Ictalurus furcatus (blue catfish): 128618345
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Entry
128618345 CDS
T09387
Symbol
cnot2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128618345 (cnot2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128618345 (cnot2)
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128618345 (cnot2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
128618345 (cnot2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
128618345
NCBI-ProteinID:
XP_053497877
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All DBs
Position
14:19699697..19710862
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AA seq
545 aa
AA seq
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MDLARRQIVKIRQRPQTHLLKVTNGMFSATRKKFVEGVESDYPDESMYYGQPSMFPHRSE
KDMLASPSPSSSGQLSQLGASLYGPQSALGFSIRSMSNNNPQLSRSLTQGTQLPSHSTPT
TGVPTMSLHTPPSPNRGILPMNTRNMMNHSQVGQGMSLSGRTNSMGSSGLGSPNRSSPSI
ICMPKQQPARQPFTINSMSGFGMGRSQGFGMNSLSNNIFNGTDGSENVTGLDLSDFPALA
DRSRREGNGNPTPLHNPLAGRAPYVGMVTKPSTEQSQDFSIHNEDFPALPGPNYKDPTLS
TDESKSNLNSSTKSSSSADGPKFPGDKTSAQNNNQQKKGIQVLPDGKVTNIPSGMVTDQF
GMIGLLAFIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASAPCRPQDIDF
HVPSEYLTNIHIRDKLAAIKLARYGEDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEE
RVWITRAPGMEPTLKTNTYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHVPTTFNYNP
AQQAF
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggacttggctagacgccaaattgtgaaaattagacaacgcccgcagactcatcttctg
aaggtgacgaacggtatgtttagtgctacaagaaagaagtttgtagagggggtcgaaagc
gactaccctgatgagagtatgtactacggccagccgtcgatgttccctcatcgatcggag
aaagatatgctggcatctccttcgccgtcatcgtcaggtcaattgtcgcagcttggtgca
agtttgtatggcccccaaagtgcactaggcttctcaataaggagcatgagcaacaacaac
cctcagttaagccgcagtttaacacaaggtactcagttaccgagccatagcaccccaaca
acgggggtcccaacaatgtctctccatactccgccttcgccaaacaggggcattctgcct
atgaacaccaggaacatgatgaatcactcgcaagtgggccagggcatgagtctgagtggc
aggaccaacagtatgggaagctcaggccttgggagccccaaccgcagctcgcccagcatc
atctgcatgccaaagcagcagccggcgcgccagcccttcaccatcaacagtatgtcgggt
tttggaatgggtcgaagtcaggggtttggtatgaactctttatcgaacaacatctttaac
ggaacagatgggagtgaaaacgtgacaggactggacctctcggactttccagcattagca
gacagaagtcggagggaaggaaatggaaacccaacaccgttgcataatcccttggctgga
agggctccctatgttgggatggtcacaaagccgtcaactgaacagtcccaagatttctcg
attcacaatgaggattttcccgcactgcctgggcctaactacaaggatccaacgttgagc
acggatgaaagcaaatcaaacttgaactcctcaaccaagagcagctccagtgcagatggc
cccaagttcccaggtgataagacatcagcacagaacaacaaccagcagaaaaaggggatc
caggtgttgcctgatggcaaggtgacgaacattccttctggaatggtgacggatcagttt
ggaatgatcgggctgctagccttcatccgagcagctgaaacagaccctggaatggttcat
ctggcgttaggaagcgacctgaccacactgggactcaacctcaattctccagagaatctg
tatcccaagtttgcatctccttgggcctctgcaccatgccgaccacaggacatcgacttc
catgttccgtctgagtacttaaccaacattcatataagggacaagcttgctgcaataaaa
ctagcacgttatggggaggacctgctgttctacctctactacatgaacggaggagatctc
ttacaacttctggctgctgtggaactctttaaccgagattggaggtaccataaggaagag
agggtgtggattacaagagcacctggcatggagcctactctgaagaccaacacttatgag
agggggacgtactacttctttgattgtcttaactggaggaaagtcgctaaggagtttcac
cttgagtatgacaagcttgaggagcgacctcacgtaccaaccaccttcaactacaacccg
gcacagcaggccttctga
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