Ictalurus furcatus (blue catfish): 128617987
Help
Entry
128617987 CDS
T09387
Symbol
cntn1a
Name
(RefSeq) contactin-1a isoform X1
KO
K06759
contactin 1
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128617987 (cntn1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ifu04515
]
128617987 (cntn1a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ifu00537
]
128617987 (cntn1a)
Cell adhesion molecules [BR:
ifu04515
]
Immunoglobulin superfamily
Contactins
128617987 (cntn1a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ifu00537
]
Others
128617987 (cntn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
V-set_CD47
Sp38
Pur_ac_phosph_N
C2-set_2
Interfer-bind
DUF4998
PAXX
Motif
Other DBs
NCBI-GeneID:
128617987
NCBI-ProteinID:
XP_053497277
LinkDB
All DBs
Position
14:complement(21724025..21792504)
Genome browser
AA seq
1028 aa
AA seq
DB search
MCHLTPLLLALSLALSSSPAYGDAAGIFDDSSGYGPVFEEQPFDTIYPEESQEDKIIMSC
RARASPPATYKWRLNGLDIENLEEGNTDYSLMGGNLVISRPDKTSHAGNYSCLATNEFGT
VISREASLQFGYLDMFSTEEREAVRVKEGQGVVLLCAPPPHSPDDLTFRWMLNEFPIFIP
LDKRRFVSQTTGNLYIAKVEASDSGNYSCFVSSLSIAKSVFSKFIPLVPQTERSIRKYAA
DIKVQFPDTYALVGQNITLECFALGNPIPQIKWRKVDGALPVHHEISMAGGLLRLFNVQY
EDEGVYECEALNSKGKDWHKANLYVEAAPEWVEQISSSERNIGSDYTMSCVASGKPKPHV
YFLKDGQMHDMHELRFTDLTSDDSGMYQCIAENRHGVIHANAELRVFEGAPSFEFNPVKQ
RLLAAKNGRVVIECKPKAAPRPTFSWSKGTELLSNSSRIFIWEDGSLEIRNVTKSDEGKY
TCFAENDRGKANSTGSLSVTDATKITLAPSNADVSVGENARMQCAASHDSSLDITFIWSL
NGHAIDKEEEYYQYTIDSQAGMSSCELLIKKTQLKHAGLYTCMAQTPVDNVTVSADLVVR
GPPGAPGGVRVEEVLAKSVKLFWSHGTDNLSPISKYTIQYRETRTEEEWKDAVTSPRNVE
GNAEMAMVVDLHPWTEYEFRVIATNTLGTGEPSEPSSKTITKEAAPVVAPSDVGGGGGTS
RELTITWTPVQPQYYYGKNFGYIIAFKPHNDTQWHRVTIADPRANHYIHKDPSTPPATKF
DVKVKAFNSAGEGPYSLTAVVYSAQDAPSEAPIIVEARTLSATEAIVWWRTLTQQTVEGY
QVRYWRKSVENEASAHRISSRENQTRLDNMKPNSHYVIEVRAFNGAGYGPASQRYEIHTK
KAPPSRPPKIIGTRVNSSGTLVNIAWQHVEALANESAVESYKVLYRQEGHSTGTLYTTNK
QSIDLPIHKDGDYLVEVRAQSKGGDGALARVRISDQLSVRPGKSIFTGLFSRFLSCDHFK
LDRILPAV
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcatctcacgcctctcctgctcgctctgtccctcgcactctcctccagtcctgca
tatggtgacgctgctggcatctttgacgattcctcaggctatggacctgtgtttgaggag
cagccctttgacaccatctaccccgaggagtctcaagaggacaagataatcatgagttgc
cgagcacgagccagcccacctgccacatacaagtggaggctgaatggcttggacattgag
aacctggaggagggtaacacagactacagcctgatggggggaaatctggtcatcagcaga
cctgataagaccagtcatgctgggaattactcctgcctggccacaaacgagttcggcacc
gtcatcagtcgagaggcgtctctccagtttggatatttagatatgttttccacagaggaa
agagaagccgtgcgtgtgaaagaaggtcagggagtggtgctgttatgtgctcctcctccg
cattccccagatgatcttaccttccgctggatgctgaatgaatttcccatcttcatcccg
ctggataagagacgcttcgtctctcagaccacaggaaatctgtatatcgctaaagtagag
