Ictalurus furcatus (blue catfish): 128618449
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Entry
128618449 CDS
T09387
Symbol
sin3aa
Name
(RefSeq) SIN3 transcription regulator family member Aa
KO
K11644
paired amphipathic helix protein Sin3a
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
128618449 (sin3aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ifu03036
]
128618449 (sin3aa)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
128618449 (sin3aa)
REST complex
128618449 (sin3aa)
Heterochromatin formation proteins
Other heterochromatin formation proteins
128618449 (sin3aa)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
128618449
NCBI-ProteinID:
XP_053498020
LinkDB
All DBs
Position
14:complement(4765787..4796069)
Genome browser
AA seq
1268 aa
AA seq
DB search
MKRRLDDQDAGFAAQQRRLPGGPEGFQHRVLAPAPAVYEAVTDNVQPTSGLQYPVPQSYQ
VPAVAQSSGGHGHAPNPAAHSSSHHHNSAVQPHGPALVQSHGHPPNPTASAPGQQQFQRL
KVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMG
FNTFLPPGYKIEVQTNDLVNVTTPGQIHHITPHGISVQNIPLTSPAPHQSHLTAQASSTG
TAPSTQPSQKNKPSQSPALTPSSQPNPSIPPYASPRSPPLHPHTPISSTPNAPPLQNNQP
VEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYAQ
VARLFKNQEDLLSEFGQFLPDASSSVLLGKTTAEKAESVQNDHGSTVKKPQLNNKRPNQN
GCQIRRHSGSAATTPPVKKKPKLLNQKESSVAEASKHGVGTESLFFEKVRKALRCAEAYD
NFLRCLVIFNQEVISRAELVQLVLPFLGKFPELFTWFKNFLGYKEMSHLESYPKERATEG
IAMEIDYSSCKRLGFSYRALPKSYQQPKCTGRSPLCKEVLNDMWVSFPSWSEDSTFVSSK
KTQYEEHIYRCEDERFELDVVLETNLATIRVLESVQKKLSRMSAEEQAKFRLDNTLGGTS
EVIHRKAIHRIYGDKALDIIDGLKKNPAVSVPIVLKRLKLKEDEWREAQRGFNKIWRQQN
EKYYLKSLDHQGINFKQNDAKVLRSKTLLNEIESIYDERQEQVSEEAGTPASGPHLTFTY
EDRQILEDAAALIIHHVKRQTSIQKEDKYKIKQIIHHFIPDMLFSQRGALSDAEEEEEDE
EDAELDEGGSKKHNGVTGSPSKSKLLFANTPAQKLRSCDDAYSLFFVNNNWYIFLRLHQT
LCTRLLRLYSQAERQIEEELKERDWEREVLGLKRDKSDNPAVQLRLKEPMDIDVEDYYSA
FLEMVRNLLDGNMEASQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQVT
DLYLSESSSSATGGSLSTQTTRSAAESTYQRKAEQLMADENCFKLMFVKSRGNVQLTIEL
LDTEEENSDEQGDSERWADYLDRYLSADVMSPELREHLAQKPVFLPRNLRRIRKRQRGCE
QQEKDAKDGGKKENSENMKMECMFKLNSYKMVYVFKSEDYMYRRTALLRAHQSHEHVSTR
LHQRFQTWLDGWLKEHVSRDMAAETAKWLMGEGREGLIPCTTTCDPETLHFRNINKYRVK
YSSGFKTP
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcgtttggatgatcaggacgcgggctttgcggcacagcagcgcagacttcca
ggaggccccgaaggcttccagcacagggttctggctccagcgccggcggtgtacgaggct
gtgactgacaacgtgcagcccacctctggccttcagtaccctgtaccccagagctaccag
gttcctgctgtggctcagagctctggaggtcatggccatgctccaaaccctgctgcccac
agcagctcccatcaccacaactctgctgtacaaccacacggccctgcgctggtccagagt
cacggtcacccacccaaccccactgcctctgcacccggccagcagcagttccagagactc
aaggtggaggacgccctgtcctacctggaccaagtgaagctgcagtttggaagtcagcca
caggtttacaatgattttctggatatcatgaaagagtttaagtctcagagtattgacact
ccgggtgtgatcagtcgagtgtcccagctctttaagggtcaccccgacctcatcatgggc
ttcaacacctttctgccgcctggatacaaaatcgaggtgcagaccaacgacctggtgaac
gtcaccacgccggggcagatccaccacatcacaccacacggtatctcggtgcagaacatc
cccctgacaagtccagcaccgcaccagagccatctgactgcacaagcctccagtacaggc
actgctccctccacacagccttcacagaagaacaagccgtcgcagtctccagcactcacg
cccagcagtcagcccaatccgtccatcccaccatacgcctcgccccgttccccacctctc
cacccccacacccccatcagcagcacccccaacgcccccccactgcagaacaaccagcct
