Ictalurus furcatus (blue catfish): 128618336
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Entry
128618336 CDS
T09387
Symbol
lamb1a
Name
(RefSeq) laminin subunit beta-1a
KO
K05636
laminin, beta 1
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04510
Focal adhesion
ifu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128618336 (lamb1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128618336 (lamb1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
Alanine_zipper
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
128618336
NCBI-ProteinID:
XP_053497862
LinkDB
All DBs
Position
14:18933368..18956721
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AA seq
1782 aa
AA seq
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MIIHLAVLLCLGARSLAELPELGDVCTEGSCYPATGDLLIGRAHQLSATSTCGLEKTEPF
CIVSHLQEEKKCFLCDSRESFNETAHTTSHRIENVVTTFAPNRLKTWWQSENGMENVTLQ
LNLEAEFHFTHLIMTFKTFRPAAMVIERSADFGKTWQVYRYFAYDCESSFPSISRGPMKK
VDDVICDSRYSDIEPSTEGEVIFRVLDPAFRIDDPYSPRIQNMLKITNLRVKFTKLHTLG
DNLLDSRIEIKEKYYYAIYDMVVRGNCFCYGHASECAPVDGSGEVVDGMVHGHCMCNHNT
MGLNCELCQDFYHDLPWRPAEGRNTNACKKCNCHHHSTSCHFDMAVYHASGNVSGGVCND
CQHNTMGHHCEQCKPFFYQHPERDIRDPSICDPCDCDPIGSLNGGICDALTDVSLGLIAG
QCRCKPNVEGERCDQCKQGHYGLSNDPLGCKACTCNPVGTIPGGSPCDTISGNCYCKRLV
MGRDCDQCLPHHWGLSNDMDGCRPCDCDAGGALNNDCSPETGFCQCREHMSGRRCDQVES
GFYFIALDHYVYEAEDAKFGPGVTVVQRPYPQDRNPTWTGIGFVNVPEGAYLEFSIDNIP
LSMDYDILIRYEPQLPEQWEEVLMTVIRPHSITADSRCANTMPDDDNQVVSLHPGSRYVV
LPRSVCFEEGLNYTVRLSLPRYSTSSDIQSPYTLIDSIVLMPHCKNLDIFSGSGSEGGNL
VTNSAWDTFQRYRCLENSQSVVKTPMPDICMNYIFSVSALLHQGAKACACDPQGSLSTVC
DPNGGQCRCRPNVVGRNCDKCAPSTFLFGPQGCRPCECDPQGSVHAFCHEATGQCECIPR
AYGRQCDRCLPGHWGFPNCRPCTCNGHAEQCDPQTGQCLDCRDHTTGHSCERCLHGYYGD
PVLGSGDHCRPCMCPDGPGSSRQFAGACYLSHDSHQVYCVCNQGYKGARCDECAPGYYGN
PHEAGGECRPCQCSDNIDMMDPGSCDARTGVCLKCLYHTVGESCSHCKLGYYGDALTQNC
RRCVCNHMGTRQDTCPSVSECHCDQNNGQCQCLPNVVGQHCDLCAPDTWNMASGRGCEAC
DCDPNHSSSSACNEISGQCMCKPGFGGRTCRECRELFWGNPEVKCHACDCDPRGIAEQQC
NKATGHCLCEEGVSGPRCDTCARGYFGEFPHCERCHQCFAEWDVIIGDLTNQTHRLVQKV
NAIKSNGITGPYQDTINNMERSANSIRELLAQNPATQPLTEIQSLLEQATSLMAEMNEKL
NQTEELLSQSSDNSTDSKLETLSEEAQKLQRTVKDLQNQVEFMKNSDVQGALDSVKKYMK
ESEAAEGRVNASVSDRESPVEQSASLRNYTEAMINETKEEFEKKQDEHTKALDNLAGQLE
TLDLSELSEKTCGSRAGSEACADSPCGGLGCLDAEGNRKCGGEGCDGLTTLAHNAWQKTK
DFDQDIVSAMEEVDKLSKMVSEAKVKADEAKLNAQEVLQKTNETKKRVDNSNEELRRLIK
QIRDFLTQEGADLESIEAVANEVLQMQMPTTPAQLQNLTADIRERVASLSDVADILNQSA
ADIERAETLLEQARKARKEASNVKNTAELVQEALEQAEKAQTAVTEALKQATSDIKGTQD
LLVSVESETADSEFKLSNATQRLLQLEKDVTLLKEKALSTSTTAETTERDTDSVNKLAEQ
IKKDLDTELKDKYGTVEELITQKAQGVADAKKRAEMLQQEAKELLLQASDKLQLLKDLEK
SYDENQKTLEDKANQLVDLEKAVKELLQEISQKATIYSTCLF
NT seq
5349 nt
NT seq
+upstream
nt +downstream
nt
atgataatacatctcgcagtccttttgtgtttaggggcacggtcgttggccgagctgcct
gagcttggagatgtgtgcacggagggaagctgttacccagccactggagacctgcttatt
