Ictalurus furcatus (blue catfish): 128618330
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Entry
128618330 CDS
T09387
Symbol
snx1a
Name
(RefSeq) sorting nexin-1a
KO
K17917
sorting nexin-1/2
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128618330 (snx1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128618330 (snx1a)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ifu04990
]
128618330 (snx1a)
Membrane trafficking [BR:
ifu04131
]
Endocytosis
Macropinocytosis
Sorting nexins
128618330 (snx1a)
Domain-containing proteins not elsewhere classified [BR:
ifu04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
128618330 (snx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
Sorting_nexin
BAR_3_WASP_bdg
Pox_Ag35
Phage_T7_Gp13
Motif
Other DBs
NCBI-GeneID:
128618330
NCBI-ProteinID:
XP_053497851
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All DBs
Position
14:5876632..5888502
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AA seq
685 aa
AA seq
DB search
MAAGSERSPPPFPDSEDQDPEPELGEDEDSDEGADIFTGPALSRAPADPLVRVSAGEPPK
DVFSPALEDPLKDPSRAKSEPEKAAGGAAGVEVDLFADPLGESGAPPATDKNADPLKSEK
SSAARREIFGAPQNDVRKSEDIFEEPQEDGTITKTAPGPLGGAAGGKKAPSADLFGDDDD
DGADLFEEPLQVKKPLAKESSKGRADPSKDAAADLFTEKVVGVPAAAKPGPDPGSRTNGL
HSDEDDLFTEATVELSLDSPRNDHRKRQTQKTSAPASSLAASASVSKPQHKTLEEQEEEE
EKEDKFDLNISVTNPEKVGDGMNAYMAYKVSTQTTLPMFRTKQFTVRRRFSDFLGLYEKL
SEKHSQNGHIVPPPPEKSILGMTKVKVGKEDPSSAEFVERRRAALERYVQRLVCHPSLLQ
DPDVREFLEKEELPRAVSTQTLSGAGFLKMINKATDAVSKMTIKMNESDVWFEEKLQEVE
SEDQQLRKLHAMVESLVNHRKELSLSTAVFAKSVAMLGSSEDNTALSRALSQLAEVEDRI
EQLHQDQAANDFFIFAEHLADYIRLLVAVRACFDQRMKAWQRWQDAQNMLQKKRETEAKL
LWANKPDKLQQAKDEITEWESKVSQYERDFERVSATVRKEVLRFEKEQARDFKKQIVRYL
DSLLNSQQQLIKYWEAFLPEAKAIA
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggctcggagcgcagtccgcctccctttcccgactcagaggatcaggacccg
gagcctgagttaggcgaggacgaggacagcgatgaaggagcggacattttcaccggccct
gcgctctctcgtgcaccagcggatcctcttgttcgcgtgagcgccggtgagcctcctaaa
gacgtcttcagtccagccctagaagatcctctgaaagacccgagtcgggcgaagtctgaa
cccgagaaggccgctggaggagctgccggtgtggaggtcgacctgttcgccgatccttta
ggcgagtccggagctccgccggccactgacaaaaacgcagaccctctgaagagcgagaag
agttcagcggcacggcgcgagatctttggcgcacctcagaacgacgtcaggaagtccgag
gacatttttgaagagccgcaggaagacggtacgattactaaaacggcacccggacctcta
ggtggcgctgcaggtgggaagaaagcacccagcgccgacctgttcggagatgacgatgac
gacggtgccgatctgtttgaggagcctctgcaggtgaagaaacctctggcgaaggaaagc
agtaaagggcgtgctgacccgtctaaagacgccgctgctgacctctttaccgagaaggtc
gtcggagtccctgctgcggctaaaccgggcccggaccccggctccagaaccaacgggctg
cactcagacgaggacgatctgtttacagaggccaccgttgagctgtctctggacagtcct
cgtaatgaccaccggaagagacaaacacagaagacctcagcaccggcttcctctctcgcg
gcttcagcgagcgtctccaaacctcagcataaaacactagaggagcaggaggaggaagag
gagaaggaggacaaatttgatttgaacatttcagttacaaacccagagaaagtgggtgat
ggtatgaatgcctacatggcctacaaagtctccacacagacgacgttgcccatgttccgc
actaagcagttcacagtgcgcaggcgcttcagcgattttctgggtctctacgagaaactc
tcagaaaaacattcacagaatggacacattgtgcctccgccaccagagaagagcattctg
ggaatgaccaaagtgaaggtgggaaaggaagacccgtcatcagctgagtttgtcgaaagg
aggagagctgctcttgaaaggtacgtccaaagactcgtgtgtcatccgtctctgctgcaa
gaccccgatgtgagagagtttttagagaaagaggagttacccagggcagttagtacccag
acgctgagtggagccggattcctcaagatgatcaacaaggccactgacgcagtcagcaag
atgaccatcaagatgaacgagtcagacgtctggtttgaagagaagctgcaggaggtcgag
agtgaggaccaacagctgaggaagcttcacgctatggtggagtccctcgttaaccacagg
aaagagttgtctctgagcacagcagtgtttgctaagagcgtggcaatgttgggtagttcg
gaggataacaccgcgctctcacgagccctgtcccagctagccgaggtggaggaccgcatc
gagcagcttcatcaggaccaggctgctaatgacttcttcatcttcgccgagcatcttgca
gactacatccgcttgctggttgcagtcagggcttgctttgaccagcggatgaaggcgtgg
caacgctggcaagacgctcagaacatgctacagaagaaacgagagactgaggccaagctg
ctgtgggccaacaaacctgacaaacttcagcaagccaaggacgagatcacagagtgggag
tctaaggtcagtcagtacgagagagacttcgagagagtatccgccaccgtacgaaaggaa
gtcctccggttcgagaaagagcaggctcgggattttaagaaacaaatcgtcaggtatctg
gattctctgttgaattcacagcaacagctgatcaagtactgggaggcgttcttgccagag
gcaaaagcaattgcatga
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