Ictalurus furcatus (blue catfish): 128618242
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Entry
128618242 CDS
T09387
Name
(RefSeq) DNA-binding protein RFX7
KO
K09175
DNA-binding protein RFX7
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128618242
Transcription factors [BR:
ifu03000
]
Eukaryotic type
Other basic domains
RF-X
128618242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX_DNA_binding
RFX5_N
Pox_D5
Motif
Other DBs
NCBI-GeneID:
128618242
NCBI-ProteinID:
XP_053497744
LinkDB
All DBs
Position
14:22007798..22034175
Genome browser
AA seq
1581 aa
AA seq
DB search
MLKLAPPPPPPPPPPPPPSPPPPCNNLTVMADDQQQQPGQLQQGALSGPASLPSALLSGL
QGTEATALHYDKIKNSICKSVQSKVDSILQDVEKFTDIEKLYLYLKLPSGPSSGNDKRTE
NQRGSTSPATCDQNSTSSSRTQQMYAFNWIRNHLEEHPETSLPKQEVYDEYKSYCDNLGY
HALSAADFGKIMKNVFPNMKARRLGMRGKSKYCYSGLRKKAFVHMPSLPNLDLHKAGDGC
ELLEPTGQSPSAEDEMRSAACGLVCEWAQKVLSRQFDSVEDLARFLLNSHYIGTKSMAAL
TVMTGTPTGVKTPTPASAFVPTGDTNSFQPQMKTLPSPSVDTKQQLQRKIQKKQQEQKLT
SPLPGDAQTRRAEAGTPGPGSSLASGSPALLSSQPAIGIVVAAVPSPITVQRNRQLMTSP
SPVTTTEGKVLPVNFQVVAQSVKQSPKTPQNIPASPVGDRLARHRYAQILPKPSATSGIT
LRSPPTLLITNSPIKTVMPTPHVSSVNVVKMTAISLTPNNSGGSNTPTPLRPASAGISST
VSHEESNQIQQAQNGSSAILQSSGAGRVCRPATTPIPSISSISEVKVTSEAVNDSNSSAG
AEKQSTGPGSNIGQKNERATKYRASSEPSLLVKASPVPERVARAKSDSATPPSTIIGAAV
PISNNSSVHQESTLYLTVMNQNADIGSNDTASPTGQSPKDAGLGLKSPRKRSASVLESHA
IPVKRVFISQQSLDASNNPKPSLVIATKKIQRPGTPARPESAPCKVTLKQNSLPTQILAL
SDTPIGNTSQIIISSQSSSQVEHGDSSAGISPTHIGSCNSTSSDQTLLQHIVSQHQVTIA
ISQEASAVSELKSSLQDYSQQIQAEQKQVTVSHLPLMAQPTEASSQLTLQQDIVDFDGAQ
ASIDYFPFNDDDMTQDSIVEELVQMEEQMKLNSSLQPYLTSLDIPLPGQSAQSTILSSHQ
TGTQFYHSAHSSTTPVHTPTPTPTPTPTPTPTPTSEILPGGHSLTRESPCCRVAPITPVD
GILGGRHTPISTPLSNCSSSVPPSPVECRNPFAFTPINSNITGYHDGSVVSSSPVKPMQR
PMATHPDKAKLDWINNRYNSTSGSPSVSNSNAIGILPSYQDLVEDHFRKPHAFAKPGQSF
QSQSRHQDGHLGRLTAVSPVQQGQQAVENKQESFAVPAPLDNKVTACTSGSGGGTFRCRS
VSPAVRQRNLSGTSVQTNPTPRSAVSPFNSPITSEVLSILSNSHSVVTANSMAQRSQSVP
LSIMMQSEMLPIGQQGQQSNSAKITSVLLSKMDADVDDTVRGLGVNNMPSKYTARMNLTQ
ILETTQAFPEGTNHHGQQLSVCSSPIQFDFQKPGFLISTEDESITFSSDDQAQSGSRLQQ
EQQLQLQDQQLELQDQQLLQDQQLQLQEQPLQLQDQQLELQDQHLQLQHQQLQLQDQQQL
QHDPDLSQQQLLSQSSQQDEEQQQQEQLDFNSTVKDLLGEDGLNPSSQLVGQVASELSAV
ASDFSSEIRLTSDLSGSINDLNTLDPNLLFDPSQQQDQYEDATLEELKNDPLFQQICSDT
VNSAGFDWLENKDQPTVEMLG
NT seq
4746 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagctcgcaccccctcctcctcctcctccaccaccaccaccacctccttctcct
cctcctccctgcaacaatctcaccgtgatggccgatgatcaacaacagcaacctggtcag