gcttctgacagcgggaactactcctgcttcgtctccagcttatctatcgctaagagtgtc
ttcagcaagtttatccctttagtcccacagactgagcgttctattcggaaatacgcagcc
gatataaaagtgcagtttccagacacgtatgctcttgtcggccagaacatcaccctggag
tgtttcgcattaggaaatcccattcctcagatcaaatggaggaaggtggacggagcgctg
cctgtccatcatgagatcagcatggcaggtggacttctgcgcctctttaacgtgcagtat
gaggatgagggagtatacgagtgtgaggcactcaactctaaaggcaaagactggcacaaa
gcaaacctctatgtggaagctgctccggaatgggtggagcaaatcagcagcagtgagagg
aacatcggcagtgactataccatgtcctgcgtagccagtggaaaacccaaacctcatgtg
tatttcttgaaagacggccaaatgcatgacatgcatgagttgcgcttcacagacctgaca
tctgatgactcagggatgtatcagtgcattgctgagaaccgccatggagtgatccacgcc
aacgctgaattgcgagtctttgagggcgctccttcatttgagttcaacccggttaagcag
aggctgcttgcagcaaagaatggccgtgttgtgattgagtgcaaaccaaaagcagcaccc
agacccacgttttcctggagcaaaggcacagagctgctgtccaattccagcaggattttc
atttgggaggacgggagtctggagatccgaaacgttaccaagtcagatgaagggaagtac
acatgctttgctgagaacgaccgaggcaaagccaacagcactggatctctctcagtcaca
gatgccactaagatcacgctggctccctctaacgctgacgtgagcgtgggcgaaaacgct
aggatgcagtgtgcggcgtcacatgactcgagccttgacatcaccttcatctggtcactt
aacggccatgccattgacaaggaggaagagtactaccagtacaccattgatagtcaggca
ggtatgtctagctgtgagctgttaattaagaaaactcagctgaagcatgcaggcctgtac
acctgcatggcccagacacctgtggacaacgtcaccgtctctgctgacctggtagtgaga
gggcctccgggagctccaggaggagtgcgtgtggaggaggttttggcaaagtctgtgaag
cttttctggagtcatggcacagataatctcagccccatatccaaatacaccatccaatac
agagagaccagaaccgaggaggaatggaaagatgctgtaacctctcctcgcaatgtagaa
ggaaatgcagagatggccatggtagttgatctgcatccttggactgaatatgagtttcgg
gtcatcgctacgaacactctgggtacaggagaaccgagtgagccttcaagcaaaaccatc
acaaaggaagcagctcctgtggtggcaccctcagatgtaggaggaggtgggggaacaagt
agagagctcaccatcacatggacgcctgttcagccacaatactactatggcaagaacttt
ggctacattatcgcatttaagcctcataatgacactcagtggcatagagtgaccatagct
gaccctcgtgccaatcactacatccacaaagacccctctactccccctgccacaaagttt
gatgtgaaagtaaaggccttcaacagtgcaggagagggaccctacagtctcactgcagtt
gtatactctgctcaggatgcaccctcagaggctcccatcattgtagaggccagaaccctg
tcagcgacggaggccattgtgtggtggcgaacactcacgcagcagacagttgagggctat
caggtgaggtactggaggaagtctgtggagaacgaggcgtcagcacatcgcatctccagc
agagagaaccagacacgcctggacaacatgaagcctaactcccattatgttatagaagtg
cgtgcgttcaatggtgcaggttatggaccggcgagccagagatatgagatccacacaaag
aaagcacctccaagtcggccaccaaaaataatcggcacaagggtgaattccagtggaacc
ttagtcaatatcgcctggcagcatgtggaggctttagccaatgagtctgctgtggagagc
tataaggttctgtatagacaggagggtcacagcactgggacactgtacactacaaataag
cagtccatagacctgcccattcacaaagatggagattacctggtggaggtgagggcacaa
agcaagggaggagatggcgctttggctcgagtgcgcatctcagaccagctcagcgttaga
ccgggtaagtcaatatttacaggccttttctcacgctttctctcatgtgatcatttcaag
ttggatcgtatccttcctgcagtttga
DBGET
integrated database retrieval system