gtggagttcaaccacgccattaactatgtcaacaagatcaagaaccgtttccaaggccag
ccagacatctacaaagcctttctggagatcctgcacacataccagaaggagcaacgtaac
gctaaagaggcagggggaaactacacaccagccctgactgagcaggaggtttacgctcag
gtggcacggctcttcaagaaccaggaggacctgctctcagagttcggacagtttttacca
gatgccagcagctctgtgctgctgggcaagactacggcggagaaagccgaatctgtgcag
aatgatcatggaagtactgtaaagaaaccacagctgaacaacaagcggccgaaccagaac
ggctgtcagattcgcagacactctggttccgctgcaaccacaccaccagtaaagaaaaag
cctaagttactgaatcagaaggagtcttctgtagcagaagccagcaagcatggagtcggc
acggagtctctgttcttcgaaaaggtgcggaaagcattacggtgtgctgaggcttacgat
aacttcctgcggtgcctggtcatctttaaccaggaagtgatctcacgtgctgagcttgtg
caactggtgctgccattcctggggaagttcccagagttgttcacctggttcaagaacttc
ctgggctacaaggagatgtcccatttggagagctaccccaaagagcgggcaacagagggc
atcgccatggagatagactactcctcgtgcaagaggctggggtttagttatagagcactg
cctaagagctaccagcaacccaaatgcacagggagatccccgctatgtaaagaggtgctg
aacgacatgtgggtctcgtttccttcctggtcagaggactcgaccttcgtcagctcgaag
aagacgcagtatgaggagcacatctacaggtgcgaggacgaacgttttgagttggacgtg
gttttggagaccaacctagccactatccgggtgctggagtccgtgcagaagaagctctcg
cgcatgtccgcggaagaacaggccaagttccgactggacaacacgcttggcggcacttct
gaggtcatccaccgcaaggccatacacaggatatacggagacaaagctctagacatcatt
gatggactgaagaagaaccctgctgtctccgtccccatcgtacttaagaggttaaagctg
aaggaggacgagtggagagaagcgcagcggggcttcaataagatctggcgccagcagaac
gagaaatattatctcaagtccttagaccaccaaggcatcaacttcaagcagaacgacgcc
aaggtgctccgctccaagaccctcctcaacgagatcgagagcatttatgacgagcgccag
gaacaagtttcggaggaggcggggactccggcgagcggccctcacctcaccttcacctac
gaggaccggcagatcttggaggacgcggctgccctgattatccaccatgtcaagagacaa
accagcatccagaaagaggacaagtacaagatcaagcagatcatccaccacttcatccct
gacatgctgttctctcagcgaggtgctctgtccgatgccgaggaggaagaggaagacgag
gaggacgccgagctcgatgaaggaggctccaagaagcacaacggtgtcaccgggagtccc
agcaagtccaagctactgttcgccaacacaccggctcagaagctgcgctcctgcgacgac
gcctacagcctcttcttcgtcaacaacaactggtacatcttcctgcggctgcaccagacg
ctgtgcacgcgcctcctgcgcctgtatagccaagccgagcggcagatcgaggaggagctg
aaggagcgcgactgggagagggaggtgctcggtctcaaacgggacaaaagcgacaacccc
gccgtccagcttcggctcaaggagcctatggacatcgatgttgaagactactactccgcc
ttcctggagatggtgcgcaatttactggatgggaacatggaggcgtctcagtatgaggac
tccctgagagagatgttcaccatccacgcctacatcgccttcactatggacaaactcatc
cagagcatcgtcaggcagctacagcatatagtgagtgatgagatctgcgtgcaggtcaca
gatctgtatctgtccgagagcagcagcagtgccacaggtggctcgctctccacgcagacc
acgagatccgccgccgagtcgacctaccagcgcaaagctgagcagctcatggctgacgag
aactgctttaagctgatgttcgttaagagtcgaggaaacgtgcagctgacgatcgagctt
ttggacacggaagaggagaactcagatgagcaaggggattcggagcgctgggcggattac
ttggaccggtatcttagtgctgatgtgatgtcccccgagctaagagaacacctggcgcaa
aagcctgtttttcttccaagaaatctgcggcgaatccggaagcgtcagcggggatgtgag
cagcaggagaaggacgcaaaagatggcggaaagaaggagaactcggagaacatgaagatg
gagtgcatgttcaagctcaactcctacaagatggtgtacgtgtttaagtctgaggactac
atgtacagacgcaccgcactgctgcgagctcatcagtcacatgagcacgtgagcacgagg
ctgcaccagcgcttccagacctggctggatggatggctgaaggagcacgtgagccgggac
atggccgccgaaacggccaagtggctgatgggagaagggcgcgaagggctcataccctgc
actacgacctgcgacccagagacgctccacttcaggaacatcaacaagtacagagtgaaa
tacagcagtggcttcaaaacgccgtga
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integrated database retrieval system
