Ictalurus furcatus (blue catfish): 128618546
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Entry
128618546 CDS
T09387
Symbol
rfwd3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3 isoform X1
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ifu04121
]
128618546 (rfwd3)
Enzymes [BR:
ifu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128618546 (rfwd3)
Ubiquitin system [BR:
ifu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128618546 (rfwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
Beta-prop_WDR5
zf-C3HC4
WD40_CDC20-Fz
zf-RING_UBOX
Beta-prop_THOC3
Beta-prop_WDR3_1st
zf-rbx1
zf-C3HC4_2
Beta-prop_EML_2
zf-RING_5
WDR55
WD40
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
zf-RING_Vps41
zf-RING_11
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
zf-C3HC4_4
Rtf2
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_SPT8
zf-ANAPC11
zf-UDP
WD40_2
UPF0242
Rab11-FIP3
Myo5a
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Motif
Other DBs
NCBI-GeneID:
128618546
NCBI-ProteinID:
XP_053498166
LinkDB
All DBs
Position
14:20185229..20195305
Genome browser
AA seq
696 aa
AA seq
DB search
MEDMEVEVQFRPVGPADSVGLEVPIIIPDSGSSSDVEEDEEADRRPEGGSMAPTNRPRLA
TTQFVRRRRARAGLRFQYSTQTTHLNRGPLDFLLRVSAGSDTESLSGSTEEVSDSEEERQ
NRETSAPVPAIDVAAILNTSQPASLVSPPLQQSNATEPTVSAEADGAEPLVQSDNRADSA
PTEASKGASVSAAVTENEGEGETCSICFEPWTTSGEHRLATLRCGHLFGFTCIDRWLKGQ
GAKCPQCNKKAKRADIVLLYAHKLRAVDNTEQENLKRSLEQEQSLRRKAELESAQCRLRL
QVVTEECGKLRREVQELRRLMAQTPSSSNQSQTSALSQRHESSSRGNYVFSKAVLVSQAG
GCRVLSYCEPLSCLLASQPSPHASLVPGFGVKKISTVNLKASHYVPIHIKQIRGLAFNRQ
QDGLLLSAAFDNTIKLTSLFTNTVVQAYNAGKPVWSCCWCHDNNNYIYAGLSNGSVRVYD
TRDTSTHVQELAPLRSSCPVVSLSYLPRAASSLFPCGGLIAGSLEGGCFWEQVDGTTYRQ
HILPLESGGCTDIQVEPESRHCLVTYRPGRTNPSLRCVLMELNRSPQQDSAQAPVCSCSP
VQIFTAGSSSKLLTKNAVFKSPATDSTLVCAGDEGSNSTMVWDASSGALLQKLPADIPVM
DICPFETNQEHYLASLTEKMIKIYKWEQSGSERVSF
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggaagacatggaggtggaagtgcagttcagaccagtagggccagctgactctgttggt
ctggaggtccccatcatcatccctgactctggcagcagctcagatgtggaagaggatgaa
gaggcagacaggagacctgaaggaggaagcatggctcctactaacaggccacggctcgcg
acaactcagtttgtcaggagaaggagggctagagcaggtttgcggttccagtactcaaca
cagactacacatttgaacagaggccctttagactttctgcttcgggtgtcggcaggaagt
gacacagagtctctctcgggtagcacagaagaggtgagcgactctgaggaggagagacag
aacagagagacctcggctccagtacctgccatagatgttgcagctatactgaacaccagc
cagcctgcttctttggtctcccctcctcttcagcagtccaatgcaacagagcctaccgtt
tctgctgaagctgacggggccgaacctctagttcagtctgataacagggctgattcagca
cccacagaggcctctaaaggagcttctgtctcagctgctgtgactgagaatgaaggagag
ggcgagacctgctcgatatgtttcgaaccttggaccacatccggtgaacaccgtctcgcc
acgttgagatgtggccacttgttcggcttcacctgtattgaccgctggctgaagggccaa
ggagccaaatgcccccagtgcaataagaaggccaagcgggctgatatagtcttgttatat
gcacacaaactgagggcagtggataacacggaacaggagaatttaaagaggtctttggag
caggagcagagtttgcggaggaaggcggagctggaatctgctcagtgtcgtctccggttg
caggttgtaacagaggagtgtgggaaactccgccgagaggttcaggagctgaggaggtta
atggcacagacgccctccagctcgaatcagtctcagacctctgctctgtctcagagacat
gaatcttcaagcaggggaaattatgttttctccaaggccgtccttgtttctcaggctggt
gggtgtcgtgtgctgtcttactgtgagcccctcagttgcctgttggcttctcaaccttct
cctcatgcctctttggtccctggctttggggtgaaaaaaatcagcactgtgaatctcaaa
gccagtcattacgttcccatacacattaaacagatcagaggccttgccttcaacagacag
caagatggcctactgctttcagctgccttcgataatactatcaagctcaccagcttgttt
accaacactgtggtacaggcctacaacgctgggaaacctgtgtggagctgctgttggtgc
catgacaacaacaactacatttatgctgggctgagcaacggttcagtgcgggtgtacgac
acacgggacacgagcactcacgtgcaggagctcgcacctcttcgttccagttgtccagtt
gtatccctgtcctacctcccccgtgctgcctccagcttgttcccctgtggtggcctcatt
gctggctcccttgagggaggatgtttttgggagcaggtggatggaaccacgtatcgacag
cacattctgcctttagagtctggaggctgtacagacattcaggtggaacctgagagcaga
cattgtctggtcacttacagaccaggtcgtaccaacccatctttgcgttgtgttctgatg
gagcttaatcgaagccctcagcaggactctgcccaggctcctgtctgctcctgttctcct
gtccagatcttcactgctggctcgtcttccaagttgctcacgaagaacgccgtgttcaag
agtcctgctaccgactccactctggtttgtgcaggagatgagggctcgaattctaccatg
gtgtgggatgctagtagtggagccttgcttcagaaacttcctgcagacattccagtcatg
gacatctgcccttttgagacgaaccaggaacattacttggcttctctaactgagaagatg
attaagatctataaatgggagcagagtggttcagaaagagtgagtttctga
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