Ictalurus furcatus (blue catfish): 128617967
Help
Entry
128617967 CDS
T09387
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04510
Focal adhesion
ifu04512
ECM-receptor interaction
ifu04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128617967
04518 Integrin signaling
128617967
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128617967
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ifu00536
]
128617967
Glycosaminoglycan binding proteins [BR:
ifu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
128617967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_TEN
EGF_Teneurin
EGF_2
EGF_Tenascin
Fibrinogen_C
fn3
hEGF
EGF
DUF7949
Fn3_Dep-1_3rd
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
FN3_Tor_3rd
Fn3_Dep-1_2nd
Ig_J
EGF_PEAR1L
EGF_integrin
DACNV
Motif
Other DBs
NCBI-GeneID:
128617967
NCBI-ProteinID:
XP_053497220
LinkDB
All DBs
Position
14:29947904..29991943
Genome browser
AA seq
1346 aa
AA seq
DB search
MPFLLHLILFLIPSPTLLSHSASVPAESQTVKMVISERCVSNPDVVEGQEVDLTPGSPLV
LTHRIRLVPSTASGSCCQSEFAALRERLEVLEREVSELREKCGGLEGGCCTSQQSKGAGC
TTVRPPTDECLNDCNDQGRCEDGKCVCYPGFSGPDCSVPDCPGDCSNKGKCVNGKCVCDP
GFTGPNCSVRTCPKNCSSHGRCVNGRCVCNAGFTGPDCSTAQCPGNCNNKGRCVNGKCVC
NTGFTGSDCSERSCPGNCNNKGRCVNGKCVCNTGFTGLDCSEQSCPGNCKNKGRCVDGKC
VCDEGFTGLDCSERSCPGNCNNKGRCVNGKCVCNTGFTGPDCSERSCPRNCNNKGRCVNG
KCVCDEGFTGPDCSERSCPRNCNNKGRCVNGKCVCDEGFTGPDCSERSCPGNCNNKGRCV
DGKCVCDEGFTGPDCSERSCPGNCNNKGRCVNGKCVCDTGFTGPDCSERSCPGNCNNKGR
CVNGKCVCDTGFTGPDCSERSCPGNCNNKGRCVNGKCVCDTGFTGPDCSERSCPGNCNNK
GRCVDGKCVCDEGFTGPDCSERSCPGNCNNKGRCVDGNCVCNTGFTGPDCSERSCPGNCN
NRGRCVNGQCVCEVGFTGQDCSTKTCPNNCSNRGRCVNGKCVCNPGFAMPDCSECKDGLT
GPDCATALIAVSYLSARNITESSVTLFWTPPVVQYNTYRITFISEKESDQKITSMVNGGF
STYTQVGLAPGQRYTVTITGEKDGKMGAKSTTTFQTLISGPKNLQVVKTSTTSVIVQWEE
AQGDIDRYILSISPNQTDGSGQGSQEMRLPPGRDSAQIDGLEPGRLYDISLVAERGGTRS
LPATVQATPGPEPPSHLSFSDITDTSLTVSWRRPKSSVSRFKVTYMHTKEGEPISVTVDS
STTTLSLTKLSPGSTYEVSVISVLGLDESDPVKDFVITLPDPPTDLRAINITDTKALLLW
RPALATVDQYIITYHSEEAPGSELSVRVSGNAVEEQLQALKPSTKYKVTIISRLGEQKSS
STHSTFTTASGSPGKGEGPRDLTAKHVTAHTAVLSWKPPASAVTSYKLTYFTKGGERKEV
TLNPGVTEHKLSGLRPSSMYTALLQGERGGVYTAAISTEFTTGTLRFPYPSDCSQQLMNG
QTESGLVEIFPGGNQGQPVMVYCDMETDGGGWTVFQRRSDGKTNFFRNWQEYRKGFGDLE
GEFWLGNDFLHNLTTMTPMNMRVDLRSGDESVYAHYSTFSVDTMKKHYMMRVSGYSGTAG
DSLRYHDKRPFSTFDRDPQPFITRCAMSYRGGWWYKNCHEANLNGLYNTHTNHQGVIWTA
WKGKKFSIPFTEMKLRPASFKAHGQG
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atgcccttcctcttacacctcatcctcttcctcatcccaagccccaccctgctttcccac
agtgcatctgttcccgccgagtcacagacagtcaaaatggtgatatcagagcggtgcgtc
tctaaccccgacgtggtcgaaggtcaagaggttgacctgacacccggttctcctctagtt
ctgacccaccgaatccgtttggttcccagtactgcgtccggttcatgctgccagtctgaa
tttgcggctcttcgagagcgactcgaggtgctcgagagggaagtttcagagctcagggag
aaatgtggaggcctggaaggcggctgctgcacttcacagcaaagtaaaggagcgggctgc
accaccgtccgtcccccaacagatgagtgtttgaatgactgcaatgaccagggccgctgc
gaggatgggaagtgtgtgtgttaccctggatttagcggacctgactgcagtgtgcccgac
tgccccggagactgcagcaacaaggggaagtgtgtaaatggcaagtgtgtttgtgatccc
ggtttcaccggaccaaactgctctgttagaacatgtcccaaaaattgcagcagccatggc
aggtgtgtgaacggaagatgtgtgtgcaatgcaggattcactggtccagactgctcaact
gcacagtgtcctggaaattgcaacaacaaaggaagatgtgtgaatgggaagtgtgtgtgc
aataccggattcacaggttcagactgttctgagaggtcctgccccggaaactgcaacaat
aaaggcaggtgtgtgaacgggaagtgtgtatgcaatacaggattcacaggtctggattgt
tctgagcagtcctgccctggaaattgcaaaaacaaaggcaggtgtgtggacgggaagtgt