ggcagagcccatcagctctcagccacctccacctgtggcctggagaaaaccgaacctttc
tgcatcgtcagtcaccttcaggaagagaagaaatgctttttgtgcgactcgagggagtcc
ttcaatgagaccgcacatacaaccagccacagaatcgaaaatgtggtgaccacgtttgca
cctaatcgacttaagacttggtggcagtcagaaaatggcatggagaatgtgaccctccaa
ctgaacctggaagcagagttccacttcacccatctcatcatgaccttcaagaccttccgg
ccagctgccatggtgatcgagcgctcagctgactttggaaagacatggcaggtttaccgt
tactttgcctatgactgcgagtcctcctttccctcaatctctcggggccccatgaagaag
gtggatgatgtcatttgcgactctcgctattctgatattgaaccctctacagagggagag
gtcatctttcgagtattggacccagcattcaggattgatgatccttacagcccaaggatc
caaaatatgctgaaaattactaacctgagagtgaagtttactaagctgcacacactgggg
gacaatctgctggactcacgtattgagatcaaggagaagtactactatgccatttatgac
atggtggtgaggggcaactgcttctgctatggccacgcttctgagtgtgctcccgtcgat
ggatctggagaagtggtggatggaatggtccatggccactgtatgtgtaaccacaacacc
atggggctgaactgtgagctctgtcaggacttctaccatgacctgccctggaggcctgcg
gaggggcgtaacaccaatgcctgcaaaaaatgcaactgccatcaccacagtacctcatgc
cactttgacatggctgtgtaccacgcctcaggcaacgtcagtggaggagtgtgtaatgac
tgccagcacaacactatgggccaccattgtgagcagtgcaagccctttttctaccagcat
cctgagagggacattcgtgaccccagcatctgtgacccctgtgactgtgatcccattggc
tctctgaatggaggcatctgtgacgcactgacagatgtctctcttggactgatcgcggga
cagtgtcgttgtaagcccaatgttgagggggagcgttgtgaccagtgcaaacaaggccat
tatggccttagtaacgatcctctgggatgtaaagcttgcacctgtaatcctgttgggaca
atccctggtggaagcccttgtgatacaatttcagggaactgttattgtaagcgcttagtt
atggggagagactgtgaccagtgcttgcctcaccactgggggctcagcaacgacatggat
ggctgcaggccatgtgattgtgatgctggaggtgctctcaataatgattgttctccagag
acagggttctgtcagtgtcgggagcatatgtcaggcagacgctgtgaccaggtggagtcc
ggtttttacttcattgctctggaccattatgtttatgaggcagaagatgcgaagtttgga
cctggtgtgacagttgtgcagagaccatatcctcaggaccgcaatccaacctggactggt
attggctttgtgaatgttccagaaggagcttacctggagtttagcattgacaatatccca
ctttccatggactatgatatccttattcgctatgaaccccagcttccagagcagtgggag
gaagtactgatgactgtcatcaggcctcattccatcactgccgatagccgctgtgccaac
actatgccagatgatgacaaccaagtggtgtccttacacccgggttccaggtatgtggtg
ttacccaggtcagtgtgttttgaggaggggttgaactacacagtgcgtctaagtcttcct
cgctactccaccagcagtgacatccagtccccatacacactaattgactcaattgtgttg
atgccacactgtaagaacctggatatcttctctggttctggatcagagggaggtaacttg
gtgaccaacagtgcgtgggacacctttcagcgctaccgctgcttagagaacagccagtct
gttgtgaagacccccatgcctgacatctgcatgaactacatcttcagtgtgtctgctcta
ttgcatcagggagctaaagcttgtgcgtgtgaccctcagggttctcttagtacagtgtgt
gacccgaatggtggccagtgccgatgccggcccaacgtggttggcagaaactgtgacaag
tgtgccccttctactttcctgtttggacctcagggctgcagaccatgtgagtgcgatcca
cagggttcagtgcatgcattctgccatgaggccactggtcagtgtgaatgtattcccaga
gcgtatgggcgtcagtgtgatcgctgtctccctggacactggggcttccccaactgccgg
ccatgtacttgtaatggccatgcggagcagtgtgacccccaaacgggccagtgcttagac
tgtagggaccacaccactggacacagctgtgagagatgtttgcacggttattatggtgac
cctgtcctgggatctggagaccactgccgcccctgtatgtgtccagatggccctggcagc