ctgcagcagggtgctctctccggaccggcgtctctccccagcgcgctgttgtcagggcta
cagggcaccgaggccaccgcgctgcactacgacaagatcaagaactcgatctgcaaatct
gtacaatcaaaagtggacagcattttgcaagatgttgagaagtttacagacattgaaaaa
ctctacctctaccttaagttgccttctggtcccagcagtggtaatgacaaaaggactgaa
aatcagagggggtctacaagtcctgcaacatgtgaccagaattccacgtcatccagtcgg
acccaacagatgtacgctttcaactggattcggaatcacttagaggagcatccggagacc
tcactgccaaaacaagaggtgtatgatgagtacaagagctattgtgacaatcttggctac
catgctctaagtgcggctgattttggaaagatcatgaaaaatgtctttccaaacatgaaa
gcacgtcgccttggaatgcgaggaaaatctaaatactgttatagtggactgcgaaaaaaa
gcttttgtgcatatgccatctttgcccaacctggacttgcataaagcaggagatgggtgt
gagctgttggagccaaccggtcagtctcccagtgctgaggatgagatgcgttctgcagcc
tgtggcttggtgtgtgaatgggcacagaaagttctgagccgccagtttgacagtgtggag
gatttagcgcgctttctactcaacagccactacattggcactaaatccatggctgcacta
actgttatgactggaaccccaacaggtgttaaaacgcccaccccggcctctgcgtttgtg
ccaactggtgacaccaactccttccagccccaaatgaagactctcccttcaccctctgta
gataccaagcaacagctacagcgaaagattcagaagaaacagcaagaacagaaacttact
tctccattgccaggtgatgcgcaaaccagaagagctgaagccggcaccccaggccctggg
tctagtctcgcctctggaagtccagctttgttgtcctcacagcctgcaataggtattgtg
gtggctgcagtaccaagccctatcacggttcagaggaatagacagttgatgacttctcca
agtccagttacgacaacagagggaaaagtattaccagtgaatttccaagtggtggcccag
tctgttaagcagtcccctaaaactccgcagaatattcctgccagtcctgttggtgatagg
ttagccaggcacagatatgcccagattctccccaaaccctctgccacaagtggcataact
cttcgttcccccccaacactccttattactaacagccctataaaaacagtgatgcccact
ccacatgtcagctcagttaacgttgtcaagatgactgctatatcattgacccctaacaat
agtggtggtagcaacactccaacaccattacgacctgcttcagctggtatcagtagcact
gtttcccatgaagagtctaaccaaattcagcaagctcagaacggcagctcagctattctg
cagtcatctggagctggaagagtgtgtcgtcctgccacaaccccaattccatccatttcc
tccattagtgaagtcaaggtaacatctgaagctgtgaatgatagtaactcctctgctggt
gcagaaaagcagagcactggaccagggagcaatattgggcaaaagaacgagagggccact
aaatatagggcttccagtgaaccttctcttcttgtcaaggcatccccagtgcctgaaaga
gttgctagagccaaaagtgactctgcaacacctccaagtacaatcataggggcagctgtc
ccaattagcaataacagcagtgttcatcaggagagtactttgtatctgactgttatgaat
cagaatgctgacattggatctaatgacacagcttccccaactggccagtcaccaaaagat
gctggtcttggattgaaaagtcctcgaaagcgctctgcttctgttttggagtctcatgca
atcccagttaagagggtgttcatatcccagcagtctttggatgccagtaacaatcctaaa
cctagtctcgttatagccacaaagaagatacagaggccaggaactcctgcgagaccagag
agtgctccatgtaaagttactctaaaacagaattcccttccaacccaaatcctggcactt
tcggatacaccaattggaaacacttctcagattattataagttctcagagttcttcacag
gttgagcatggggacagctctgctggaataagccctactcatataggctcttgtaatagc
