Ictalurus furcatus (blue catfish): 128618218
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Entry
128618218 CDS
T09387
Symbol
neil1
Name
(RefSeq) endonuclease 8-like 1 isoform X1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
128618218 (neil1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ifu03400
]
128618218 (neil1)
Enzymes [BR:
ifu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
128618218 (neil1)
DNA repair and recombination proteins [BR:
ifu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
128618218 (neil1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neil1-DNA_bind
Fapy_DNA_glyco
H2TH
Motif
Other DBs
NCBI-GeneID:
128618218
NCBI-ProteinID:
XP_053497708
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All DBs
Position
14:17166289..17171838
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AA seq
417 aa
AA seq
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MPEGPELHLASVFVNTACAGVIFTGAVEKSEVSNGAEVLFSSDAYRISATSRGKEVRLTL
APIKTGTRSEGRAGLNQQAPMDVVFRFGMSGYFSFTATSERPKHAHLRFYTNEDPQRMLS
FVDTRRFGSWQPNGSWQKDRGPCVMLEYKSFRENVLSNLSDKAFNRPICEALLNQKYFNG
IGNYLRAEILYRSNIPPFVKARTVLEGLKAKHEETVNVKAEPSPEVAEKPGVDEKKIESP
DLLSLCHTVPLEVVNLGGKGYDPEKHDYTQFASWLQCYNVDGMKSVRDHNGRTMWFKGDA
GPMAPKASKSPRAKRKIKKDDHTDTKKEKIVKKDPGAGKREKDVPKKQSGTRRQNSSKTG
LEAEAADDGRRQKACRKNSSAGLRQTRATSTRGASVRNANTKAKATSKPLRKSSRIT
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagggtcctgagctgcacctggccagtgtgtttgtgaacacagcatgtgcaggt
gtgattttcaccggcgctgtggagaagtctgaggtgagtaatggagccgaggtgctgttt
tccagcgatgcttaccgaatcagcgccacgtccagaggaaaagaagtgcgactcacactc
gctccgatcaagactggcacccggagtgaaggcagagcaggcctgaaccaacaggcacct
atggatgtggtcttccggtttgggatgtcaggctatttcagcttcaccgccacatcagag
cgcccaaaacatgcccatctgcgattttacaccaacgaggatcctcagagaatgctgagc
ttcgttgatacccgcaggtttggcagctggcagcctaatgggagctggcagaaagaccga
ggaccctgcgtcatgcttgagtataagagcttcagggagaatgttttgtccaatttgtca
gacaaggcattcaacaggccaatctgtgaggctctcttaaatcagaaatacttcaacggg
attggcaactacctccgagcagagattctgtacagatccaatatccctccattcgtgaag
gcaaggactgtgttagagggactcaaagcaaaacatgaagagaccgtgaacgttaaagca
gaacccagcccagaggtggcagagaaacctggtgtggatgagaagaaaattgagagtcca
gacctcctctctctctgtcacactgtaccacttgaagtggttaatctgggtggaaaaggt
tatgacccagagaagcacgattacacacaatttgcttcctggctgcagtgttacaacgtt
gatgggatgaaatcagtgagagaccacaatggaagaactatgtggtttaaaggtgatgct
ggtccaatggcccctaaagcttccaaatctcccagggcaaagagaaaaataaagaaagat
gaccatacagatacaaagaaggaaaagattgtaaagaaggatccaggggctggcaaaagg
gagaaggatgtgcctaagaaacagagcggcactagacgacagaattccagcaagactgga
ctggaagcagaagcagctgatgatggcagaagacaaaaggcatgcagaaagaacagttca
gcaggtctacggcaaaccagagctacaagtacaagaggagcaagtgtacggaacgctaac
actaaagctaaggccaccagcaaacctcttaggaaaagcagtagaattacttaa
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