agccgacagtttgctggagcatgctatcttagccatgactcacaccaggtgtattgtgta
tgcaaccagggctataaaggtgcaaggtgtgatgagtgtgcgccaggctactatggaaac
cctcatgaggctggtggagagtgtcgtccctgccagtgcagtgacaacatcgacatgatg
gacccaggatcttgtgatgcacgcacaggcgtctgcctcaaatgtctgtatcacacagtg
ggcgagagctgcagccactgcaagctgggttattatggtgatgcccttacacaaaactgc
agacggtgtgtgtgtaaccatatggggactaggcaggacacttgtccctctgtcagtgaa
tgccactgtgaccagaacaatgggcagtgccagtgcctgcctaacgtagttggacagcac
tgtgatttgtgtgccccagacacttggaacatggccagtggtagaggctgtgaggcctgt
gactgtgaccccaatcactcatccagctctgcctgcaatgagataagtggccagtgtatg
tgtaagcctggatttggaggaagaacatgcagggagtgcagagaactgttttggggtaac
cctgaagtcaaatgccatgcatgtgactgtgaccccagaggaattgctgagcagcagtgt
aacaaagccacaggacattgtttgtgtgaggagggcgtgtcgggcccccgctgtgacact
tgtgctcggggttactttggtgaattcccacactgtgaacgctgccaccagtgcttcgct
gaatgggatgtgatcataggagacctcactaaccagacacacagactggtgcagaaagtt
aacgccattaaatccaatggcatcacagggccctaccaagacaccatcaacaacatggag
aggagtgccaattccatccgtgagcttctggcccagaaccctgccactcagccgctcact
gagatccagagcctgctggaacaagctacatccttgatggctgaaatgaatgagaagttg
aatcagacagaggaactcttgtctcagagctctgacaacagcacagactcaaagctggaa
acactgagtgaagaagctcagaaactgcagcgcactgtaaaagacctgcaaaaccaagtt
gaatttatgaagaattcagatgtgcaaggagcattagacagtgtgaagaaatacatgaaa
gagtctgaagcagcagagggtcgtgtgaacgcctccgttagtgatcgcgagagcccggtg
gagcagtcagcctcactgcgcaattacacagaggccatgataaatgagactaaagaggag
tttgagaagaagcaagatgagcataccaaggcactggacaatctggctggccagcttgag
accctggacctgtctgaactcagtgagaagacttgtggcagccgtgctggctcggaggcg
tgtgctgactctccgtgtggaggtctgggctgtttggatgctgaaggtaacaggaagtgt
gggggagagggatgtgacggtcttaccacgttggcccataatgcctggcagaaaaccaag
gactttgaccaggatattgtcagtgccatggaggaggtggacaaactttccaagatggtg
tcagaagcaaaagtaaaagcagatgaggccaaactgaatgctcaagaagtgctgcagaag
accaatgagaccaagaagcgtgtggataacagcaacgaggagctgcgcaggctcatcaaa
cagatccgagacttcctcacccaagaaggagcagatctggagagcattgaggctgtggct
aacgaagtgctgcagatgcagatgcccactacgccggctcagctgcagaacctgacagca
gatattcgggagcgtgtggccagcctgtctgacgtggctgacatccttaaccagagcgct
gctgatattgagagagctgagaccctgctggagcaggcccgcaaagccagaaaagaggca
tctaatgtgaagaacacagctgagctggtacaggaagctctggaacaggcagaaaaagct
cagacagctgtgacggaggccttgaagcaggccactagtgacatcaagggaacacaggat
ctgcttgtatctgtagagtcagagacggcagattcagagttcaagctgagtaatgctacc
cagaggctacttcagctggaaaaggatgtgactcttttgaaagaaaaagccctcagcact
tccaccactgctgaaacgacagaaagagacacagacagtgtcaataagttggcagagcag
atcaaaaaggatctggacacagagctgaaggataagtacggtactgtggaggagctcatc
actcaaaaggctcagggtgtagcagatgctaagaaaagagctgagatgcttcaacaggaa
gccaaagagctgctgctgcaagctagtgacaaactacaacttctcaaagatttagaaaaa
tcctacgatgaaaaccagaagacactggaagacaaagccaaccagctggtggatctagaa
aaggctgtgaaagagttacttcaagaaattagccagaaagccaccatatacagcacctgt
ctgttttaa
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integrated database retrieval system