggacaccaacagaccatcagtcagttggtacccagtgatgttcagagt
gaactgaagcacttatacacagcagcaggggagctgctacggcacttctggtcctgtttt
ccagtcaacacgcccttcctggaggagaaggtggttaagatgcagtccaatctggagaga
ttccagtcatccaagctccacccattccaagagaagatccagcgggaatacttaagtacc
aatctgaccagtcatctagaagagatgatccaggccgcctataacaagttccacgcctgg
cagacgcgccgtatgatgaggaaaacctga
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