Ictalurus furcatus (blue catfish): 128618393
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Entry
128618393 CDS
T09387
Symbol
ush1c
Name
(RefSeq) harmonin
KO
K21877
harmonin
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ifu03037
]
128618393 (ush1c)
Cilium and associated proteins [BR:
ifu03037
]
Primary cilia and associated proteins
USH complex and associated proteins
128618393 (ush1c)
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GFIT
Motif
Pfam:
PDZ
USH1C_N
PDZ_6
PDZ_2
PDZ_Tricorn
Baculo_LEF5_C
AAA_23
Piezo_TM25-28
IQCJ-SCHIP1
Motif
Other DBs
NCBI-GeneID:
128618393
NCBI-ProteinID:
XP_053497944
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Position
14:complement(13792607..13819775)
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AA seq
556 aa
AA seq
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MERKVAREFRHKVELLIDNEAEKDYLYDVLRMYHKSMDLTVLVGDLKLVINEPNRLPLFD
AIRPLIPLKHQVEYDNLTPKRSRKLKEVRLDRTHPEGLGLSVRGGLEFGCGLFISQIVKD
GQAGTVGLQLGDEIVRINGYSISSCIHEEVVSLIKTKKTVSLKVRHVGMIPVKSSADEPL
KWQFVDQFVSESGEKKSSVAGLASIGGNEIKEKKVFLSLVGTKGMGISISSGPTQKPGIY
ISNVKPGSLSAEVGLQVGDQIVEVNGVEFSNVDHKEAVRVLKSSRSLTITVLTGAGKELF
MTDEEKLAVEARREIERQELMQQKRVAMETNKIMKEQQEKERLRRMEISQKAAEEEERYR
NEMEKIEAEEKKHNRQWEEDWGSREKSKSPSPVPSPSPPSRSPTPSKPRSSVLTCTAAEA
NTDEDEEIEGREGFQKYVDDFDPYSMFTPEQIEGKDVRLLRIKKEGPLDLAVEGGIDSPL
GKLVVSTVYQGGSADKHGGVVAGDEIMAVNGKILTDVTLTEGQNSLARAWNSGGDWIDLV
IAVSAPKEYEDEVTFF
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggagaggaaagtagctcgagaatttcgccataaggttgagttgctgattgataatgag
gcagaaaaggattacctgtatgatgttctgcgcatgtatcataagtctatggacctgact
gtcctggtgggggatttgaagctggtgattaacgaaccgaaccgcctgcccctgtttgat
gccatccggccgcttatccctctcaaacaccaggtggagtatgacaaccttacaccaaag
agatccaggaagctaaaggaagtgcgcttggaccgcacgcaccctgaaggcttgggtctg
agtgtacgaggtggcctagagtttggctgtggactcttcatctcacagattgtaaaggat
ggacaggctggaactgtgggcctgcagctgggggatgagattgtgcgcatcaatggctat
tcaatttcatcatgcatccatgaagaggttgtcagccttatcaagactaagaagactgtg
tcacttaaagtccgacatgtgggaatgattccagtaaagagttccgctgatgaacctctt
aaatggcaatttgtggatcagtttgtgtctgaatcaggggagaagaagagcagtgttgct
ggcctggcctccatcggaggaaatgagatcaaggagaaaaaggtgttcctcagcctggtt
ggcaccaaaggcatgggcatcagtatctcgagtggaccaactcaaaagccaggcatttat
atcagcaatgtaaagcctggctctctgtctgcagaagtgggccttcaggttggtgaccag
attgtcgaggtcaatggggtggagttcagtaatgtggaccacaaggaggcagttcgagta
ctgaagagcagcaggagtctaactatcacagtcctcactggagctggcaaagagttgttc
atgacagatgaggagaagctggcagtagaagctcggcgagagattgagcgccaggagctc
atgcaacagaaaagagtggcaatggagaccaacaaaatcatgaaagagcagcaggagaaa
gagcgtctgagaagaatggagatttcgcaaaaggctgcagaggaagaggaacgatacaga
aatgagatggaaaagattgaggctgaagagaaaaagcataacagacaatgggaggaagac
tggggttccagagagaagtccaaaagtccatctcctgtcccttctccttcacctccatca
cgttctccaactccttcgaaacccaggagctcagtcctgacctgtacagctgctgaagct
aacactgatgaagatgaagaaatagagggcagagaaggcttccagaaatatgtggatgac
ttcgatccctattcaatgttcacccctgagcagatagagggaaaagatgtgcggctgttg
agaattaagaaggagggcccactggatctcgctgtggaagggggaatagactctccactg
ggaaaacttgtggtttcaactgtttatcaaggaggctcagctgataagcatggtggagtg
gtggccggtgatgagattatggcagtaaatggaaaaatcctgacagatgtgaccctgact
gaagggcagaactctctagctcgggcctggaacagtggaggggactggattgaccttgtg
atagcagtttctgcaccaaaggaatatgaagatgaagtgacattcttctaa
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