acatcatctgatcaaactttattgcaacatattgtgagccagcaccaagttaccattgcc
atttctcaggaggcatctgctgtgagtgagctgaagagctcgttacaagactactctcaa
caaatacaggcagagcaaaagcaggtaactgttagccacttgccattgatggcccaacct
actgaagcatcttctcagttgactctccagcaagacattgttgactttgatggagctcaa
gccagcatagactatttccccttcaatgatgatgacatgacacaagatagcatagtagaa
gagttggtgcagatggaggagcaaatgaagctgaatagcagtctacagccttaccttact
tctcttgatatacccttaccaggccagtcagctcaaagcaccatcctttcctctcaccag
actggcactcagttctaccattctgcacatagtagcaccactccagtacacactccaacc
cccacaccaactccaacaccgacaccaactccaacccctacctctgaaatattgccaggg
ggccacagcttgaccagggaaagtccttgctgtagagtggcacctattaccccagtcgat
gggattttaggtggtcgacatacacctattagcactccattgtccaactgcagcagtagt
gtcccaccaagtcctgttgaatgccgtaatccctttgcatttacccccattaactccaac
ataacaggttatcatgatggcagtgtagtgtctagtagcccagtcaagcccatgcagaga
ccaatggccactcacccagacaaggccaagctggattggattaacaatagatataacagc
acttcaggttcaccatcagtttccaacagtaatgccattggaatccttccaagctatcag
gacctggtggaggaccactttcgtaagccacatgcatttgctaaaccagggcagtctttt
cagtctcaatccaggcaccaggatgggcatttgggtcgattaacagctgtgtcacccgta
caacaaggacaacaggcggtggagaacaagcaagaaagttttgctgtgccagcaccatta
gacaataaagttacagcttgtacatctgggagcggaggtggaacctttaggtgtcgcagt
gtgagccctgctgttcgtcagcgcaatctaagtggcacgtctgtgcaaactaaccctacc
ccaagatctgctgtttcaccattcaattctcccataacctcagaggttcttagcattctt
tccaacagtcattcagtggtcacggccaacagcatggcccaaaggagccagtcagtacca
ctaagcatcatgatgcagtctgagatgttgccaattggccagcagggacagcaaagtaat
agtgccaagatcaccagtgtgctcctgagcaaaatggacgcagatgtggatgatacagtg
cgtgggttgggtgttaataatatgccctccaagtacacagcccggatgaacctgacacag
atcttggagactacacaggccttcccagaaggcactaaccatcatggtcaacagctatct
gtctgttcaagccctatacagtttgacttccagaagcctggtttcctcataagcactgaa
gatgaatcaattactttttctagtgatgaccaagcacaatcaggctctcggctacaacaa
gagcagcagcttcaactacaggatcaacagttggaactacaggatcaacaactgttgcaa
gatcaacagttgcaacttcaggaacaaccattgcaactccaggaccaacaattggaatta
caagaccaacatttacaactgcaacaccaacaactgcagctacaagaccaacagcagcta
caacatgatccagacctcagccagcagcagttgctgtctcaatcctcacaacaggatgag
gaacagcagcagcaggagcaactggactttaacagcaccgtcaaggatctcttgggagag
gatggcctcaatcccagctcacaattggttgggcaggtggcatcagaactcagcgcagta
gcatctgacttttctagtgaaatccgtttgacttctgacctttctggtagcatcaatgac
ctgaacactttggatcccaaccttttgtttgatccaagtcagcaacaggaccaatatgaa
gacgccacactggaggagctgaagaacgacccgttgtttcagcagatatgcagtgacact
gtgaattctgctggatttgactggttggagaacaaagaccaaccaacagtagaaatgttg
ggttag
DBGET
integrated database retrieval system