gtgtgtgatgaaggattcacaggtctggactgttctgaaaggtcctgccccggaaattgc
aataacaaaggcaggtgtgtgaacgggaagtgtgtgtgcaacactggattcacaggtcca
gattgttctgagaggtcctgccccagaaattgcaacaacaaaggaagatgtgtgaacggg
aagtgtgtgtgtgatgaaggattcacgggtccagattgttctgagagatcctgccccaga
aattgcaacaacaaaggaagatgtgtgaacgggaagtgtgtgtgtgatgaaggattcaca
ggtccagattgttctgagagatcctgccctggaaattgcaacaacaaaggcaggtgtgtg
gatgggaagtgtgtgtgtgatgaaggattcacaggtccagattgttctgagaggtcctgc
cccggaaattgcaacaacaaaggaagatgtgtgaatgggaagtgtgtgtgtgataccgga
ttcacaggtccagactgttctgaaaggtcctgccccggaaattgcaacaacaaaggaaga
tgtgtgaacgggaagtgtgtgtgtgataccggattcacaggtccagactgttctgagagg
tcctgccccggaaattgcaacaacaaaggaagatgtgtgaacgggaagtgtgtgtgtgat
actggattcacaggtccggattgttctgagcggtcctgccctggaaactgcaacaacaaa
ggcaggtgtgtggatgggaagtgtgtgtgtgatgaaggattcacaggtccggactgttct
gagcggtcctgccccggaaattgcaacaacaaaggcaggtgtgtggatggaaattgtgtg
tgcaatacaggattcacaggtccggattgttctgaacgttcctgccctggaaactgcaac
aacagaggcagatgtgtaaacggacaatgtgtgtgtgaagttggtttcactggacaagac
tgctccaccaagacctgcccaaataactgcagcaacagaggaagatgtgtgaatggcaag
tgtgtgtgtaatcccggttttgctatgccggactgcagtgagtgtaaggacggacttaca
ggacctgactgcgcaacagccctcattgctgtgtcttacctcagtgccagaaacatcact
gaatcttcagttacactcttctggactccacctgtagtgcagtacaacacgtaccgtatc
accttcatcagtgagaaagaaagcgatcagaagatcacatccatggtgaacggcggattc
agcacctacactcaggtgggcctggctccgggacagcggtacaccgtgaccatcactggg
gagaaagatggcaagatgggcgccaaaagcacgacaacattccagactttgatctctggc
cccaaaaatcttcaagtcgtcaagacaagcacaacatctgtcatcgtccaatgggaggaa
gcacagggagacattgacagatacatactctccatttccccaaatcagacagatggatct
ggccagggaagccaagagatgaggttaccacccgggagagactctgcccagatcgatggc
ctggagcctggtcgtttgtatgacatttctctagttgcagaaagaggtggcactcggagc
ctgccggcgaccgtgcaagcaacccctggtcctgagcctccctcacacctctcctttagt
gacataactgacacgtcactcactgtgtcatggagacgaccaaaaagctctgtgtctagg
tttaaggtcacgtacatgcacactaaagaaggagagccaatctcagtgacggtggactca
tcaaccaccactctgtctctgaccaagctttccccgggatctacttatgaggtcagcgtc
atctctgtgctcggattggacgagagcgacccagtcaaggacttcgtgattacactgccc
gacccaccaaccgacctcagggccataaacatcacagataccaaggcactgttgctatgg
agacctgccctggcaaccgtcgaccagtacatcatcacttaccactctgaggaagctcct
ggctcagagttaagcgtcagagtgtcgggtaacgcagtggaagagcagcttcaggctcta
aagccttccaccaagtacaaggtcaccatcatcagccggctgggagaacagaaaagttcc
agcacacacagcaccttcactacggccagcggctctcctggaaagggggagggacctcgg
gacctgacagccaaacacgtaactgcacatactgctgtgttgtcatggaaaccaccagct
tcagctgtgacaagctacaaactgacgtacttcaccaagggtggagagcgcaaggaagtg
acccttaaccctggagttactgaacataagctgagtgggttgcgtccctcgtctatgtat
acagcactactgcagggtgagagaggtggcgtctacaccgcggccatctccaccgagttc
actacaggaactctgcgcttcccgtacccctctgactgctctcagcagctgatgaatgga
cagacggagtcgggtttggtggagattttccccggagggaatcagggacaacctgtcatg
gtttactgcgatatggagacagacggaggaggctggacggtcttccagagacgaagtgat
gggaaaaccaacttcttcagaaactggcaggagtacaggaagggcttcggagatctggag
ggagagttctggcttggaaacgacttcctccacaacctcactacaatgactcccatgaat
atgagggtggacttgagatcaggagacgagtctgtctatgcacactactccacgttctcc
gtggacactatgaagaagcactacatgatgcgagtgtctggatactcgggcacagccggc
gactctctgaggtaccacgataaacggccgttctccacgttcgaccgcgaccctcagccc
ttcatcacacgctgtgccatgtcatacagagggggctggtggtacaaaaactgccacgag
gctaatctcaacggcctgtacaacacacacaccaaccatcagggtgtgatctggaccgca
tggaaagggaagaaattctccatcccgttcacagagatgaaactccgcccagcctccttc
aaagcacacggtcagggatga
DBGET
integrated database retrieval system